BLASTX nr result

ID: Coptis25_contig00022752 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022752
         (253 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528541.1| conserved hypothetical protein [Ricinus comm...   125   3e-27
ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana] g...   124   6e-27
gb|AAM64960.1| unknown [Arabidopsis thaliana]                         124   6e-27
ref|XP_002881149.1| hypothetical protein ARALYDRAFT_482029 [Arab...   124   8e-27
ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243...   122   3e-26

>ref|XP_002528541.1| conserved hypothetical protein [Ricinus communis]
           gi|223532043|gb|EEF33853.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 361

 Score =  125 bits (315), Expect = 3e-27
 Identities = 58/72 (80%), Positives = 67/72 (93%)
 Frame = -2

Query: 252 GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 73
           GA+G++KGAI QPRLLVPV LVMIYNRWNGI+VP+YGLMHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GAKGLIKGAIGQPRLLVPVVLVMIYNRWNGILVPDYGLMHLELIPMLVGFFTYKIATFVQ 326

Query: 72  AIEEAVSIVKEK 37
           AIEEAV++  EK
Sbjct: 327 AIEEAVTVAVEK 338


>ref|NP_565711.1| ATP synthase protein I [Arabidopsis thaliana]
           gi|3746067|gb|AAC63842.1| expressed protein [Arabidopsis
           thaliana] gi|15215861|gb|AAK91474.1| At2g31040/T16B12.15
           [Arabidopsis thaliana] gi|19699268|gb|AAL91000.1|
           At2g31040/T16B12.15 [Arabidopsis thaliana]
           gi|20197222|gb|AAM14978.1| expressed protein
           [Arabidopsis thaliana] gi|330253388|gb|AEC08482.1| ATP
           synthase protein I [Arabidopsis thaliana]
          Length = 350

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/74 (78%), Positives = 66/74 (89%)
 Frame = -2

Query: 252 GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 73
           GARG+ KGA +QPRLLVPV LVMI+NRWN I+VPEYG MHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQ 326

Query: 72  AIEEAVSIVKEKPE 31
           AIEEA+SI  +KPE
Sbjct: 327 AIEEAISITTQKPE 340


>gb|AAM64960.1| unknown [Arabidopsis thaliana]
          Length = 350

 Score =  124 bits (312), Expect = 6e-27
 Identities = 58/74 (78%), Positives = 66/74 (89%)
 Frame = -2

Query: 252 GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 73
           GARG+ KGA +QPRLLVPV LVMI+NRWN I+VPEYG MHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GARGVAKGAANQPRLLVPVVLVMIFNRWNAILVPEYGFMHLELIPMLVGFFTYKIATFFQ 326

Query: 72  AIEEAVSIVKEKPE 31
           AIEEA+SI  +KPE
Sbjct: 327 AIEEAISITTQKPE 340


>ref|XP_002881149.1| hypothetical protein ARALYDRAFT_482029 [Arabidopsis lyrata subsp.
           lyrata] gi|297326988|gb|EFH57408.1| hypothetical protein
           ARALYDRAFT_482029 [Arabidopsis lyrata subsp. lyrata]
          Length = 350

 Score =  124 bits (311), Expect = 8e-27
 Identities = 57/74 (77%), Positives = 67/74 (90%)
 Frame = -2

Query: 252 GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 73
           GARG++KGA +QPRLLVPV LVMI+NRWN I+VP+YG MHL+LIPML+GFFTYKIATF Q
Sbjct: 267 GARGVVKGAANQPRLLVPVVLVMIFNRWNAILVPDYGFMHLELIPMLVGFFTYKIATFFQ 326

Query: 72  AIEEAVSIVKEKPE 31
           AIEEA+SI  +KPE
Sbjct: 327 AIEEAISITTQKPE 340


>ref|XP_002280622.1| PREDICTED: uncharacterized protein LOC100243760 [Vitis vinifera]
           gi|302143424|emb|CBI21985.3| unnamed protein product
           [Vitis vinifera]
          Length = 338

 Score =  122 bits (306), Expect = 3e-26
 Identities = 57/75 (76%), Positives = 69/75 (92%)
 Frame = -2

Query: 252 GARGILKGAISQPRLLVPVALVMIYNRWNGIVVPEYGLMHLDLIPMLLGFFTYKIATFTQ 73
           GA+G++KGAI+QPRLLVPVALVMIYNRWN IVVPE+G MHL+LIPML+GFFTYK+ATF Q
Sbjct: 263 GAKGLMKGAIAQPRLLVPVALVMIYNRWNEIVVPEFGFMHLELIPMLVGFFTYKVATFVQ 322

Query: 72  AIEEAVSIVKEKPEV 28
           AIEEA++IV +  +V
Sbjct: 323 AIEEALTIVGKDTQV 337


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