BLASTX nr result

ID: Coptis25_contig00022796 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022796
         (771 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263171.1| PREDICTED: uncharacterized protein LOC100246...   133   4e-29
gb|AFK47675.1| unknown [Medicago truncatula]                          132   6e-29
ref|XP_003610222.1| hypothetical protein MTR_4g129320 [Medicago ...   132   1e-28
ref|XP_002534461.1| conserved hypothetical protein [Ricinus comm...   128   2e-27
gb|AEO36400.1| hypothetical protein [Amblyomma maculatum]             125   1e-26

>ref|XP_002263171.1| PREDICTED: uncharacterized protein LOC100246766 [Vitis vinifera]
           gi|297736053|emb|CBI24091.3| unnamed protein product
           [Vitis vinifera]
          Length = 144

 Score =  133 bits (335), Expect = 4e-29
 Identities = 71/114 (62%), Positives = 89/114 (78%), Gaps = 1/114 (0%)
 Frame = -2

Query: 665 GMQSGQYPTVRSLVTSRSN-GTAFRVLVNSNVSPGKGNYRGNVKDAIMVDPLEAKRLAAK 489
           G++ GQ  ++    T+ S  G AF++L N NVS GKGN   + K+ +MVDPLEAKRLAAK
Sbjct: 28  GLRRGQDASLVIPRTAHSTRGQAFQILANPNVSAGKGN---SDKEVVMVDPLEAKRLAAK 84

Query: 488 QMQEIQAEDKLKRQRRIEAINGAWAMIGLTAGLVIEGRTGDSIPAQLEGYWRSL 327
           QMQE +A++KLKR+RRIEAINGAWAM+GLTAGLVIEG TG+ I AQL GYW ++
Sbjct: 85  QMQEFKAKEKLKRRRRIEAINGAWAMLGLTAGLVIEGHTGNGILAQLAGYWGAI 138


>gb|AFK47675.1| unknown [Medicago truncatula]
          Length = 143

 Score =  132 bits (333), Expect = 6e-29
 Identities = 72/122 (59%), Positives = 94/122 (77%), Gaps = 1/122 (0%)
 Frame = -2

Query: 683 PTTLRWGMQSGQYPTVRSLVTSRSNGTAFRVLVNSNVSPGKGNYRGNVKDAIMVDPLEAK 504
           PTT++WG +  Q     S+ ++R+   AFRVL N NVS GK    G+ KD IMVDP+EAK
Sbjct: 25  PTTVKWGWRREQDA---SMASNRTQSQAFRVLANPNVSSGKD---GSKKDVIMVDPVEAK 78

Query: 503 RLAAKQMQEIQAEDKLKRQRRIEAINGAWAMIGLTAGLVIEGRTGDSIPAQLEGYWRSL- 327
           RLAAKQM+ I+A++KLK++R+IEAINGAWAMIGLTAGLVIEG+TG +I  QL+ Y+ ++ 
Sbjct: 79  RLAAKQMEIIKAKEKLKKRRQIEAINGAWAMIGLTAGLVIEGQTGKNIITQLQDYFGAIV 138

Query: 326 HF 321
           HF
Sbjct: 139 HF 140


>ref|XP_003610222.1| hypothetical protein MTR_4g129320 [Medicago truncatula]
           gi|355511277|gb|AES92419.1| hypothetical protein
           MTR_4g129320 [Medicago truncatula]
           gi|388516053|gb|AFK46088.1| unknown [Medicago
           truncatula]
          Length = 143

 Score =  132 bits (331), Expect = 1e-28
 Identities = 72/122 (59%), Positives = 93/122 (76%), Gaps = 1/122 (0%)
 Frame = -2

Query: 683 PTTLRWGMQSGQYPTVRSLVTSRSNGTAFRVLVNSNVSPGKGNYRGNVKDAIMVDPLEAK 504
           PTT +WG +  Q     S+ ++R+   AFRVL N NVS GK    G+ KD IMVDP+EAK
Sbjct: 25  PTTAKWGWRREQDA---SMASNRTQSQAFRVLANPNVSSGKD---GSKKDVIMVDPVEAK 78

Query: 503 RLAAKQMQEIQAEDKLKRQRRIEAINGAWAMIGLTAGLVIEGRTGDSIPAQLEGYWRSL- 327
           RLAAKQM+ I+A++KLK++R+IEAINGAWAMIGLTAGLVIEG+TG +I  QL+ Y+ ++ 
Sbjct: 79  RLAAKQMEIIKAKEKLKKRRQIEAINGAWAMIGLTAGLVIEGQTGKNIITQLQDYFGAIV 138

Query: 326 HF 321
           HF
Sbjct: 139 HF 140


>ref|XP_002534461.1| conserved hypothetical protein [Ricinus communis]
           gi|223525247|gb|EEF27921.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 145

 Score =  128 bits (321), Expect = 2e-27
 Identities = 69/102 (67%), Positives = 84/102 (82%), Gaps = 1/102 (0%)
 Frame = -2

Query: 623 TSRSNGTAFRVLVNSNVSPGKGNYRGNVKDAIMVDPLEAKRLAAKQMQEIQAEDKLKRQR 444
           +SR+   AFR+L N NVS GK +++   K+ IMVDPLEAKRLAAKQM+EIQA++K KR+R
Sbjct: 45  SSRTKSQAFRILANPNVS-GKRDFQ---KEVIMVDPLEAKRLAAKQMKEIQAKEKFKRRR 100

Query: 443 RIEAINGAWAMIGLTAGLVIEGRTGDSIPAQLEGYWRSL-HF 321
           +IEAINGAWAMIGLTAGLVIEG+TG SI  QL GYW ++ HF
Sbjct: 101 QIEAINGAWAMIGLTAGLVIEGQTGKSILDQLAGYWSAIVHF 142


>gb|AEO36400.1| hypothetical protein [Amblyomma maculatum]
          Length = 145

 Score =  125 bits (314), Expect = 1e-26
 Identities = 68/118 (57%), Positives = 83/118 (70%)
 Frame = -2

Query: 680 TTLRWGMQSGQYPTVRSLVTSRSNGTAFRVLVNSNVSPGKGNYRGNVKDAIMVDPLEAKR 501
           TT  W +QS Q   + +    R +    +VL ++N   GKG      K+ IMVDPLEAKR
Sbjct: 28  TTFSWRLQSKQ---LANAANRRGDKHLLQVLADANAPSGKGR---EAKEVIMVDPLEAKR 81

Query: 500 LAAKQMQEIQAEDKLKRQRRIEAINGAWAMIGLTAGLVIEGRTGDSIPAQLEGYWRSL 327
           LAAKQMQEIQA DKLKRQR+IEAINGAWAMIGLTAGLV+EG+TG  I  Q+ GY+ ++
Sbjct: 82  LAAKQMQEIQARDKLKRQRQIEAINGAWAMIGLTAGLVVEGQTGHGILEQVAGYFAAI 139


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