BLASTX nr result

ID: Coptis25_contig00022719 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022719
         (900 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-li...   265   1e-68
ref|XP_002301268.1| predicted protein [Populus trichocarpa] gi|2...   257   3e-66
ref|XP_004152405.1| PREDICTED: vesicle-associated protein 1-2-li...   254   2e-65
ref|XP_002511657.1| vesicle-associated membrane protein, putativ...   253   3e-65
ref|XP_003517022.1| PREDICTED: vesicle-associated protein 1-2-li...   251   1e-64

>ref|XP_002274894.2| PREDICTED: vesicle-associated protein 1-2-like [Vitis vinifera]
           gi|296089208|emb|CBI38911.3| unnamed protein product
           [Vitis vinifera]
          Length = 239

 Score =  265 bits (676), Expect = 1e-68
 Identities = 131/193 (67%), Positives = 153/193 (79%)
 Frame = +3

Query: 3   ELLSIEPQELKFPFELKKQISCSLQVLNKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRST 182
           ELLSIEPQEL+FPFEL+KQISCSLQ+ NKTD++VAFKVKTTNPKKYCVRPNTGVV+PRST
Sbjct: 5   ELLSIEPQELQFPFELRKQISCSLQLSNKTDNFVAFKVKTTNPKKYCVRPNTGVVMPRST 64

Query: 183 CDVVVTMQAQREAPPDLQCKDKFLLQSVTATPGATAKDINPEMFNKESGNLIEECKLRVV 362
           CDV+VTMQAQRE P D+QCKDKFLLQS  A+PGATAKDI  +MFNKE+GN +EECKLRV 
Sbjct: 65  CDVIVTMQAQRETPQDMQCKDKFLLQSAIASPGATAKDITSDMFNKEAGNRVEECKLRVA 124

Query: 363 YXXXXXXXXXXXXXXXXXXXXXXXLSENGNMNSADYTAVSRGSNEPQEKSSEGSALISKL 542
           Y                       +S+NGN+N++++TAVSR   EPQ+ SSE  ALISKL
Sbjct: 125 YVPPPQPPSPVREGSEEGSSPRASVSDNGNINASEFTAVSRAYVEPQDNSSEARALISKL 184

Query: 543 TEEKNTAIEQANK 581
           TEEK +AI+Q NK
Sbjct: 185 TEEKKSAIQQNNK 197


>ref|XP_002301268.1| predicted protein [Populus trichocarpa] gi|222842994|gb|EEE80541.1|
           predicted protein [Populus trichocarpa]
          Length = 241

 Score =  257 bits (656), Expect = 3e-66
 Identities = 131/217 (60%), Positives = 157/217 (72%), Gaps = 3/217 (1%)
 Frame = +3

Query: 3   ELLSIEPQELKFPFELKKQISCSLQVLNKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRST 182
           ELLSIEPQEL+FPFEL+KQISCSL++LNK+D YVAFK+KTTNPKKYCVRPNTGVVLPRST
Sbjct: 5   ELLSIEPQELQFPFELRKQISCSLRLLNKSDYYVAFKIKTTNPKKYCVRPNTGVVLPRST 64

Query: 183 CDVVVTMQAQREAPPDLQCKDKFLLQSVTATPGATAKDINPEMFNKESGNLIEECKLRVV 362
           CDV+VTMQAQ+E PPD+QCKDKFLLQSV  +PGAT KDI PEMFNKE+G+ +EECKLRV 
Sbjct: 65  CDVIVTMQAQKEMPPDMQCKDKFLLQSVITSPGATPKDITPEMFNKEAGHEVEECKLRVA 124

Query: 363 YXXXXXXXXXXXXXXXXXXXXXXXLSENGNMNSADYTAVSRG---SNEPQEKSSEGSALI 533
           Y                       +S+NGN++S++ TAVSR      EP+E SSE  ALI
Sbjct: 125 YVAPPRPPSPVHEGSEEGSSPRVSVSDNGNLSSSEQTAVSRSYVQGPEPEENSSEERALI 184

Query: 534 SKLTEEKNTAIEQANKXXXXXXXXXXXXXXXXGGVQF 644
           SKLTEE+N+AI++  +                GG+ F
Sbjct: 185 SKLTEERNSAIQEKKQLQQELELLRHHPSKSRGGIPF 221


>ref|XP_004152405.1| PREDICTED: vesicle-associated protein 1-2-like [Cucumis sativus]
           gi|449513273|ref|XP_004164281.1| PREDICTED:
           vesicle-associated protein 1-2-like [Cucumis sativus]
          Length = 241

 Score =  254 bits (649), Expect = 2e-65
 Identities = 130/196 (66%), Positives = 148/196 (75%), Gaps = 3/196 (1%)
 Frame = +3

Query: 3   ELLSIEPQELKFPFELKKQISCSLQVLNKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRST 182
           ELLSIEP ELKFPFELKKQISCSLQ+ NKTD YVAFKVKTTNPKKYCVRPNTG+V PRST
Sbjct: 5   ELLSIEPLELKFPFELKKQISCSLQLSNKTDSYVAFKVKTTNPKKYCVRPNTGIVSPRST 64

