BLASTX nr result
ID: Coptis25_contig00022780
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022780 (1456 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 56 6e-11 emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera] 67 2e-08 emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera] 64 8e-08 emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera] 63 2e-07 emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera] 63 2e-07 >gb|ABD28730.1| Ribonuclease H [Medicago truncatula] Length = 409 Score = 55.8 bits (133), Expect(2) = 6e-11 Identities = 45/194 (23%), Positives = 80/194 (41%), Gaps = 2/194 (1%) Frame = +3 Query: 57 ILWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCC-LCKEHMETREHLLYHCK 233 +LW A P A I W+ L + TDD+L KR ++ S CC C++ ET H+ C Sbjct: 74 MLWNAYTPPTGAFITWRFLHNKLP-TDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCP 132 Query: 234 YAKDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT*NKIVYN 413 W++L + Q + IL N S +++ + ++A + + +W N ++ Sbjct: 133 VTLQLWDWLLKATD--QHLDFSSIL----NISRMVQHVMNSAIVHIMWSIWLECNNKYFD 186 Query: 414 KGQANLSYTIKRI-TQAVKHAYNLSRSNINNIVSDLATLHSFGLQTRHRRAPQILECYWA 590 Q +S I + ++ ++ L + + D F + + R E W Sbjct: 187 GVQKPMSTLFNTILAEVLRLSFMLDIVKGASSMQDFKLARLFSIPFKTNRVNPCREIIWV 246 Query: 591 LPPENTKD*HGWCL 632 P HG C+ Sbjct: 247 PP-------HGGCM 253 Score = 38.9 bits (89), Expect(2) = 6e-11 Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 1/93 (1%) Frame = +1 Query: 607 LKINTDGACRGNPGLDGWGSVFHDYMXXXXXXXXXXXXXSTNYITESVAIVESIRRAIDK 786 +KIN DG+ G+P G +F +T E A + +I +A + Sbjct: 253 MKINCDGSVVGSPSCGSIGVIFRASQTMFCGAFAQNIGYATALEAEYSACMFAIEKAKEL 312 Query: 787 GWTNIRVESDSSAAVKAFQ-SGKVHWSIKAKWN 882 TNI +E+DS ++AF + V W + +W+ Sbjct: 313 HLTNIWIETDSVNVIRAFHFNTGVPWKMHIRWH 345 >emb|CAN68220.1| hypothetical protein VITISV_005372 [Vitis vinifera] Length = 577 Score = 66.6 bits (161), Expect = 2e-08 Identities = 40/133 (30%), Positives = 65/133 (48%), Gaps = 9/133 (6%) Frame = +3 Query: 60 LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239 +WK V PR + GW+ G + T D L +R + +A+RC LC+ H E+ +H+L HC A Sbjct: 434 IWKVSVQPRVSFFGWEATWGKTL-TLDQLQRRGWALANRCYLCQRHEESIDHILLHCDKA 492 Query: 240 KDSWNFLTNKFNIGQV---------SGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT 392 + W L + F + V SG N + K K + A+ + VWKT Sbjct: 493 RTLWVLLFSMFGVQWVLPAMVKEMLSGWNGTFVGKKRKG-----VWKASPLCLFWTVWKT 547 Query: 393 *NKIVYNKGQANL 431 NK+ + + + ++ Sbjct: 548 RNKVAFKEEELSI 560 >emb|CAN64468.1| hypothetical protein VITISV_036942 [Vitis vinifera] Length = 1539 Score = 64.3 bits (155), Expect = 8e-08 Identities = 54/199 (27%), Positives = 90/199 (45%), Gaps = 21/199 (10%) Frame = +3 Query: 60 LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239 +WK V PR + GW+ G + T D L +R + +A+RC LC+ H E+ +H+L HC+ Sbjct: 276 IWKVTVQPRVSFFGWEATWGKAL-TLDQLQRRGWALANRCYLCQRHEESIDHILLHCE-- 332 Query: 240 KDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSAAAITCLVEVWKT*NKIVYNKG 419 ++ + SG N + K K D+ A+ + VWKT NK+ + + Sbjct: 333 ----KWVLSATVKETFSGWNGSFVGKKRK-----DVWKASPLCLFWTVWKTRNKVAFEEE 383 Query: 420 QANL------------SYTIKRITQAVKHAYNLSRSNINN--IVSDLATLHSFGLQTRHR 557 + ++ S T ++ +V HAYN S + I+ D T S+ QT Sbjct: 384 ELSIQRLKASFVYFLWSKTKSLLSISVYHAYNRSSTFAKRGCILRDFPTKLSY--QTPQV 441 Query: 558 R-------APQILECYWAL 593 R PQ++ +W + Sbjct: 442 RNFFDSSVPPQLIALHWHJ 460 >emb|CAN67932.1| hypothetical protein VITISV_013913 [Vitis vinifera] Length = 2077 Score = 63.2 bits (152), Expect = 2e-07 Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 4/127 (3%) Frame = +3 Query: 51 GVILWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHC 230 G I+W V + + W+ ++ T D L +R + +A+RCCLC ET H+L HC Sbjct: 1912 GNIIWSPYVPSKVSFFAWEASWEKVL-TQDQLKRRGWILANRCCLCCVEEETINHILVHC 1970 Query: 231 KYAKDSWNFLTNKFNIGQVS--GVNDILM--LCKNKSPLIRDLRSAAAITCLVEVWKT*N 398 K W+ L + F + V V D L+ K R + AA + +WK N Sbjct: 1971 SKTKILWDLLLSLFGVNWVMPFSVRDTLLSWYVSFKDKNHRKVWRAAPLCLFWTIWKERN 2030 Query: 399 KIVYNKG 419 +IV++ G Sbjct: 2031 RIVFDNG 2037 >emb|CAN67512.1| hypothetical protein VITISV_026954 [Vitis vinifera] Length = 793 Score = 62.8 bits (151), Expect = 2e-07 Identities = 39/128 (30%), Positives = 60/128 (46%), Gaps = 4/128 (3%) Frame = +3 Query: 60 LWKALVHPRTAAIGWKILQGVIMHTDDSLVKRKFHVASRCCLCKEHMETREHLLYHCKYA 239 +W V PR + GW+ G + T D L KR + +A+RC LC+ H E+ +H+L HC A Sbjct: 656 IWNVYVQPRVSFFGWEATWGKAL-TLDQLQKRGWPLANRCYLCQRHEESIDHILLHCAKA 714 Query: 240 KDSWNFLTNKFNIGQVSGVNDILMLCKNKSPLIRDLRSA---AAITCLV-EVWKT*NKIV 407 + W L + F + V L + R A CL VWK NK+V Sbjct: 715 RTLWALLCSLFGVQWVLPATVKATLLGWDGSFVGKKRKGVWRANPLCLFWMVWKVRNKVV 774 Query: 408 YNKGQANL 431 + + + ++ Sbjct: 775 FEEEELSI 782