BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022709
         (1392 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic ...   658   0.0  
ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|2...   652   0.0  
ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, p...   643   0.0  
ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [...   638   e-180
ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic ...   637   e-180

>ref|XP_002269920.2| PREDICTED: DNA polymerase epsilon catalytic subunit A [Vitis
            vinifera]
          Length = 2214

 Score =  658 bits (1698), Expect = 0.0
 Identities = 314/389 (80%), Positives = 348/389 (89%)
 Frame = +1

Query: 226  RDQKRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYS 405
            R  + D    KKQKL R AEEE E+K G D+FS+G+KRLGWLLTF+SSSWED++T +VYS
Sbjct: 7    RRDRADVWKHKKQKLIRNAEEEVESKLGLDLFSEGEKRLGWLLTFASSSWEDEETHKVYS 66

Query: 406  CVDLYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLN 585
            CVDLYFV+QDGS+FK KY+F+PYFYAATKD  EM VE YL+RRYEGQIADIE+  KEDL+
Sbjct: 67   CVDLYFVSQDGSSFKSKYKFRPYFYAATKDKMEMDVEAYLRRRYEGQIADIEIMYKEDLD 126

Query: 586  LKNHLSGLQKSYLKISFDTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQ 765
            LKNHLSGL KSYLKISFD VQQLM V++DLL VV+RN+ K D AEAYESILTGKS QR Q
Sbjct: 127  LKNHLSGLCKSYLKISFDNVQQLMHVKSDLLHVVERNRAKFDAAEAYESILTGKSKQRTQ 186

Query: 766  DFIECIVDLREYDVPFHVRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAF 945
            DFI+ IVDLREYDVP+HVRFAID D+RCGQWYDV+VSS GV+LE+RTDLLQRAEVHVCAF
Sbjct: 187  DFIDYIVDLREYDVPYHVRFAIDKDVRCGQWYDVNVSSAGVMLERRTDLLQRAEVHVCAF 246

Query: 946  DIETTKLPLKFPDAEIDSIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEGYFKV 1125
            DIETTKLPLKFPDAE D +MMISYMVDGQGYLIINRECV EDIE+LEYTPKPEFEG FKV
Sbjct: 247  DIETTKLPLKFPDAEYDLVMMISYMVDGQGYLIINRECVGEDIEELEYTPKPEFEGCFKV 306

Query: 1126 KNVKNEEELLRHWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGMVMNDEVGFHCDQN 1305
             NVKNE+ELLR WFAHMREVKPGIYVTYNGDFFDWPFLE+RAAHHG+ M+DEVGF CD+N
Sbjct: 307  TNVKNEKELLRMWFAHMREVKPGIYVTYNGDFFDWPFLESRAAHHGLKMSDEVGFQCDKN 366

Query: 1306 QNECRAKFACHLDCFAWVKRDSYLPQGSQ 1392
            Q ECRAKF+CHLDCFAWVKRDSYLPQGSQ
Sbjct: 367  QGECRAKFSCHLDCFAWVKRDSYLPQGSQ 395


>ref|XP_002328167.1| predicted protein [Populus trichocarpa] gi|222837682|gb|EEE76047.1|
            predicted protein [Populus trichocarpa]
          Length = 2221

 Score =  652 bits (1682), Expect = 0.0
 Identities = 315/393 (80%), Positives = 347/393 (88%)
 Frame = +1

Query: 214  NKNWRDQKRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTR 393
            ++ W D+K   R+ KKQKL RTAEEE E+K GFD+F++GDKRLGWLLTFSSSS +D++T 
Sbjct: 5    SRRW-DRKDLRRSSKKQKLMRTAEEELESKLGFDLFTEGDKRLGWLLTFSSSSLDDEETG 63

Query: 394  RVYSCVDLYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRK 573
            RVYSCVDLYFV+QDGS FK KY+F+PYFYAATK+  EM VE YL+RRYE QIA IE+  K
Sbjct: 64   RVYSCVDLYFVSQDGSAFKSKYKFRPYFYAATKEKMEMDVEGYLRRRYESQIAYIEIVEK 123

Query: 574  EDLNLKNHLSGLQKSYLKISFDTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSN 753
            EDL+LKNHLSGL KSYLKISF TVQQLM V+ DLL VV+RNQ K D AEAYESILTGK  
Sbjct: 124  EDLDLKNHLSGLHKSYLKISFATVQQLMDVKRDLLHVVERNQAKSDAAEAYESILTGKRE 183

Query: 754  QRHQDFIECIVDLREYDVPFHVRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVH 933
            QR QDF++CI+DLREYDVP+HVRFAIDND+RCGQWYDVSVSSTGV LEKRTDLLQRAEVH
Sbjct: 184  QRPQDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSTGVKLEKRTDLLQRAEVH 243

Query: 934  VCAFDIETTKLPLKFPDAEIDSIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEG 1113
            VCAFDIETTKLPLKFPDA+ D IMMISYMVDGQGYLI NRECV EDIEDLEYTPKPE+EG
Sbjct: 244  VCAFDIETTKLPLKFPDADYDLIMMISYMVDGQGYLITNRECVGEDIEDLEYTPKPEYEG 303

