BLASTX nr result

ID: Coptis25_contig00022810 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022810
         (432 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002310962.1| predicted protein [Populus trichocarpa] gi|2...   137   9e-31
emb|CBI29132.3| unnamed protein product [Vitis vinifera]              133   2e-29
ref|XP_002274914.1| PREDICTED: uncharacterized protein LOC100255...   133   2e-29
gb|ABV89667.1| hypothetical protein at5g04910 [Brassica rapa]         123   2e-26
ref|XP_002526323.1| hypothetical protein RCOM_0720210 [Ricinus c...   117   1e-24

>ref|XP_002310962.1| predicted protein [Populus trichocarpa] gi|222850782|gb|EEE88329.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score =  137 bits (345), Expect = 9e-31
 Identities = 66/97 (68%), Positives = 81/97 (83%)
 Frame = -1

Query: 291 SKSKSSKVESQLKRFLDIQQRRAQSYGKLKRGFTEYIVGGGDSGYQQLCSEITQEFSDCS 112
           S SKSS     L+RFL+IQ+RRAQ+Y KLK+GF+EY+V GG+  YQQLCS+IT+EF+DCS
Sbjct: 31  SSSKSSNTLLLLRRFLEIQERRAQAYAKLKQGFSEYMVSGGELAYQQLCSKITEEFNDCS 90

Query: 111 KQVLEIESLFLNPDFSRNDLACLLRSVQTHEKQKLHM 1
           KQV+E+ESLFLNPD  R DLA LLR +QT EKQKLH+
Sbjct: 91  KQVIEMESLFLNPDHDRVDLAHLLRDIQTQEKQKLHL 127


>emb|CBI29132.3| unnamed protein product [Vitis vinifera]
          Length = 190

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/93 (67%), Positives = 78/93 (83%)
 Frame = -1

Query: 279 SSKVESQLKRFLDIQQRRAQSYGKLKRGFTEYIVGGGDSGYQQLCSEITQEFSDCSKQVL 100
           SSK    L+RFL IQQRRAQ+Y  ++RGF +Y+V GG+S YQQLC+EIT EF++CSKQVL
Sbjct: 9   SSKTLQLLRRFLQIQQRRAQAYANMRRGFADYMVSGGESAYQQLCNEITVEFNECSKQVL 68

Query: 99  EIESLFLNPDFSRNDLACLLRSVQTHEKQKLHM 1
           E+ESLFL+PD+ R+DLA LLRSVQ  EKQKLH+
Sbjct: 69  EMESLFLDPDYGRDDLAHLLRSVQNQEKQKLHL 101


>ref|XP_002274914.1| PREDICTED: uncharacterized protein LOC100255669 [Vitis vinifera]
           gi|147819625|emb|CAN69816.1| hypothetical protein
           VITISV_026899 [Vitis vinifera]
          Length = 203

 Score =  133 bits (334), Expect = 2e-29
 Identities = 63/93 (67%), Positives = 78/93 (83%)
 Frame = -1

Query: 279 SSKVESQLKRFLDIQQRRAQSYGKLKRGFTEYIVGGGDSGYQQLCSEITQEFSDCSKQVL 100
           SSK    L+RFL IQQRRAQ+Y  ++RGF +Y+V GG+S YQQLC+EIT EF++CSKQVL
Sbjct: 22  SSKTLQLLRRFLQIQQRRAQAYANMRRGFADYMVSGGESAYQQLCNEITVEFNECSKQVL 81

Query: 99  EIESLFLNPDFSRNDLACLLRSVQTHEKQKLHM 1
           E+ESLFL+PD+ R+DLA LLRSVQ  EKQKLH+
Sbjct: 82  EMESLFLDPDYGRDDLAHLLRSVQNQEKQKLHL 114


>gb|ABV89667.1| hypothetical protein at5g04910 [Brassica rapa]
          Length = 196

 Score =  123 bits (308), Expect = 2e-26
 Identities = 62/103 (60%), Positives = 78/103 (75%), Gaps = 5/103 (4%)
 Frame = -1

Query: 294 CSKSKSSKVESQ-----LKRFLDIQQRRAQSYGKLKRGFTEYIVGGGDSGYQQLCSEITQ 130
           C  S SS V S      L+R L+IQ+RRAQ+Y KLKRGF+EY+   G++ YQ+LCSEIT 
Sbjct: 5   CGGSSSSTVGSSRTLVLLRRLLEIQERRAQAYAKLKRGFSEYVETSGEALYQKLCSEITA 64

Query: 129 EFSDCSKQVLEIESLFLNPDFSRNDLACLLRSVQTHEKQKLHM 1
           EF++CSKQV E+E+LFLNPD  R+DLA LL  +QT EKQKLH+
Sbjct: 65  EFNECSKQVREMETLFLNPDVGRSDLAQLLSDIQTQEKQKLHL 107


>ref|XP_002526323.1| hypothetical protein RCOM_0720210 [Ricinus communis]
           gi|223534350|gb|EEF36059.1| hypothetical protein
           RCOM_0720210 [Ricinus communis]
          Length = 221

 Score =  117 bits (293), Expect = 1e-24
 Identities = 63/93 (67%), Positives = 70/93 (75%)
 Frame = -1

Query: 279 SSKVESQLKRFLDIQQRRAQSYGKLKRGFTEYIVGGGDSGYQQLCSEITQEFSDCSKQVL 100
           SS     L+RFL IQQRRAQ+Y  LKRGF EY+V GG+  YQQLCSEIT EFSDCSKQVL
Sbjct: 19  SSNTLLLLRRFLHIQQRRAQAYANLKRGFDEYMVSGGELAYQQLCSEITLEFSDCSKQVL 78

Query: 99  EIESLFLNPDFSRNDLACLLRSVQTHEKQKLHM 1
           E+E LF N    R DLA LLR+VQT EK KLH+
Sbjct: 79  EMEGLFQN---YRLDLAQLLRAVQTQEKHKLHL 108


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