BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022764
         (756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|2...   114   3e-23
ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus ...   113   5e-23
ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis ...   107   2e-21
emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]   106   6e-21
emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]   103   5e-20

>ref|XP_002300674.1| predicted protein [Populus trichocarpa] gi|222842400|gb|EEE79947.1|
           predicted protein [Populus trichocarpa]
          Length = 393

 Score =  114 bits (284), Expect = 3e-23
 Identities = 78/241 (32%), Positives = 114/241 (47%), Gaps = 6/241 (2%)
 Frame = -3

Query: 706 TLEELRDRFSTKLVLSSSPREHLDDCVVGAVIYCPQRRLAFARPGDKSWVPVQKNSCTVG 527
           +L ++RD F  K+V+SSSP E   D  V   I C    LA+ + GD+ W  + +NS +  
Sbjct: 155 SLRQMRDGFIKKVVMSSSPLEKKGDFFVAMAILCSTGDLAYCKNGDECW-NIVENSRSFS 213

Query: 526 IEDVIFYNDQFFSVNSRGKVAVYDIDCSPPQAIQLFGAFPDCCSVSQFYXXXXXXXXXXX 347
            EDVI++N  F++VN  G++ V D++ + P+    F   P        Y           
Sbjct: 214 -EDVIYFNGLFYAVNKAGQIVVCDVNGNSPKV--SFIETPRQIGGDMQYLVSSGDGLLLV 270

Query: 346 VKYCSFYDEEP--YYKTNGFEVFKADFDERGWKQINDLGPYSLFLGFNTXXXXXXXXXXS 173
            +Y     E     YKT  FEVFK D +   W+++  LG   LF+G N+           
Sbjct: 271 TRYLDLDVEFDIFIYKTARFEVFKLDLNGPRWERVTSLGDMMLFIGENSSLALSASGLSG 330

Query: 172 FEKNCIYFTDDYRTGYYGTDSEGGHAMGVFNLEDETIKPHYTGVSTSF----YSPPLWII 5
              +CIY+TDDY    Y     G H +G+F L D +I+P       S+    + PPLWI 
Sbjct: 331 CMGDCIYYTDDYSANNY-DGHIGEHDLGIFKLSDGSIEPLPCYPRNSYSRLQWPPPLWIS 389

Query: 4   P 2
           P
Sbjct: 390 P 390


>ref|XP_002510618.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223551319|gb|EEF52805.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 398

 Score =  113 bits (282), Expect = 5e-23
 Identities = 85/251 (33%), Positives = 121/251 (48%), Gaps = 16/251 (6%)
 Frame = -3

Query: 706 TLEELRDRFSTKLVLSSSPREHLDDCVVGAVIYCPQRRLAFARPGDKSWVPVQ--KNSCT 533
           +L ++RD F  K+VLSSSP +  D+  V   I      LA+ R GDKSW  V+  ++ C 
Sbjct: 156 SLRQMRDSFIRKVVLSSSPLK--DNNFVVIAILNQTDDLAYCRNGDKSWSLVENARSFC- 212

Query: 532 VGIEDVIFYNDQFFSVNSRGKVAVYDIDCSPPQAIQLFGAFPDCCSVSQFYXXXXXXXXX 353
              EDVIF N  F++VN  G++ + DI    P+    F   P        Y         
Sbjct: 213 ---EDVIFVNGMFYAVNKAGQIVICDISSDSPRVS--FMETPRQAGGDMQYLVNSGDELL 267

Query: 352 XXVKYCSFY------DEEPY--YKTNGFEVFKADFDERGWKQINDLGPYSLFLGFNTXXX 197
              +Y          D EP+  Y+T  FEVF+ D++   W +++ LG  +LF+G N+   
Sbjct: 268 LVTRYLDLEYEFDHPDMEPHLIYRTIRFEVFRLDWNGPQWLRMSTLGDKALFIGENSSLS 327

Query: 196 XXXXXXXSFEKNCIYFTDDYRTGYYGTDSEGGHAMGVFNLEDETIKP------HYTGVST 35
                      NCIY+TDDY    Y     G H +G+F L DETI+P      ++T  S 
Sbjct: 328 LSATDFSGCMGNCIYYTDDYLDANY-DGHFGDHDLGIFKLCDETIEPLPCYPRNFT--SP 384

Query: 34  SFYSPPLWIIP 2
             +SPPLW+ P
Sbjct: 385 LQWSPPLWVSP 395


>ref|XP_002284795.1| PREDICTED: F-box protein SKIP23-like [Vitis vinifera]
          Length = 389

 Score =  107 bits (268), Expect = 2e-21
 Identities = 81/247 (32%), Positives = 111/247 (44%), Gaps = 9/247 (3%)
 Frame = -3

Query: 715 DGYT--LEELRDRFSTKLVLSSSPREHLDDCVVGAVIYCPQRRLAFARPGDKSWVPVQKN 542
           D YT  L+++RD F  K +LSSSP    D   +  VI      LA  R  D SW  ++  
Sbjct: 148 DVYTRSLKKMRDSFIKKTILSSSPANGSD--FIAVVILNQTGDLALCRKSDDSWTFLEDA 205

Query: 541 SCTVGIEDVIFYNDQFFSVNSRGKVAVYDIDCSPPQAIQLFGAFPDCCSVSQFYXXXXXX 362
                 EDVIF+   F++VN  G +AV D+  S P+   +    P        Y      
Sbjct: 206 QSYA--EDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII--EMPQQFGGDLQYLVESGE 261

