BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022780
         (1456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    56   6e-11
emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]    67   2e-08
emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]    64   8e-08
emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera]    63   2e-07
emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]    63   2e-07

>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 55.8 bits (133), Expect(2) = 6e-11
 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 2/194 (1%)
 Frame = +3

Query: 57  ILWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCC-LCKEHMETREHLLYHCK 233
           +LW A   P  A I W+ L   +  TDD+L KR  ++ S CC  C++  ET  H+   C 
Sbjct: 74  MLWNAYTPPTGAFITWRFLHNKLP-TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCP 132

Query: 234 YAKDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT*NKIVYN 413
                W++L    +  Q    + IL    N S +++ + ++A +  +  +W   N   ++
Sbjct: 133 VTLQLWDWLLKATD--QHLDFSSIL----NISRMVQHVMNSAIVHIMWSIWLECNNKYFD 186

Query: 414 KGQANLSYTIKRI-TQAVKHAYNLSRSNINNIVSDLATLHSFGLQTRHRRAPQILECYWA 590
             Q  +S     I  + ++ ++ L      + + D      F +  +  R     E  W 
Sbjct: 187 GVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNPCREIIWV 246

Query: 591 LPPENTKD*HGWCL 632
            P       HG C+
Sbjct: 247 PP-------HGGCM 253



 Score = 38.9 bits (89), Expect(2) = 6e-11
 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%)
 Frame = +1

Query: 607 LKINTDGACRGNPGLDGWGSVFHDYMXXXXXXXXXXXXXSTNYITESVAIVESIRRAIDK 786
           +KIN DG+  G+P     G +F                 +T    E  A + +I +A + 
Sbjct: 253 MKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKEL 312

Query: 787 GWTNIRVESDSSAAVKAFQ-SGKVHWSIKAKWN 882
             TNI +E+DS   ++AF  +  V W +  +W+
Sbjct: 313 HLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWH 345


>emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera]
          Length = 577

 Score = 66.6 bits (161), Expect = 2e-08
 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%)
 Frame = +3

Query: 60  LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239
           +WK  V PR +  GW+   G  + T D L +R + +A+RC LC+ H E+ +H+L HC  A
Sbjct: 434 IWKVSVQPRVSFFGWEATWGKTL-TLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKA 492

Query: 240 KDSWNFLTNKFNIGQV---------SGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT 392
           +  W  L + F +  V         SG N   +  K K      +  A+ +     VWKT
Sbjct: 493 RTLWVLLFSMFGVQWVLPAMVKEMLSGWNGTFVGKKRKG-----VWKASPLCLFWTVWKT 547

Query: 393 *NKIVYNKGQANL 431
            NK+ + + + ++
Sbjct: 548 RNKVAFKEEELSI 560


>emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera]
          Length = 1539

 Score = 64.3 bits (155), Expect = 8e-08
 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%)
 Frame = +3

Query: 60  LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239
           +WK  V PR +  GW+   G  + T D L +R + +A+RC LC+ H E+ +H+L HC+  
Sbjct: 276 IWKVTVQPRVSFFGWEATWGKAL-TLDQLQRRGWALANRCYLCQRHEESIDHILLHCE-- 332

Query: 240 KDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT*NKIVYNKG 419
                ++ +       SG N   +  K K     D+  A+ +     VWKT NK+ + + 
Sbjct: 333 ----KWVLSATVKETFSGWNGSFVGKKRK-----DVWKASPLCLFWTVWKTRNKVAFEEE 383

Query: 420 QANL------------SYTIKRITQAVKHAYNLSRSNINN--IVSDLATLHSFGLQTRHR 557
           + ++            S T   ++ +V HAYN S +      I+ D  T  S+  QT   
Sbjct: 384 ELSIQRLKASFVYFLWSKTKSLLSISVYHAYNRSSTFAKRGCILRDFPTKLSY--QTPQV 441

Query: 558 R-------APQILECYWAL 593
           R        PQ++  +W +
Sbjct: 442 RNFFDSSVPPQLIALHWHJ 460


>emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera]
          Length = 2077

 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 4/127 (3%)
 Frame = +3

Query: 51   GVILWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHC 230
            G I+W   V  + +   W+     ++ T D L +R + +A+RCCLC    ET  H+L HC
Sbjct: 1912 GNIIWSPYVPSKVSFFAWEASWEKVL-TQDQLKRRGWILANRCCLCCVEEETINHILVHC 1970

Query: 231  KYAKDSWNFLTNKFNIGQVS--GVNDILM--LCKNKSPLIRDLRSAAAITCLVEVWKT*N 398
               K  W+ L + F +  V    V D L+      K    R +  AA +     +WK  N
Sbjct: 1971 SKTKILWDLLLSLFGVNWVMPFSVRDTLLSWYVSFKDKNHRKVWRAAPLCLFWTIWKERN 2030

Query: 399  KIVYNKG 419
            +IV++ G
Sbjct: 2031 RIVFDNG 2037


>emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera]
          Length = 793

 Score = 62.8 bits (151), Expect = 2e-07
 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%)
 Frame = +3

Query: 60   LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239
            +W   V PR +  GW+   G  + T D L KR + +A+RC LC+ H E+ +H+L HC  A
Sbjct: 656  IWNVYVQPRVSFFGWEATWGKAL-TLDQLQKRGWPLANRCYLCQRHEESIDHILLHCAKA 714

Query: 240  KDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSA---AAITCLV-EVWKT*NKIV 407
            +  W  L + F +  V        L       +   R     A   CL   VWK  NK+V
Sbjct: 715  RTLWALLCSLFGVQWVLPATVKATLLGWDGSFVGKKRKGVWRANPLCLFWMVWKVRNKVV 774

Query: 408  YNKGQANL 431
            + + + ++
Sbjct: 775  FEEEELSI 782