BLASTX nr result

ID: Coptis25_contig00022788 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022788
         (376 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containi...   111   5e-23
emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]   111   5e-23
ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|2...   105   3e-21
ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223...   103   1e-20
ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204...   103   1e-20

>ref|XP_002278390.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17033
           [Vitis vinifera] gi|297744557|emb|CBI37819.3| unnamed
           protein product [Vitis vinifera]
          Length = 435

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/125 (46%), Positives = 85/125 (68%)
 Frame = +2

Query: 2   ISESIQRLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSAGSCSLNTSLNRK 181
           +SE++ +L  RERD+  FYC+LI+S SKH  N+ VFD  +RL +++S  S   +  +  +
Sbjct: 120 VSETLIKLGSRERDLVSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSESS---SVYVKER 176

Query: 182 ALQCMINALCTLDLAHNAEKTMEEMRNAGLKPSKFEFRSIVLAYGRLGLFDEMRRILDEM 361
           A + MI++LC + L   AE  +EEMR  GLKPS FEFRS+V  YGR+GL ++M+RIL +M
Sbjct: 177 AYKSMISSLCAVGLPLEAENLIEEMRVKGLKPSVFEFRSVVYGYGRVGLSEDMQRILLQM 236

Query: 362 EISGY 376
              G+
Sbjct: 237 GNEGF 241


>emb|CAN67320.1| hypothetical protein VITISV_039345 [Vitis vinifera]
          Length = 371

 Score =  111 bits (278), Expect = 5e-23
 Identities = 58/125 (46%), Positives = 85/125 (68%)
 Frame = +2

Query: 2   ISESIQRLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSAGSCSLNTSLNRK 181
           +SE++ +L  RERD+  FYC+LI+S SKH  N+ VFD  +RL +++S  S   +  +  +
Sbjct: 56  VSETLIKLGSRERDLVSFYCNLIDSHSKHSSNQGVFDVISRLSRIVSESS---SVYVKER 112

Query: 182 ALQCMINALCTLDLAHNAEKTMEEMRNAGLKPSKFEFRSIVLAYGRLGLFDEMRRILDEM 361
           A + MI++LC + L   AE  +EEMR  GLKPS FEFRS+V  YGR+GL ++M+RIL +M
Sbjct: 113 AYKSMISSLCAVGLPLEAENLIEEMRVKGLKPSVFEFRSVVYGYGRVGLSEDMQRILLQM 172

Query: 362 EISGY 376
              G+
Sbjct: 173 GNEGF 177


>ref|XP_002312938.1| predicted protein [Populus trichocarpa] gi|222849346|gb|EEE86893.1|
           predicted protein [Populus trichocarpa]
          Length = 473

 Score =  105 bits (263), Expect = 3e-21
 Identities = 54/121 (44%), Positives = 77/121 (63%)
 Frame = +2

Query: 2   ISESIQRLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSAGSCSLNTSLNRK 181
           +SE++ RL+F+ER++ LFYC+LI   SKH       D Y+RL Q +S  +   +  + ++
Sbjct: 157 MSETVSRLQFKERELVLFYCNLIGFNSKHNWVRGFDDSYSRLNQFVSDSN---SVYVKKQ 213

Query: 182 ALQCMINALCTLDLAHNAEKTMEEMRNAGLKPSKFEFRSIVLAYGRLGLFDEMRRILDEM 361
             + MI+ LC +  A  AE  + EMR  GLKP  FEFR ++  YGRLGLF +M RILD+M
Sbjct: 214 GYKAMISGLCEMGRAREAEDLIGEMRERGLKPKLFEFRCVLYGYGRLGLFKDMERILDKM 273

Query: 362 E 364
           E
Sbjct: 274 E 274


>ref|XP_004156246.1| PREDICTED: uncharacterized protein LOC101223617 [Cucumis sativus]
          Length = 1296

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/121 (42%), Positives = 78/121 (64%)
 Frame = +2

Query: 2   ISESIQRLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSAGSCSLNTSLNRK 181
           ISE+I +L  +ER +  FY  L+ES SKHG      D Y+RL ++L     S +  + R+
Sbjct: 145 ISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFVDSYSRLLELLYN---SPSVYVKRR 201

Query: 182 ALQCMINALCTLDLAHNAEKTMEEMRNAGLKPSKFEFRSIVLAYGRLGLFDEMRRILDEM 361
           A + M+  LC++   H AE  ++EMR+ G+ P+ +E+RSI+ AYG LGLF+EM+R L +M
Sbjct: 202 AYESMVTGLCSMKRPHEAENLVKEMRSKGITPTAYEYRSIIYAYGTLGLFEEMKRSLKQM 261

Query: 362 E 364
           E
Sbjct: 262 E 262


>ref|XP_004141623.1| PREDICTED: uncharacterized protein LOC101204365 [Cucumis sativus]
          Length = 1913

 Score =  103 bits (257), Expect = 1e-20
 Identities = 52/121 (42%), Positives = 78/121 (64%)
 Frame = +2

Query: 2   ISESIQRLKFRERDVALFYCDLIESLSKHGLNEAVFDHYARLKQVLSAGSCSLNTSLNRK 181
           ISE+I +L  +ER +  FY  L+ES SKHG      D Y+RL ++L     S +  + R+
Sbjct: 145 ISEAISKLGSQERKLVNFYSQLVESQSKHGFERGFVDSYSRLLELLYN---SPSVYVKRR 201

Query: 182 ALQCMINALCTLDLAHNAEKTMEEMRNAGLKPSKFEFRSIVLAYGRLGLFDEMRRILDEM 361
           A + M+  LC++   H AE  ++EMR+ G+ P+ +E+RSI+ AYG LGLF+EM+R L +M
Sbjct: 202 AYESMVTGLCSMKRPHEAENLVKEMRSKGITPTAYEYRSIIYAYGTLGLFEEMKRSLKQM 261

Query: 362 E 364
           E
Sbjct: 262 E 262


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