BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022707
         (1074 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vi...   357   3e-96
ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricin...   350   4e-94
ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|2...   350   4e-94
ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   341   2e-91
ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-lik...   340   4e-91

>ref|XP_002277241.1| PREDICTED: ribonuclease Z, chloroplastic [Vitis vinifera]
           gi|297739240|emb|CBI28891.3| unnamed protein product
           [Vitis vinifera]
          Length = 354

 Score =  357 bits (916), Expect = 3e-96
 Identities = 173/222 (77%), Positives = 195/222 (87%)
 Frame = -2

Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684
           GGLPMYVATRGLY+LKPPTIFVPPCIKEDVEKLF+IHR +SQ           VGETYE+
Sbjct: 130 GGLPMYVATRGLYNLKPPTIFVPPCIKEDVEKLFDIHRALSQVELKLDLVALDVGETYEM 189

Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504
           RN+LVVRPFKTHHVIPSQGY IY++RKKLKKQY HLKGKQIEKLK  G+EITD ILSPE+
Sbjct: 190 RNNLVVRPFKTHHVIPSQGYVIYTVRKKLKKQYIHLKGKQIEKLKNSGIEITDTILSPEV 249

Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324
           AFTGDT SDF+L+PRNADALRAK+LITEATFLD GISI+HAR HGHTHLFE+IE+A+W+R
Sbjct: 250 AFTGDTRSDFMLEPRNADALRAKVLITEATFLDNGISIDHAREHGHTHLFEIIENAEWIR 309

Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198
           N+A+LLTHFSSRY I+DI +AVSKLQ KV  +VV L EGFKS
Sbjct: 310 NKAVLLTHFSSRYHIEDIRKAVSKLQSKVSARVVPLMEGFKS 351


>ref|XP_002528949.1| ribonuclease z, chloroplast, putative [Ricinus communis]
           gi|223531595|gb|EEF33423.1| ribonuclease z, chloroplast,
           putative [Ricinus communis]
          Length = 361

 Score =  350 bits (897), Expect = 4e-94
 Identities = 168/225 (74%), Positives = 195/225 (86%)
 Frame = -2

Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684
           GGLPMYVA+RGLY+LKPPT+FVPPCIKEDVEKLF+IHR M Q           VGETYEL
Sbjct: 137 GGLPMYVASRGLYNLKPPTVFVPPCIKEDVEKLFDIHRSMGQVELNLELVALDVGETYEL 196

Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504
           RN++VVRPF+T HVIPSQGY IYS+RKKLKKQYTHLKGKQIEKLKK GVEITD++LSPE+
Sbjct: 197 RNNVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYTHLKGKQIEKLKKSGVEITDIMLSPEV 256

Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324
           AFTGDTT++++LDP NADALRAK+LITEATFLD G SIEHAR+HGHTHL E+IE+A+W+R
Sbjct: 257 AFTGDTTAEYMLDPHNADALRAKVLITEATFLDEGFSIEHARQHGHTHLLEIIENAEWIR 316

Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKSAES 189
           N+++LLTHFSSRY ++DI +AV KLQ KV  KVV L EGFKS  S
Sbjct: 317 NKSVLLTHFSSRYTVEDIRQAVLKLQSKVSAKVVPLTEGFKSTYS 361


>ref|XP_002321158.1| predicted protein [Populus trichocarpa] gi|222861931|gb|EEE99473.1|
           predicted protein [Populus trichocarpa]
          Length = 366

 Score =  350 bits (897), Expect = 4e-94
 Identities = 172/225 (76%), Positives = 194/225 (86%)
 Frame = -2

Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684
           GGLPMYVA+RGLYSLKPPTIFVPPCIK+DVEKLF+IHR M Q           VGETYEL
Sbjct: 142 GGLPMYVASRGLYSLKPPTIFVPPCIKDDVEKLFDIHRAMGQVELNFDLVALDVGETYEL 201

Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504
           RND+VVRPF+T HVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD+ILSPE+
Sbjct: 202 RNDVVVRPFRTQHVIPSQGYVIYSVRKKLKKQYIHLKGKQIEKLKKSGVEITDIILSPEV 261

Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324
           AFTGDTT++++LDPRNADALRAK+LITEATFLD   + EHAR+ GHTHLFE+IE+AKW+R
Sbjct: 262 AFTGDTTAEYMLDPRNADALRAKVLITEATFLDEDFTTEHARQRGHTHLFEIIENAKWIR 321

Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKSAES 189
           ++AILLTHFSSRY I+DI EAVSKLQ +V  KVV L EGFKS  S
Sbjct: 322 SKAILLTHFSSRYSIEDIREAVSKLQSRVSAKVVPLTEGFKSMYS 366


>ref|XP_004156084.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  341 bits (875), Expect = 2e-91
 Identities = 169/222 (76%), Positives = 188/222 (84%)
 Frame = -2

Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684
           GGLPMYVA+RGLYSL PPT+F+P  IKEDVEKL EIHR M Q           VGETYE+
Sbjct: 124 GGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEM 183

Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504
           RN+LV R F+THHVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+
Sbjct: 184 RNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEV 243

Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324
           AFTGDTT DF+LDPRNADALRAKILITEATFLD  +SIEHAR+HGHTH+FE+IE+A+W+R
Sbjct: 244 AFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIR 303

Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198
           N+AILLTHFSSRY I+DI +AVSKLQ  V  KVV L EGFKS
Sbjct: 304 NKAILLTHFSSRYHIEDIRKAVSKLQSNVTAKVVPLTEGFKS 345


>ref|XP_004140131.1| PREDICTED: ribonuclease Z, chloroplastic-like [Cucumis sativus]
          Length = 347

 Score =  340 bits (872), Expect = 4e-91
 Identities = 168/222 (75%), Positives = 188/222 (84%)
 Frame = -2

Query: 863 GGLPMYVATRGLYSLKPPTIFVPPCIKEDVEKLFEIHRKMSQXXXXXXXXXXXVGETYEL 684
           GGLPMYVA+RGLYSL PPT+F+P  IKEDVEKL EIHR M Q           VGETYE+
Sbjct: 124 GGLPMYVASRGLYSLSPPTVFLPASIKEDVEKLLEIHRNMGQVELDVDLVALDVGETYEM 183

Query: 683 RNDLVVRPFKTHHVIPSQGYAIYSIRKKLKKQYTHLKGKQIEKLKKQGVEITDVILSPEM 504
           RN+LV R F+THHVIPSQGY IYS+RKKLKKQY HLKGKQIEKLKK GVEITD ILSPE+
Sbjct: 184 RNNLVCRAFETHHVIPSQGYVIYSVRKKLKKQYMHLKGKQIEKLKKSGVEITDTILSPEV 243

Query: 503 AFTGDTTSDFLLDPRNADALRAKILITEATFLDGGISIEHARRHGHTHLFELIEHAKWMR 324
           AFTGDTT DF+LDPRNADALRAKILITEATFLD  +SIEHAR+HGHTH+FE+IE+A+W+R
Sbjct: 244 AFTGDTTPDFMLDPRNADALRAKILITEATFLDEAVSIEHARQHGHTHIFEIIENAQWIR 303

Query: 323 NEAILLTHFSSRYKIQDIDEAVSKLQQKVPGKVVALKEGFKS 198
           N+AILLTHFSSRY I+DI +AVSKLQ  +  KVV L EGFKS
Sbjct: 304 NKAILLTHFSSRYHIEDIRKAVSKLQSNLTAKVVPLTEGFKS 345