BLASTX nr result

ID: Coptis25_contig00022708 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022708
         (1231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32637.3| unnamed protein product [Vitis vinifera]              417   e-114
ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein ...   417   e-114
ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|2...   410   e-112
ref|XP_003536974.1| PREDICTED: uncharacterized membrane protein ...   402   e-110
ref|XP_003542487.1| PREDICTED: uncharacterized membrane protein ...   398   e-108

>emb|CBI32637.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/252 (83%), Positives = 229/252 (90%)
 Frame = -2

Query: 1230 VCAAVAFGVGLGLKDGVEKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPVMYQSRVLS 1051
            VC AV FGVG+G KDGV KASEFFAGYLLEQSLSVDNLFVFVLIFKYF+VP MYQ RVLS
Sbjct: 107  VCMAVIFGVGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFQVPTMYQGRVLS 166

Query: 1050 YGIAGAVIFRLSIILLGTATLQRFEAVNLLLAAILLFSSYKLFGGEEEETDLSGNFIVKT 871
            YGIAGA+IFRLS+ILLGTATLQRFEAVNLL AAILLFSS+KLF  +E+ETDLS NF+VKT
Sbjct: 167  YGIAGAIIFRLSLILLGTATLQRFEAVNLLFAAILLFSSFKLFAADEDETDLSNNFVVKT 226

Query: 870  CRKFIPVTTDYDGNRFITLQGGTWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 691
            C+KFIPVT +YDGN F+T+Q G WKATPLLLTV VIELSDIAFAVDSIPAVFGVTRDPFI
Sbjct: 227  CQKFIPVTANYDGNLFVTIQDGVWKATPLLLTVVVIELSDIAFAVDSIPAVFGVTRDPFI 286

Query: 690  VFSSNFFAIIGLRSLYALISERMSELEYLQPAIGLVLCFIGSKMIFDFFGYHVSTEISLG 511
            VF+SN FAI+GLRSLY LISE MSELEYLQP+IG+VL FIG KMI DFFG+HVSTE SLG
Sbjct: 287  VFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVLGFIGCKMISDFFGFHVSTEASLG 346

Query: 510  FVATSLSAGVML 475
            FVATSL AGV+L
Sbjct: 347  FVATSLGAGVLL 358


>ref|XP_002276398.1| PREDICTED: uncharacterized membrane protein STKORF319-like [Vitis
            vinifera]
          Length = 389

 Score =  417 bits (1071), Expect = e-114
 Identities = 211/252 (83%), Positives = 229/252 (90%)
 Frame = -2

Query: 1230 VCAAVAFGVGLGLKDGVEKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPVMYQSRVLS 1051
            VC AV FGVG+G KDGV KASEFFAGYLLEQSLSVDNLFVFVLIFKYF+VP MYQ RVLS
Sbjct: 131  VCMAVIFGVGVGFKDGVGKASEFFAGYLLEQSLSVDNLFVFVLIFKYFQVPTMYQGRVLS 190

Query: 1050 YGIAGAVIFRLSIILLGTATLQRFEAVNLLLAAILLFSSYKLFGGEEEETDLSGNFIVKT 871
            YGIAGA+IFRLS+ILLGTATLQRFEAVNLL AAILLFSS+KLF  +E+ETDLS NF+VKT
Sbjct: 191  YGIAGAIIFRLSLILLGTATLQRFEAVNLLFAAILLFSSFKLFAADEDETDLSNNFVVKT 250

Query: 870  CRKFIPVTTDYDGNRFITLQGGTWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 691
            C+KFIPVT +YDGN F+T+Q G WKATPLLLTV VIELSDIAFAVDSIPAVFGVTRDPFI
Sbjct: 251  CQKFIPVTANYDGNLFVTIQDGVWKATPLLLTVVVIELSDIAFAVDSIPAVFGVTRDPFI 310

Query: 690  VFSSNFFAIIGLRSLYALISERMSELEYLQPAIGLVLCFIGSKMIFDFFGYHVSTEISLG 511
            VF+SN FAI+GLRSLY LISE MSELEYLQP+IG+VL FIG KMI DFFG+HVSTE SLG
Sbjct: 311  VFTSNLFAILGLRSLYTLISESMSELEYLQPSIGVVLGFIGCKMISDFFGFHVSTEASLG 370

Query: 510  FVATSLSAGVML 475
            FVATSL AGV+L
Sbjct: 371  FVATSLGAGVLL 382


>ref|XP_002326155.1| predicted protein [Populus trichocarpa] gi|222833348|gb|EEE71825.1|
            predicted protein [Populus trichocarpa]
          Length = 372

 Score =  410 bits (1053), Expect = e-112
 Identities = 206/252 (81%), Positives = 231/252 (91%)
 Frame = -2

Query: 1230 VCAAVAFGVGLGLKDGVEKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPVMYQSRVLS 1051
            VC AVAFG G+GLKDGV KASEFFAGY+LEQSLSVDNLFVFVLIFKYFKVP+MYQ+RVLS
Sbjct: 114  VCTAVAFGFGIGLKDGVGKASEFFAGYILEQSLSVDNLFVFVLIFKYFKVPLMYQNRVLS 173