Query: 361 XXXXXVKYCSF-YDEEP-----YYKTNGFEVFKADFDERGWKQINDLGPYSLFLGFNTXX 200
                 +Y    YD EP      Y+T  F+V + D     W+ ++ LG  +LFLG N   
Sbjct: 262 ELLLVTRYLDLTYDVEPDQTSLIYRTTRFQVCRLDLKAPRWEVVSSLGDRALFLGENLSL 321

Query: 199 XXXXXXXXSFEKNCIYFTDDYRTGYYGTDSEGGHA-MGVFNLEDETIKPHYTGVSTSFYS 23
                     + NCIY+TDDY    Y  D  GG   +G+FNLED +I+P         + 
Sbjct: 322 SLSSVDFPGCKGNCIYYTDDYSEDNY--DGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWP 379

Query: 22  PPLWIIP 2
           PPLW+ P
Sbjct: 380 PPLWVTP 386


>emb|CAN74180.1| hypothetical protein VITISV_034258 [Vitis vinifera]
          Length = 394

 Score =  106 bits (264), Expect = 6e-21
 Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 27/278 (9%)
 Frame = -3

Query: 754 PSQSTLPDQYPDEDGYTLEELRDRFSTKLVLSSSPREHLDDCVVGAVIYCPQRRLAFARP 575
           P   T  D  PD D   +E     F  K+VLSS+P     +CV+ A I+    +LAF +P
Sbjct: 126 PPAITFEDSPPDLDETPIEF----FLNKVVLSSTPSPSNANCVIMA-IHSNYNKLAFCKP 180

Query: 574 GDKSWVPVQKNSCTVGIEDVIFYNDQFFSVNSRGKVAVYDIDCSPPQAIQLFGAFPDCCS 395
           GDK W+ ++     +  +D+++Y D F+++  R KV   DI   P   +  F   P    
Sbjct: 181 GDKRWITLKSED--IQYKDLLYYKDNFYAI-GRSKVVQCDIGDDP--RVIPFALLPKMGY 235

Query: 394 VSQFYXXXXXXXXXXXVKYCSFYDEEP-------------------------YYKTNGFE 290
               Y           ++Y    D E                           Y+T  F+
Sbjct: 236 FQYRYLVESSGCLLYVLRYMDLKDNEDPLKLRYETTGFKVFDLDSDKRKFSYRYETTTFK 295

Query: 289 VFKADFDERGWKQINDLGPYSLFLGFNTXXXXXXXXXXSFEKNCIYFTDDYRTGYYGTDS 110
           V+  DFD++ WK I ++   +L LG N            F+ N IYF DDY+ GY+  ++
Sbjct: 296 VYNFDFDQKKWKLIKNIKEKALLLGHNQAISISTKKFDGFKSNHIYFLDDYKEGYF-ENT 354

Query: 109 EGGHAMGVFNLEDETIKP--HYTGVSTSFYSPPLWIIP 2
            G H MGVFN++    KP  H T +   + SP  W+ P
Sbjct: 355 YGCHDMGVFNIKTHLFKPIFHRTQL---WASPLFWMRP 389


>emb|CAN69116.1| hypothetical protein VITISV_031843 [Vitis vinifera]
          Length = 389

 Score =  103 bits (256), Expect = 5e-20
 Identities = 80/247 (32%), Positives = 110/247 (44%), Gaps = 9/247 (3%)
 Frame = -3

Query: 715 DGYT--LEELRDRFSTKLVLSSSPREHLDDCVVGAVIYCPQRRLAFARPGDKSWVPVQKN 542
           D YT  L+++RD F  K +LSSSP    D   +  VI      LA  R  D SW  ++  
Sbjct: 148 DVYTRSLKKMRDSFIKKTILSSSPANGSD--FIAVVILNQTGDLALCRKSDDSWTFLEDA 205

Query: 541 SCTVGIEDVIFYNDQFFSVNSRGKVAVYDIDCSPPQAIQLFGAFPDCCSVSQFYXXXXXX 362
                 EDVIF+   F++VN  G +AV D+  S P+   +    P        Y      
Sbjct: 206 QSYS--EDVIFHRGLFYAVNKYGSIAVCDVSGSSPRVSII--EMPQQFGGDLQYLVESGE 261

Query: 361 XXXXXVKYCSF-YDEEP-----YYKTNGFEVFKADFDERGWKQINDLGPYSLFLGFNTXX 200
                 +Y    YD E       Y+T  F+V + D     W+ ++ LG  +LFLG N   
Sbjct: 262 ELLLVTRYLDLTYDVEXDQTSLIYRTTRFQVCRLDSKAPRWEVVSSLGDRALFLGENLSL 321

Query: 199 XXXXXXXXSFEKNCIYFTDDYRTGYYGTDSEGGHA-MGVFNLEDETIKPHYTGVSTSFYS 23
                     + NCIY+TDDY    Y  D  GG   +G+FNLED +I+P         + 
Sbjct: 322 SLSSVDFPGCKGNCIYYTDDYSEDNY--DGIGGEQDLGIFNLEDGSIEPLPCSHFRIRWP 379

Query: 22  PPLWIIP 2
           PPLW+ P
Sbjct: 380 PPLWVTP 386