Query: 1114 YFKVKNVKNEEELLRHWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGMVMNDEVGFH 1293
             FKV NVKNE ELL+ WFAHMREVKPGIYVTYNGD+FDWPFLE+RAA+HG  M DEVGF 
Sbjct: 304  CFKVTNVKNEVELLKQWFAHMREVKPGIYVTYNGDYFDWPFLESRAAYHGFKMGDEVGFS 363

Query: 1294 CDQNQNECRAKFACHLDCFAWVKRDSYLPQGSQ 1392
            CD+NQ ECRAKFACHLDCFAWVKRDSYLPQGSQ
Sbjct: 364  CDKNQGECRAKFACHLDCFAWVKRDSYLPQGSQ 396


>ref|XP_002529065.1| DNA polymerase epsilon, catalytic subunit, putative [Ricinus
            communis] gi|223531477|gb|EEF33309.1| DNA polymerase
            epsilon, catalytic subunit, putative [Ricinus communis]
          Length = 2227

 Score =  643 bits (1658), Expect = 0.0
 Identities = 301/388 (77%), Positives = 347/388 (89%)
 Frame = +1

Query: 226  RDQKRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYS 405
            RD+    R+ KKQKL R AEEE ++K GFD+F++GDKRLGWLLTF+SSSWED++TRRV+S
Sbjct: 9    RDRNNYNRSSKKQKLIRNAEEELDSKLGFDLFTEGDKRLGWLLTFASSSWEDEETRRVHS 68

Query: 406  CVDLYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLN 585
            CVDLYFV+QDGS FK K++F+PYFYAATK+  EM VE YL+RRYE QIADIE+  KEDL+
Sbjct: 69   CVDLYFVSQDGSAFKSKFKFRPYFYAATKEKMEMDVEAYLRRRYESQIADIEIVEKEDLD 128

Query: 586  LKNHLSGLQKSYLKISFDTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQ 765
            LKNHLSGL+K YLKISF TVQQLM V+ DL  VV+RN+ K DTA+AYES+LTG+  QR Q
Sbjct: 129  LKNHLSGLRKRYLKISFSTVQQLMDVKKDLSHVVERNRAKFDTADAYESLLTGRREQRPQ 188

Query: 766  DFIECIVDLREYDVPFHVRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAF 945
            DF++CIVDLREYDVP+HVRFAIDND+RCGQWYDVSVSS+GV+LE+RTDLLQRAEV +CAF
Sbjct: 189  DFLDCIVDLREYDVPYHVRFAIDNDIRCGQWYDVSVSSSGVMLERRTDLLQRAEVRICAF 248

Query: 946  DIETTKLPLKFPDAEIDSIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEGYFKV 1125
            DIETTKLPLKFPDA+ D IMMISYM+DGQG+LIINRECV EDIEDLEYTPKPEFEG FKV
Sbjct: 249  DIETTKLPLKFPDADYDLIMMISYMIDGQGFLIINRECVGEDIEDLEYTPKPEFEGCFKV 308

Query: 1126 KNVKNEEELLRHWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGMVMNDEVGFHCDQN 1305
             NVKNE ELL+ WFAHM+EVKPGIYVTYNGD+FDWPFLE+RAA+HG+ M+DEVGF CD+N
Sbjct: 309  TNVKNEVELLKQWFAHMQEVKPGIYVTYNGDYFDWPFLESRAAYHGIKMSDEVGFSCDKN 368

Query: 1306 QNECRAKFACHLDCFAWVKRDSYLPQGS 1389
            Q ECRA+ ACHLDCFAWVKRDSYLPQGS
Sbjct: 369  QGECRARSACHLDCFAWVKRDSYLPQGS 396


>ref|XP_003606227.1| DNA polymerase epsilon catalytic subunit A [Medicago truncatula]
            gi|355507282|gb|AES88424.1| DNA polymerase epsilon
            catalytic subunit A [Medicago truncatula]
          Length = 2248

 Score =  638 bits (1645), Expect = e-180
 Identities = 300/394 (76%), Positives = 346/394 (87%)
 Frame = +1

Query: 211  MNKNWRDQKRDYRNPKKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDT 390
            MN+ W   +RD +  KKQKL  +AEEE EAK GFD+FS+G+KRLGWLLTFSSSS+ED+DT
Sbjct: 1    MNRKW--DRRDNKVSKKQKLLNSAEEELEAKLGFDLFSEGEKRLGWLLTFSSSSYEDEDT 58

Query: 391  RRVYSCVDLYFVTQDGSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTR 570
             +VYSC+DLYFV QDGS+FK KYRF+PYFY ATK+  EM V+ YL+RRYE QIADI++  
Sbjct: 59   GKVYSCIDLYFVKQDGSSFKTKYRFRPYFYVATKNKMEMDVDAYLRRRYESQIADIKIVE 118

Query: 571  KEDLNLKNHLSGLQKSYLKISFDTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKS 750
            KEDL+LKNHLSGL+KSYL++SFDTVQQLM V++DL+ VV+RN+ K D AEAYESILTG+ 
Sbjct: 119  KEDLDLKNHLSGLRKSYLRLSFDTVQQLMNVKSDLMQVVERNKAKSDAAEAYESILTGRR 178

