BLASTX nr result

ID: Coptis25_contig00022773 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022773
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270124.1| PREDICTED: uncharacterized protein LOC100247...    98   1e-18
gb|AFK46700.1| unknown [Lotus japonicus]                               87   2e-15
ref|XP_003517507.1| PREDICTED: uncharacterized protein LOC100816...    86   3e-15
ref|XP_003610988.1| hypothetical protein MTR_5g009260 [Medicago ...    86   6e-15
ref|NP_001235114.1| uncharacterized protein LOC100527882 [Glycin...    79   6e-13

>ref|XP_002270124.1| PREDICTED: uncharacterized protein LOC100247918 [Vitis vinifera]
          Length = 104

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 55/109 (50%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
 Frame = +2

Query: 65  MGNCMEAYTLXXXXXXXXXXXXXXXXPSHSPREDNHGKG-GTRLKIVLRKEDLEWLMYQL 241
           MGNCME                          E+  G G G R+KIVL KE+LEW+M+QL
Sbjct: 1   MGNCMET-----CRERHEAEEEERNQEKQGGEEEKKGSGYGVRVKIVLTKEELEWMMFQL 55

Query: 242 NDKGGKSLEDLLREMEKGRGNVE---EVKIWKPSLESIMESPEVHEMDK 379
            DKGGKSLED+LRE+E+GR +     +V+ WKPSLESIMESPEV EM++
Sbjct: 56  KDKGGKSLEDVLREIERGRSSAATAGKVEGWKPSLESIMESPEVVEMER 104


>gb|AFK46700.1| unknown [Lotus japonicus]
          Length = 112

 Score = 87.4 bits (215), Expect = 2e-15
 Identities = 51/116 (43%), Positives = 66/116 (56%), Gaps = 11/116 (9%)
 Frame = +2

Query: 65  MGNCMEAYTLXXXXXXXXXXXXXXXXPSHSPRE--------DNHGKGGTRLKIVLRKEDL 220
           MGNCME  TL                   +           D+ GK G R+KIVL KE+L
Sbjct: 1   MGNCMETCTLRKQDAMRMQKKQQQKQEEDTKTRSSGFVKINDSKGKNGLRMKIVLTKEEL 60

Query: 221 EWLMYQLNDKGGKSLEDLLREMEKGRGNVEEVKI---WKPSLESIMESPEVHEMDK 379
           +WLM QLN+KGG  LE +L E+E+GR    E+K+   WKPSLESI+E+PE  +MD+
Sbjct: 61  KWLMLQLNEKGGMKLEKVLGEIERGR----EIKVEGSWKPSLESIVEAPESPDMDR 112


>ref|XP_003517507.1| PREDICTED: uncharacterized protein LOC100816904 [Glycine max]
          Length = 98

 Score = 86.3 bits (212), Expect = 3e-15
 Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 4/110 (3%)
 Frame = +2

Query: 65  MGNCMEAYTLXXXXXXXXXXXXXXXXPSHSPREDNHG--KGGTRLKIVLRKEDLEWLMYQ 238
           MGNCME YT+                      E+  G  K G  +K+VL KE+L+WL+ +
Sbjct: 1   MGNCMETYTIGEKQQ------------QEEGEEERGGFVKNGLSMKVVLTKEELKWLILE 48

Query: 239 LNDKGGKSLEDLLREMEKGR--GNVEEVKIWKPSLESIMESPEVHEMDKT 382
           L DKGG  LE +L E+E+GR    VE+   WKPSLESI+E+PE+ EMD T
Sbjct: 49  LKDKGGVRLEQMLEEIERGRREQKVEDEMGWKPSLESILEAPELLEMDTT 98


>ref|XP_003610988.1| hypothetical protein MTR_5g009260 [Medicago truncatula]
           gi|355512323|gb|AES93946.1| hypothetical protein
           MTR_5g009260 [Medicago truncatula]
          Length = 96

 Score = 85.5 bits (210), Expect = 6e-15
 Identities = 46/104 (44%), Positives = 62/104 (59%)
 Frame = +2

Query: 65  MGNCMEAYTLXXXXXXXXXXXXXXXXPSHSPREDNHGKGGTRLKIVLRKEDLEWLMYQLN 244
           MGNCME YT+                 + S   D  GK    +K+VL KE+L+WL++QLN
Sbjct: 1   MGNCMETYTMRPVEMEQQQKEE-----TKSSINDTKGKNSVSMKVVLTKEELKWLIFQLN 55

Query: 245 DKGGKSLEDLLREMEKGRGNVEEVKIWKPSLESIMESPEVHEMD 376
            KGG  +E +L E+EK R  VE    WKPSLESI+E+PE+ E++
Sbjct: 56  KKGGMKVEQVLEEIEKRRQKVEG---WKPSLESILEAPEMLEIN 96


>ref|NP_001235114.1| uncharacterized protein LOC100527882 [Glycine max]
           gi|255633454|gb|ACU17085.1| unknown [Glycine max]
          Length = 104

 Score = 79.0 bits (193), Expect = 6e-13
 Identities = 46/111 (41%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
 Frame = +2

Query: 65  MGNCMEAYTLXXXXXXXXXXXXXXXXPSHSPREDNHGKGGTRLKIVLRKEDLEWLMYQLN 244
           MGNCME YT+                        N  K G  +K+VL KE+L+WL+ +LN
Sbjct: 1   MGNCMETYTIGEKQQQQKEEEERGSL-------SNEEKNGLSMKVVLTKEELKWLILELN 53

Query: 245 DK---GGKSLEDLLREMEKGRGNV--EEVKIWKPSLESIMESPEVHEMDKT 382
            K   GG  LE++L E+E+GR     +  + WKPSLESI+E+PE+ EMD T
Sbjct: 54  KKGEAGGVRLEEMLEEIERGREEKVDQNERGWKPSLESILEAPELLEMDTT 104


Top