BLASTX nr result

ID: Coptis25_contig00022758 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022758
         (209 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana] gi|250...    71   8e-11
gb|AAF43236.1|AC012654_20 Contains similarity to the somatic emb...    71   8e-11
ref|NP_177328.1| somatic embryogenesis receptor kinase 1 [Arabid...    71   8e-11
ref|XP_002887392.1| hypothetical protein ARALYDRAFT_895025 [Arab...    71   8e-11
dbj|BAK05837.1| predicted protein [Hordeum vulgare subsp. vulgar...    69   3e-10

>gb|AAK82463.1| At1g71830/F14O23_24 [Arabidopsis thaliana]
           gi|25090706|gb|AAN72307.1| At1g71830/F14O23_24
           [Arabidopsis thaliana]
          Length = 625

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   ALLCTQGSPMGRPRMSEVVRMXXXXXXXXXXXXXXXQKVELDRQESQLPPNQNDENVFDS 180
           ALLCTQGSPM RP+MSEVVRM               QKVE+ R+E  L PN N + + DS
Sbjct: 555 ALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEW--QKVEILREEIDLSPNPNSDWILDS 612

Query: 181 TFNLHAVEL 207
           T+NLHAVEL
Sbjct: 613 TYNLHAVEL 621


>gb|AAF43236.1|AC012654_20 Contains similarity to the somatic embryogenesis receptor-like
           kinase from Daucus carota gb|AC007454; It contains 3
           leucine rich repeat domains PF|00560 and a eukaryotic
           protein kinase domain PF|00069 [Arabidopsis thaliana]
          Length = 601

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   ALLCTQGSPMGRPRMSEVVRMXXXXXXXXXXXXXXXQKVELDRQESQLPPNQNDENVFDS 180
           ALLCTQGSPM RP+MSEVVRM               QKVE+ R+E  L PN N + + DS
Sbjct: 531 ALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEW--QKVEILREEIDLSPNPNSDWILDS 588

Query: 181 TFNLHAVEL 207
           T+NLHAVEL
Sbjct: 589 TYNLHAVEL 597


>ref|NP_177328.1| somatic embryogenesis receptor kinase 1 [Arabidopsis thaliana]
           gi|254814128|sp|Q94AG2.2|SERK1_ARATH RecName:
           Full=Somatic embryogenesis receptor kinase 1;
           Short=AtSERK1; AltName: Full=Somatic embryogenesis
           receptor-like kinase 1; Flags: Precursor
           gi|224589475|gb|ACN59271.1| leucine-rich repeat
           receptor-like protein kinase [Arabidopsis thaliana]
           gi|332197117|gb|AEE35238.1| somatic embryogenesis
           receptor kinase 1 [Arabidopsis thaliana]
          Length = 625

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   ALLCTQGSPMGRPRMSEVVRMXXXXXXXXXXXXXXXQKVELDRQESQLPPNQNDENVFDS 180
           ALLCTQGSPM RP+MSEVVRM               QKVE+ R+E  L PN N + + DS
Sbjct: 555 ALLCTQGSPMERPKMSEVVRMLEGDGLAEKWDEW--QKVEILREEIDLSPNPNSDWILDS 612

Query: 181 TFNLHAVEL 207
           T+NLHAVEL
Sbjct: 613 TYNLHAVEL 621


>ref|XP_002887392.1| hypothetical protein ARALYDRAFT_895025 [Arabidopsis lyrata subsp.
           lyrata] gi|297333233|gb|EFH63651.1| hypothetical protein
           ARALYDRAFT_895025 [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 39/69 (56%), Positives = 45/69 (65%)
 Frame = +1

Query: 1   ALLCTQGSPMGRPRMSEVVRMXXXXXXXXXXXXXXXQKVELDRQESQLPPNQNDENVFDS 180
           ALLCTQGSPM RP+MSEVVRM               QKVE+ R+E  L PN N + + DS
Sbjct: 555 ALLCTQGSPMERPKMSEVVRMLEGDGLAERWDEW--QKVEILREEIDLSPNPNSDWILDS 612

Query: 181 TFNLHAVEL 207
           T+NLHAVEL
Sbjct: 613 TYNLHAVEL 621


>dbj|BAK05837.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|332330747|gb|AEE44134.1| BRI1-associated kinase 1
           [Hordeum vulgare subsp. vulgare]
          Length = 622

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 39/69 (56%), Positives = 46/69 (66%)
 Frame = +1

Query: 1   ALLCTQGSPMGRPRMSEVVRMXXXXXXXXXXXXXXXQKVELDRQESQLPPNQNDENVFDS 180
           ALLCTQGSPM RP+MSEVVRM               QKVE+ RQE +L P++N E + DS
Sbjct: 552 ALLCTQGSPMERPKMSEVVRM--LEGDGLAERWDEWQKVEVSRQEVELGPHRNSEWIVDS 609

Query: 181 TFNLHAVEL 207
           T +LHAVEL
Sbjct: 610 TDSLHAVEL 618


Top