Query: 751  NQRHQDFIECIVDLREYDVPFHVRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEV 930
             Q+ QDF++CI+DLREYDVP+HVRFAIDND+RCGQWYDV VS+ GV LE+RTDLLQRAEV
Sbjct: 179  EQKLQDFLDCIIDLREYDVPYHVRFAIDNDIRCGQWYDVGVSNDGVTLERRTDLLQRAEV 238

Query: 931  HVCAFDIETTKLPLKFPDAEIDSIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFE 1110
             VCAFDIETTKLPLKFPDA+ DS+MMISYMVD QGYLI NRECV +DIEDLE+TPKPEFE
Sbjct: 239  RVCAFDIETTKLPLKFPDADYDSVMMISYMVDRQGYLITNRECVGDDIEDLEFTPKPEFE 298

Query: 1111 GYFKVKNVKNEEELLRHWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGMVMNDEVGF 1290
            G+FKV NV+NE ELLR WF+HM+EVKPGIYVTYNGDFFDWPFLE RAAHHG  M+DE+GF
Sbjct: 299  GFFKVTNVQNEIELLRLWFSHMQEVKPGIYVTYNGDFFDWPFLERRAAHHGFKMSDELGF 358

Query: 1291 HCDQNQNECRAKFACHLDCFAWVKRDSYLPQGSQ 1392
             CD NQ ECRAKFA HLDCFAWVKRDSYLPQGSQ
Sbjct: 359  QCDMNQGECRAKFAPHLDCFAWVKRDSYLPQGSQ 392


>ref|XP_004160105.1| PREDICTED: DNA polymerase epsilon catalytic subunit A-like, partial
            [Cucumis sativus]
          Length = 2051

 Score =  637 bits (1644), Expect = e-180
 Identities = 299/378 (79%), Positives = 341/378 (90%)
 Frame = +1

Query: 256  KKQKLFRTAEEEREAKFGFDIFSQGDKRLGWLLTFSSSSWEDQDTRRVYSCVDLYFVTQD 435
            KKQ++ R+AEEE E+K GFD+FS+GDKRLGWLLTF+ SS EDQDT +VYSC+DLYFVTQD
Sbjct: 18   KKQRVIRSAEEEIESKLGFDLFSEGDKRLGWLLTFAPSSLEDQDTGKVYSCIDLYFVTQD 77

Query: 436  GSNFKCKYRFKPYFYAATKDGTEMGVETYLKRRYEGQIADIELTRKEDLNLKNHLSGLQK 615
            GS+FK KY+F+PYFYAATKD  E  VE YL+RRYEG+IADIE+ +KEDL+LKNHLSGL+K
Sbjct: 78   GSSFKSKYKFRPYFYAATKDKMETDVEAYLRRRYEGRIADIEILQKEDLDLKNHLSGLRK 137

Query: 616  SYLKISFDTVQQLMLVRNDLLPVVQRNQEKIDTAEAYESILTGKSNQRHQDFIECIVDLR 795
            +YLK+SFDTVQ+LM V+++L+ VV+ N  K D AEAY+SIL GK  Q+ QDF+ECI+DLR
Sbjct: 138  TYLKLSFDTVQELMNVKSELVHVVENNWAKSDAAEAYDSILFGKREQKPQDFLECIIDLR 197

Query: 796  EYDVPFHVRFAIDNDLRCGQWYDVSVSSTGVILEKRTDLLQRAEVHVCAFDIETTKLPLK 975
            EYDVP+HVRFAID+DLRCGQWYDVSVSSTGV LEKR DLLQRAEVH+CAFDIETTKLPLK
Sbjct: 198  EYDVPYHVRFAIDHDLRCGQWYDVSVSSTGVTLEKRKDLLQRAEVHICAFDIETTKLPLK 257

Query: 976  FPDAEIDSIMMISYMVDGQGYLIINRECVWEDIEDLEYTPKPEFEGYFKVKNVKNEEELL 1155
            FPDAE D IMMISYMVDG GYLIINRECV EDIE+LEYTPKPEFEG+FKV NVKNE ELL
Sbjct: 258  FPDAEYDMIMMISYMVDGNGYLIINRECVGEDIENLEYTPKPEFEGFFKVTNVKNELELL 317

Query: 1156 RHWFAHMREVKPGIYVTYNGDFFDWPFLETRAAHHGMVMNDEVGFHCDQNQNECRAKFAC 1335
            + WF+HMREVKPGIYVTYNGDFFDWPF+ETRAA+HG  M+DEVGF CD+NQ ECR+KFAC
Sbjct: 318  KLWFSHMREVKPGIYVTYNGDFFDWPFIETRAAYHGFKMSDEVGFQCDKNQGECRSKFAC 377

Query: 1336 HLDCFAWVKRDSYLPQGS 1389
            HLDCFAWVKRDSYLPQGS
Sbjct: 378  HLDCFAWVKRDSYLPQGS 395