BLASTX nr result
ID: Coptis25_contig00022707
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022707 (1074 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi... 357 3e-96 ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin... 350 4e-94 ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2... 350 4e-94 ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-lik... 341 2e-91 ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-lik... 340 4e-91 >ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera] gi|297739240|emb|CBI28891.3| unnamed protein product [Vitis vinifera] Length = 354 Score = 357 bits (916), Expect = 3e-96 Identities = 173/222 (77%), Positives = 195/222 (87%) Frame = -2 Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684 GGLPMYVATRGLY+LKPPTIFVPPCIKEDVEKLF+IHR +SQ VGETYE+ Sbjct: 130 GGLPMYVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGETYEM 189 Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504 RN+LVVRPFKTHHVIPSQGY IY++RKKLKKQY HLKGKQIEKLK G+EITD ILSPE+ Sbjct: 190 RNNLVVRPFKTHHVIPSQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDTILSPEV 249 Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324 AFTGDT SDF+L+PRNADALRAK+LITEATFLD GISI+HAR HGHTHLFE+IE+A+W+R Sbjct: 250 AFTGDTRSDFMLEPRNADALRAKVLITEATFLDNGISIDHAREHGHTHLFEIIENAEWIR 309 Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198 N+A+LLTHFSSRY I+DI +AVSKLQ KV +VV L EGFKS Sbjct: 310 NKAVLLTHFSSRYHIEDIRKAVSKLQSKVSARVVPLMEGFKS 351 >ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis] gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast, putative [Ricinus communis] Length = 361 Score = 350 bits (897), Expect = 4e-94 Identities = 168/225 (74%), Positives = 195/225 (86%) Frame = -2 Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684 GGLPMYVA+RGLY+LKPPT+FVPPCIKEDVEKLF+IHR M Q VGETYEL Sbjct: 137 GGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLFDIHRSMGQVELNLELVALDVGETYEL 196 Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504 RN++VVRPF+T HVIPSQGY IYS+RKKLKKQYTHLKGKQIEKLKK GVEITD++LSPE+ Sbjct: 197 RNNVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYTHLKGKQIEKLKKSGVEITDIMLSPEV 256 Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324 AFTGDTT++++LDP NADALRAK+LITEATFLD G SIEHAR+HGHTHL E+IE+A+W+R Sbjct: 257 AFTGDTTAEYMLDPHNADALRAKVLITEATFLDEGFSIEHARQHGHTHLLEIIENAEWIR 316 Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKSAES 189 N+++LLTHFSSRY ++DI +AV KLQ KV KVV L EGFKS S Sbjct: 317 NKSVLLTHFSSRYTVEDIRQAVLKLQSKVSAKVVPLTEGFKSTYS 361 >ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1| predicted protein [Populus trichocarpa] Length = 366 Score = 350 bits (897), Expect = 4e-94 Identities = 172/225 (76%), Positives = 194/225 (86%) Frame = -2 Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684 GGLPMYVA+RGLYSLKPPTIFVPPCIK+DVEKLF+IHR M Q VGETYEL Sbjct: 142 GGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFDIHRAMGQVELNFDLVALDVGETYEL 201 Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504 RND+VVRPF+T HVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD+ILSPE+ Sbjct: 202 RNDVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEV 261 Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324 AFTGDTT++++LDPRNADALRAK+LITEATFLD + EHAR+ GHTHLFE+IE+AKW+R Sbjct: 262 AFTGDTTAEYMLDPRNADALRAKVLITEATFLDEDFTTEHARQRGHTHLFEIIENAKWIR 321 Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKSAES 189 ++AILLTHFSSRY I+DI EAVSKLQ +V KVV L EGFKS S Sbjct: 322 SKAILLTHFSSRYSIEDIREAVSKLQSRVSAKVVPLTEGFKSMYS 366 >ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus] Length = 347 Score = 341 bits (875), Expect = 2e-91 Identities = 169/222 (76%), Positives = 188/222 (84%) Frame = -2 Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684 GGLPMYVA+RGLYSL PPT+F+P IKEDVEKL EIHR M Q VGETYE+ Sbjct: 124 GGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEM 183 Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504 RN+LV R F+THHVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+ Sbjct: 184 RNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEV 243 Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324 AFTGDTT DF+LDPRNADALRAKILITEATFLD +SIEHAR+HGHTH+FE+IE+A+W+R Sbjct: 244 AFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIR 303 Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198 N+AILLTHFSSRY I+DI +AVSKLQ V KVV L EGFKS Sbjct: 304 NKAILLTHFSSRYHIEDIRKAVSKLQSNVTAKVVPLTEGFKS 345 >ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus] Length = 347 Score = 340 bits (872), Expect = 4e-91 Identities = 168/222 (75%), Positives = 188/222 (84%) Frame = -2 Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684 GGLPMYVA+RGLYSL PPT+F+P IKEDVEKL EIHR M Q VGETYE+ Sbjct: 124 GGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEM 183 Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504 RN+LV R F+THHVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+ Sbjct: 184 RNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEV 243 Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324 AFTGDTT DF+LDPRNADALRAKILITEATFLD +SIEHAR+HGHTH+FE+IE+A+W+R Sbjct: 244 AFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIR 303 Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198 N+AILLTHFSSRY I+DI +AVSKLQ + KVV L EGFKS Sbjct: 304 NKAILLTHFSSRYHIEDIRKAVSKLQSNLTAKVVPLTEGFKS 345