Query: 1050 YGIAGAVIFRLSIILLGTATLQRFEAVNLLLAAILLFSSYKLFGGEEEETDLSGNFIVKT 871
            YGIAGA+IFRLS+ILLGTATLQRFEAVNL LA ILL+SS+KLF  EE+++DLS NFIVKT
Sbjct: 174  YGIAGAIIFRLSLILLGTATLQRFEAVNLFLATILLYSSFKLFATEEDDSDLSDNFIVKT 233

Query: 870  CRKFIPVTTDYDGNRFITLQGGTWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 691
            C++FIPVT++YDGN+FIT + G WKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI
Sbjct: 234  CQRFIPVTSNYDGNKFITREDGLWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 293

Query: 690  VFSSNFFAIIGLRSLYALISERMSELEYLQPAIGLVLCFIGSKMIFDFFGYHVSTEISLG 511
            VFSSN FAI+GLRSLY LISE M++LEYLQP+I +VL FIG KMI DF G+H+STE SLG
Sbjct: 294  VFSSNLFAILGLRSLYTLISEGMADLEYLQPSIAIVLGFIGCKMILDFMGFHISTEASLG 353

Query: 510  FVATSLSAGVML 475
            FVATSL AGV+L
Sbjct: 354  FVATSLGAGVLL 365


>ref|XP_003536974.1| PREDICTED: uncharacterized membrane protein STKORF319-like [Glycine
            max]
          Length = 363

 Score =  402 bits (1033), Expect = e-110
 Identities = 202/252 (80%), Positives = 229/252 (90%)
 Frame = -2

Query: 1230 VCAAVAFGVGLGLKDGVEKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPVMYQSRVLS 1051
            VC AVAFGVGLG K+G +KASEFFAGY+LEQSLSVDNLFVFVLIF YFKVPV YQ+RVLS
Sbjct: 105  VCTAVAFGVGLGFKEGFDKASEFFAGYILEQSLSVDNLFVFVLIFNYFKVPVAYQNRVLS 164

Query: 1050 YGIAGAVIFRLSIILLGTATLQRFEAVNLLLAAILLFSSYKLFGGEEEETDLSGNFIVKT 871
            YGIAGAV+FRL++IL+GTATLQRFEAVNLLLAAILLFSS+KLF  EE+E+DLS NF+VKT
Sbjct: 165  YGIAGAVVFRLTLILIGTATLQRFEAVNLLLAAILLFSSFKLFASEEDESDLSDNFVVKT 224

Query: 870  CRKFIPVTTDYDGNRFITLQGGTWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 691
            C+KFIPVTT YDGNRFIT   G WKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPF+
Sbjct: 225  CQKFIPVTTYYDGNRFITNLDGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFV 284

Query: 690  VFSSNFFAIIGLRSLYALISERMSELEYLQPAIGLVLCFIGSKMIFDFFGYHVSTEISLG 511
            VF+SN FAI+GLRSL+ +ISE MSEL+YLQP+I +VL F+G KMI D+FG+HVSTE SL 
Sbjct: 285  VFTSNLFAILGLRSLFLIISEGMSELKYLQPSIAIVLGFVGVKMILDYFGFHVSTEASLA 344

Query: 510  FVATSLSAGVML 475
            FVA+SL+ GV+L
Sbjct: 345  FVASSLTIGVVL 356


>ref|XP_003542487.1| PREDICTED: uncharacterized membrane protein STKORF319-like [Glycine
            max]
          Length = 352

 Score =  398 bits (1023), Expect = e-108
 Identities = 203/252 (80%), Positives = 227/252 (90%)
 Frame = -2

Query: 1230 VCAAVAFGVGLGLKDGVEKASEFFAGYLLEQSLSVDNLFVFVLIFKYFKVPVMYQSRVLS 1051
            VC AVAFGVGLG K+G +KASEFFAGY+LEQSLSVDNLFVFVLIF YFKVPV YQ+RVLS
Sbjct: 94   VCTAVAFGVGLGFKEGFDKASEFFAGYILEQSLSVDNLFVFVLIFNYFKVPVTYQNRVLS 153

Query: 1050 YGIAGAVIFRLSIILLGTATLQRFEAVNLLLAAILLFSSYKLFGGEEEETDLSGNFIVKT 871
            YGIAGAV+FRL+IIL+GTATLQRFEAVNLLLAAILL+SS KLF  EE+E+DLS NF+VKT
Sbjct: 154  YGIAGAVVFRLTIILIGTATLQRFEAVNLLLAAILLYSSSKLFASEEDESDLSDNFVVKT 213

Query: 870  CRKFIPVTTDYDGNRFITLQGGTWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFI 691
            C+KFIPVTT YDGNRFIT   G WKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPF+
Sbjct: 214  CQKFIPVTTYYDGNRFITNLDGVWKATPLLLTVAVIELSDIAFAVDSIPAVFGVTRDPFV 273

Query: 690  VFSSNFFAIIGLRSLYALISERMSELEYLQPAIGLVLCFIGSKMIFDFFGYHVSTEISLG 511
            VF+SN FAI+GLRSL+ +ISE MSEL+YLQP+I +VL FIG KMI D+FG HVSTE SL 
Sbjct: 274  VFTSNLFAILGLRSLFLIISEGMSELKYLQPSIAVVLGFIGVKMILDYFGLHVSTEASLA 333

Query: 510  FVATSLSAGVML 475
            FVA+SL+ GV+L
Sbjct: 334  FVASSLTIGVVL 345


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