BLASTX nr result
ID: Coptis25_contig00022814
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022814 (684 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_201329.1| RNA recognition motif-containing protein [Arabi... 170 3e-40 ref|XP_002866661.1| polyadenylate-binding protein family protein... 169 4e-40 gb|AEO32283.1| hypothetical protein [Amblyomma maculatum] 169 5e-40 ref|XP_002525843.1| poly-A binding protein, putative [Ricinus co... 169 5e-40 ref|XP_002531675.1| poly-A binding protein, putative [Ricinus co... 169 6e-40 >ref|NP_201329.1| RNA recognition motif-containing protein [Arabidopsis thaliana] gi|14423494|gb|AAK62429.1|AF386984_1 poly(A)-binding protein II-like [Arabidopsis thaliana] gi|10178188|dbj|BAB11662.1| poly(A)-binding protein II-like [Arabidopsis thaliana] gi|23197620|gb|AAN15337.1| poly(A)-binding protein II-like [Arabidopsis thaliana] gi|332010647|gb|AED98030.1| RNA recognition motif-containing protein [Arabidopsis thaliana] Length = 220 Score = 170 bits (430), Expect = 3e-40 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 2/110 (1%) Frame = +1 Query: 1 RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180 RSVFVGNVDY CT EEVQQHFQ+CG V RVTI TDK GQP GFAYVEFVE+E+VQ+ALQL Sbjct: 92 RSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQL 151 Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRR--FHPYMGHP 324 N+SELHGRQLKV+ KRTN+PG+KQFR RRFNPYMG RR PYM P Sbjct: 152 NESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMSPYMYSP 201 >ref|XP_002866661.1| polyadenylate-binding protein family protein [Arabidopsis lyrata subsp. lyrata] gi|297312496|gb|EFH42920.1| polyadenylate-binding protein family protein [Arabidopsis lyrata subsp. lyrata] Length = 220 Score = 169 bits (429), Expect = 4e-40 Identities = 84/110 (76%), Positives = 92/110 (83%), Gaps = 2/110 (1%) Frame = +1 Query: 1 RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180 RSVFVGNVDY CT EEVQQHFQ+CG V RVTI TDK GQP GFAYVEFVE+E+VQ+ALQL Sbjct: 92 RSVFVGNVDYACTPEEVQQHFQTCGTVHRVTILTDKFGQPKGFAYVEFVEVEAVQEALQL 151 Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRR--FHPYMGHP 324 N+SELHGRQLKV+ KRTN+PG+KQFR RRFNPYMG RR PYM P Sbjct: 152 NESELHGRQLKVLQKRTNVPGLKQFRGRRFNPYMGYRFRRPFMPPYMYSP 201 >gb|AEO32283.1| hypothetical protein [Amblyomma maculatum] Length = 207 Score = 169 bits (428), Expect = 5e-40 Identities = 82/105 (78%), Positives = 92/105 (87%) Frame = +1 Query: 1 RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180 RSVFVGNVDY+CT EEVQQHFQSCG V RVTI TDK GQP G+AYVEF+E+E+VQ+ALQL Sbjct: 89 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRVTILTDKFGQPKGYAYVEFLEVEAVQEALQL 148 Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRRFHPYM 315 N+SELHGRQLKV AKRTN+PGMKQ+R RRFNPY+G RR PYM Sbjct: 149 NESELHGRQLKVSAKRTNVPGMKQYRMRRFNPYIGTRYRR--PYM 191 >ref|XP_002525843.1| poly-A binding protein, putative [Ricinus communis] gi|223534848|gb|EEF36537.1| poly-A binding protein, putative [Ricinus communis] Length = 198 Score = 169 bits (428), Expect = 5e-40 Identities = 83/110 (75%), Positives = 92/110 (83%), Gaps = 2/110 (1%) Frame = +1 Query: 1 RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180 RSVFVGNVDY+CT EEVQQHFQSCG V R+TIRTDK GQP G+AYVEF+E E+VQ+AL L Sbjct: 70 RSVFVGNVDYSCTPEEVQQHFQSCGTVNRITIRTDKYGQPKGYAYVEFLEPEAVQEALLL 129 Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPR--RFHPYMGHP 324 N+SELHGRQLKV AKRTN+PGMKQFRPRR NPYMG PR + PY P Sbjct: 130 NESELHGRQLKVTAKRTNVPGMKQFRPRRPNPYMGFAPRGSQLPPYFYSP 179 >ref|XP_002531675.1| poly-A binding protein, putative [Ricinus communis] gi|223528706|gb|EEF30719.1| poly-A binding protein, putative [Ricinus communis] Length = 218 Score = 169 bits (427), Expect = 6e-40 Identities = 81/105 (77%), Positives = 91/105 (86%) Frame = +1 Query: 1 RSVFVGNVDYTCTSEEVQQHFQSCGLVTRVTIRTDKSGQPMGFAYVEFVEIESVQQALQL 180 RSVFVGNVDY CT EEVQQHFQSCG V RVTI TDK GQP GFAYVEF+E+E++Q+AL L Sbjct: 90 RSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFLEVEAIQEALLL 149 Query: 181 NDSELHGRQLKVVAKRTNIPGMKQFRPRRFNPYMGGHPRRFHPYM 315 N+SELHGRQLKV+ KRTN+PGMKQ+RPRRFNPYMG RR PY+ Sbjct: 150 NESELHGRQLKVLPKRTNVPGMKQYRPRRFNPYMGYRFRR--PYV 192