BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022722
         (619 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]               91   1e-16
emb|CCH50966.1| T4.5 [Malus x robusta]                                 82   2e-14
emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]    52   8e-13
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    78   1e-12
emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]    50   2e-12

>gb|AFP55537.1| retrotransposon polyprotein [Rosa rugosa]
          Length = 1384

 Score = 91.3 bits (225), Expect = 1e-16
 Identities = 39/88 (44%), Positives = 63/88 (71%), Gaps = 1/88 (1%)
 Frame = +2

Query: 296 KDIASGRMLFQGQTENGLYPLHL-TNTSNVTSPTAFISAKASVSTWHTRLGHPSTDVLHK 472
           KD+ +G+ML+ G++ENGLYP    + TS V+S  A++S++ S  TWH+RLGH S+ ++ K
Sbjct: 442 KDLKTGKMLYHGKSENGLYPFRFPSKTSKVSSSLAYVSSRVSAETWHSRLGHASSTIVSK 501

Query: 473 LVSSKYIDVQGSTKIVFCSNCVIGKSSK 556
           ++S+K + V GS+   FC +C +GKS +
Sbjct: 502 VLSNKAVPVLGSSNFSFCQSCPLGKSGE 529


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score = 82.4 bits (202), Expect(2) = 2e-14
 Identities = 41/93 (44%), Positives = 59/93 (63%), Gaps = 5/93 (5%)
 Frame = +2

Query: 296 KDIASGRMLFQGQTENGLYPLHLTNTSNVT----SPTAFISAKASVSTWHTRLGHPSTDV 463
           KD+++G+MLFQG +E GLYP +   ++ V+    SPTA + AKA + TWH RLGHPS   
Sbjct: 684 KDLSTGKMLFQGPSEGGLYPFYWNASNGVSGIAISPTALMIAKADIHTWHRRLGHPSGGT 743

Query: 464 LHKLVSSKYIDVQG-STKIVFCSNCVIGKSSKL 559
           LH +V   ++ V G    +  C+ C +GKS +L
Sbjct: 744 LHSVVHKNHLPVIGYVNNMSVCTACQLGKSYRL 776



 Score = 21.6 bits (44), Expect(2) = 2e-14
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +3

Query: 561 FGTSTCKTFASLQLLHIDL 617
           F T  C +   LQLLH D+
Sbjct: 778 FSTLPCTSSRPLQLLHTDV 796


>emb|CAN62182.1| hypothetical protein VITISV_044400 [Vitis vinifera]
          Length = 920

 Score = 51.6 bits (122), Expect(2) = 8e-13
 Identities = 32/99 (32%), Positives = 54/99 (54%), Gaps = 9/99 (9%)
 Frame = +2

Query: 290 MAKDIASGRMLFQGQTENGLYPLHLTNT----SNVTSPTAFISAKASV-----STWHTRL 442
           + KD  +  +L QG+ ENGLY   + +     S+V + +AF S  +S        WH RL
Sbjct: 251 LKKDRHTKMVLAQGKLENGLYKFPVFSNKKPYSSVNNASAFHSHFSSTIENKAELWHNRL 310

Query: 443 GHPSTDVLHKLVSSKYIDVQGSTKIVFCSNCVIGKSSKL 559
           GH ++D++ K++++  +   G  K   CS+C + KS +L
Sbjct: 311 GHVASDIVSKVMNTCNV-ASGKYKSTVCSDCQLAKSHRL 348



 Score = 47.4 bits (111), Expect(2) = 8e-13
 Identities = 19/34 (55%), Positives = 26/34 (76%)
 Frame = +1

Query: 190 WYADTGATNHLTSDLSNLSLHSDYKGTDKVMVGN 291
           WY D+GA++HLT +L NL+  S Y GTD+V +GN
Sbjct: 195 WYLDSGASHHLTQNLGNLTSTSPYTGTDRVTIGN 228


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 77.8 bits (190), Expect = 1e-12
 Identities = 40/93 (43%), Positives = 59/93 (63%), Gaps = 3/93 (3%)
 Frame = +2

Query: 290 MAKDIASGRMLFQGQTENGLYPLHLTNT--SNVTSPTAFISAKASVSTWHTRLGHPSTDV 463
           + K+  +GR+L QG  ENGLYPL    T   ++T  +  I  +A+  TWH+RLGHPS+ +
Sbjct: 412 VVKENLTGRILLQGVVENGLYPLAGCKTFHKSLTCLSTTIGVRANADTWHSRLGHPSSVI 471

Query: 464 LHKLVSSKYIDVQG-STKIVFCSNCVIGKSSKL 559
            + L  S  + V+G STK+ FCS C +GK+ +L
Sbjct: 472 FNSLFHSNKLSVKGSSTKLEFCSACQLGKAKQL 504


>emb|CAN62447.1| hypothetical protein VITISV_024007 [Vitis vinifera]
          Length = 1144

 Score = 49.7 bits (117), Expect(2) = 2e-12
 Identities = 18/37 (48%), Positives = 30/37 (81%)
 Frame = +1

Query: 190 WYADTGATNHLTSDLSNLSLHSDYKGTDKVMVGNGQG 300
           W  D+ A++++T D+ NLS+HS+Y GTD+V++G+G G
Sbjct: 332 WLIDSAASHNITGDIKNLSIHSEYDGTDEVLLGDGTG 368



 Score = 47.8 bits (112), Expect(2) = 2e-12
 Identities = 25/83 (30%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
 Frame = +2

Query: 305 ASGRMLFQGQTENGLYPLHLTNTSNVTSP-TAFISAKASVSTWHTRLGHPSTDVLHKLVS 481
           ++G +L +G  ENG+Y    +  +  T    A++  + S++ WH RLGHPS  V+  LV+
Sbjct: 373 STGAILLRGACENGVYIFPNSMMAPSTPKMVAYVHERTSINGWHKRLGHPSIKVVQNLVN 432

Query: 482 SKYIDVQGSTKIVFCSNCVIGKS 550
              + +  +   + C +C I K+
Sbjct: 433 LFSLPLTTNKLPLSCPSCSINKA 455