BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022814
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_201329.1| RNA recognition motif-containing protein [Arabi...   170   3e-40
ref|XP_002866661.1| polyadenylate-binding protein family protein...   169   4e-40
gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]             169   5e-40
ref|XP_002525843.1| poly-A binding protein, putative [Ricinus co...   169   5e-40
ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co...   169   6e-40

>ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
           gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding
           protein II-like [Arabidopsis thaliana]
           gi|10178188|dbj|BAB11662.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|23197620|gb|AAN15337.1| poly(A)-binding protein
           II-like [Arabidopsis thaliana]
           gi|332010647|gb|AED98030.1| RNA recognition
           motif-containing protein [Arabidopsis thaliana]
          Length = 220

 Score =  170 bits (430), Expect = 3e-40
 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180
           RSVFVGNVDY CT EEVQQHFQ+CG V RVTI TDK GQP GFAYVEFVE+E+VQ+ALQL
Sbjct: 92  RSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQL 151

Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRR--FHPYMGHP 324
           N+SELHGRQLKV+ KRTN+PG+KQFR RRFNPYMG   RR    PYM  P
Sbjct: 152 NESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSP 201


>ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata
           subsp. lyrata] gi|297312496|gb|EFH42920.1|
           polyadenylate-binding protein family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 220

 Score =  169 bits (429), Expect = 4e-40
 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180
           RSVFVGNVDY CT EEVQQHFQ+CG V RVTI TDK GQP GFAYVEFVE+E+VQ+ALQL
Sbjct: 92  RSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQL 151

Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRR--FHPYMGHP 324
           N+SELHGRQLKV+ KRTN+PG+KQFR RRFNPYMG   RR    PYM  P
Sbjct: 152 NESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSP 201


>gb|AEO32283.1| hypothetical protein [Amblyomma maculatum]
          Length = 207

 Score =  169 bits (428), Expect = 5e-40
 Identities = 82/105 (78%), Positives = 92/105 (87%)
 Frame = +1

Query: 1   RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180
           RSVFVGNVDY+CT EEVQQHFQSCG V RVTI TDK GQP G+AYVEF+E+E+VQ+ALQL
Sbjct: 89  RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEVEAVQEALQL 148

Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRRFHPYM 315
           N+SELHGRQLKV AKRTN+PGMKQ+R RRFNPY+G   RR  PYM
Sbjct: 149 NESELHGRQLKVSAKRTNVPGMKQYRMRRFNPYIGTRYRR--PYM 191


>ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis]
           gi|223534848|gb|EEF36537.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 198

 Score =  169 bits (428), Expect = 5e-40
 Identities = 83/110 (75%), Positives = 92/110 (83%), Gaps = 2/110 (1%)
 Frame = +1

Query: 1   RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180
           RSVFVGNVDY+CT EEVQQHFQSCG V R+TIRTDK GQP G+AYVEF+E E+VQ+AL L
Sbjct: 70  RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEPEAVQEALLL 129

Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPR--RFHPYMGHP 324
           N+SELHGRQLKV AKRTN+PGMKQFRPRR NPYMG  PR  +  PY   P
Sbjct: 130 NESELHGRQLKVTAKRTNVPGMKQFRPRRPNPYMGFAPRGSQLPPYFYSP 179


>ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis]
           gi|223528706|gb|EEF30719.1| poly-A binding protein,
           putative [Ricinus communis]
          Length = 218

 Score =  169 bits (427), Expect = 6e-40
 Identities = 81/105 (77%), Positives = 91/105 (86%)
 Frame = +1

Query: 1   RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180
           RSVFVGNVDY CT EEVQQHFQSCG V RVTI TDK GQP GFAYVEF+E+E++Q+AL L
Sbjct: 90  RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLL 149

Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRRFHPYM 315
           N+SELHGRQLKV+ KRTN+PGMKQ+RPRRFNPYMG   RR  PY+
Sbjct: 150 NESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRFRR--PYV 192