Query: 183 CDVVVTMQAQREAPPDLQCKDKFLLQSVTATPGATAKDINPEMFNKESGNLIEECKLRVV 362
           CDV+VTMQAQ+EAP D+QCKDKFLLQSV    GATAKDIN EMFNKE+G+++EE KL+VV
Sbjct: 65  CDVIVTMQAQKEAPSDMQCKDKFLLQSVKTVDGATAKDINAEMFNKEAGHVVEEFKLKVV 124

Query: 363 YXXXXXXXXXXXXXXXXXXXXXXXLSENGNMNSADYTAVSRG---SNEPQEKSSEGSALI 533
           Y                       +SENGN N AD    +RG    +EPQ+KS+E  ALI
Sbjct: 125 YVSPPQPPSPVPEGSEEGSSPRGSVSENGNFNDADLNTATRGYVERSEPQDKSAEARALI 184

Query: 534 SKLTEEKNTAIEQANK 581
           +KLTEEKN A++Q NK
Sbjct: 185 AKLTEEKNNAMQQYNK 200


>ref|XP_002511657.1| vesicle-associated membrane protein, putative [Ricinus communis]
           gi|223548837|gb|EEF50326.1| vesicle-associated membrane
           protein, putative [Ricinus communis]
          Length = 241

 Score =  253 bits (647), Expect = 3e-65
 Identities = 129/196 (65%), Positives = 154/196 (78%), Gaps = 3/196 (1%)
 Frame = +3

Query: 3   ELLSIEPQELKFPFELKKQISCSLQVLNKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRST 182
           ELL+IEPQEL+FP EL+KQISCSLQ+LNK+D+YVAFKVKTTNPKKYCVRPNTGVVLPRST
Sbjct: 5   ELLTIEPQELQFPLELRKQISCSLQLLNKSDNYVAFKVKTTNPKKYCVRPNTGVVLPRST 64

Query: 183 CDVVVTMQAQREAPPDLQCKDKFLLQSVTATPGATAKDINPEMFNKESGNLIEECKLRVV 362
           CDV+VTMQAQ+EAP D+QCKDKFLLQSV A+PGATAKDIN EMFNKE+G+ +EECKLRVV
Sbjct: 65  CDVIVTMQAQKEAPLDMQCKDKFLLQSVIASPGATAKDINAEMFNKEAGHQVEECKLRVV 124

Query: 363 YXXXXXXXXXXXXXXXXXXXXXXXLSENGNMNSADYTAVSR---GSNEPQEKSSEGSALI 533
           Y                       +S+NGN+++++ T V +     +EPQ+ S E  ALI
Sbjct: 125 YVAPPGPPSPVREGSEEGSSPRASVSDNGNLSASERTVVLKTFAERHEPQDNSIEARALI 184

Query: 534 SKLTEEKNTAIEQANK 581
           SKLTEEKN+AI+Q  K
Sbjct: 185 SKLTEEKNSAIQQNKK 200


>ref|XP_003517022.1| PREDICTED: vesicle-associated protein 1-2-like [Glycine max]
          Length = 241

 Score =  251 bits (642), Expect = 1e-64
 Identities = 129/217 (59%), Positives = 154/217 (70%), Gaps = 3/217 (1%)
 Frame = +3

Query: 3   ELLSIEPQELKFPFELKKQISCSLQVLNKTDDYVAFKVKTTNPKKYCVRPNTGVVLPRST 182
           ELL I+PQEL+FPFEL+KQISCSLQ+ NKTD+YVAFKVKTTNPKKYCVRPNTGVV+PRST
Sbjct: 5   ELLHIQPQELQFPFELRKQISCSLQLSNKTDNYVAFKVKTTNPKKYCVRPNTGVVMPRST 64

Query: 183 CDVVVTMQAQREAPPDLQCKDKFLLQSVTATPGATAKDINPEMFNKESGNLIEECKLRVV 362
           CDV+VTMQAQ+EAPPD+QCKDKFLLQSV A+PGAT KDI PEMFNKESG+ +EECKLRVV
Sbjct: 65  CDVIVTMQAQKEAPPDMQCKDKFLLQSVVASPGATTKDITPEMFNKESGHDVEECKLRVV 124

Query: 363 YXXXXXXXXXXXXXXXXXXXXXXXLSENGNMNSADYTAVSRGSN---EPQEKSSEGSALI 533
           Y                       +SENG+ ++A++T  S+  N   E Q+ S E  A I
Sbjct: 125 YVAPPQPPSPVREGSDEDSSPRASVSENGHSSAAEFTGASKAFNERAEHQDASFEARAHI 184

Query: 534 SKLTEEKNTAIEQANKXXXXXXXXXXXXXXXXGGVQF 644
           SK+TEE+N+ +EQ  +                GGV F
Sbjct: 185 SKVTEERNSVVEQNRRLQQELELLRRDASRSHGGVPF 221


Top