BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022696
         (673 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containi...   229   5e-58
ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containi...   228   6e-58
ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containi...   217   2e-54
ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containi...   212   5e-53
ref|XP_002520999.1| pentatricopeptide repeat-containing protein,...   211   1e-52

>ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  229 bits (583), Expect = 5e-58
 Identities = 110/225 (48%), Positives = 151/225 (67%), Gaps = 3/225 (1%)
 Frame = -2

Query: 672 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
           G IT  +A  FFD M+  +P PP+S+FN +LG L +I HY  + ++Y  M   GL PD  
Sbjct: 68  GNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLF 127

Query: 492 TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKM 313
           TL+IL NC C  +RV   LA    +LRRGY+PN VTYT LIKG C E R+ +AT +F++M
Sbjct: 128 TLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRM 187

Query: 312 GQQSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSD---SCKPNVVIYSIVIDG 142
            Q+ GC  N +TYGTL+ G C++G+    LKL +EM+ND S    +CKP V+ YSI+IDG
Sbjct: 188 -QKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDG 246

Query: 141 LCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
           LCK G  +EAK+LF +M +  + PDV++Y+ LI G C A KW+++
Sbjct: 247 LCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQS 291



 Score =  124 bits (311), Expect = 2e-26
 Identities = 70/218 (32%), Positives = 113/218 (51%)
 Frame = -2

Query: 654 EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
           EA   F+ M      P V +++ ++        +D    ++  MV  G+ PD VT ++L+
Sbjct: 255 EAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLI 314

Query: 474 NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGC 295
           +  C   +V     +   M++RG VPN +TY +LI GFC  G +  A  +F+ M    G 
Sbjct: 315 DTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSM-PSKGL 373

Query: 294 RRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEE 115
             + I+Y TL+NG+C++   +  + L  EM+  G     PNV  Y  ++ GL ++G + +
Sbjct: 374 EPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGK---SPNVTTYGTLLKGLFQKGKVGD 430

Query: 114 AKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAIE 1
           AKKLF  M +  +S +   Y   +DGLCK D   EA+E
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAME 468



 Score =  114 bits (286), Expect = 1e-23
 Identities = 72/258 (27%), Positives = 125/258 (48%), Gaps = 34/258 (13%)
 Frame = -2

Query: 672  GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
            GK+T  EA    + MI     P + T+N ++     +   ++   ++  M S GL PD +
Sbjct: 321  GKVT--EAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEI 378

Query: 492  TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDAT------ 331
            +   L+N +C + +V   + ++ +ML+ G  PN  TY  L+KG  ++G++ DA       
Sbjct: 379  SYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVM 438

Query: 330  ------------GIFMKMGQQSGC----------------RRNVITYGTLVNGFCRSGHS 235
                        GIF+    ++ C                + N+  Y  L++G C++G  
Sbjct: 439  KTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKL 498

Query: 234  EFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAY 55
            E   +L  ++  +G    +P+VV Y+I+I G CK G ++ A  LF  M     +PD++AY
Sbjct: 499  ETAWELFEKLSQEG---LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAY 555

Query: 54   NCLIDGLCKADKWEEAIE 1
            N L+ G C+ +K EE I+
Sbjct: 556  NTLLCGFCEGNKLEEVIK 573



 Score =  112 bits (281), Expect = 5e-23
 Identities = 64/220 (29%), Positives = 120/220 (54%)
 Frame = -2

Query: 666 ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
           + LH+ M    S   +N  P V T+++++  L ++   D    +++ M + G+ PD ++ 
Sbjct: 216 LKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISY 275

Query: 486 NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
           + L++ FC + +      +F +M+ +G  P+ VT++ LI   CKEG++ +A  +   M Q
Sbjct: 276 STLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQ 335

Query: 306 QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEG 127
           + G   N+ITY +L++GFC  G      +L   M + G    +P+ + Y+ +I+G CK  
Sbjct: 336 R-GIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKG---LEPDEISYTTLINGYCKTW 391

Query: 126 FIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
            ++EA  L+++M+    SP+V  Y  L+ GL +  K  +A
Sbjct: 392 KVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDA 431



 Score =  103 bits (258), Expect = 2e-20
 Identities = 55/218 (25%), Positives = 113/218 (51%)
 Frame = -2

Query: 654  EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
            EAM  ++ M+ +   P V+T+  +L  L +         ++  M + G+  +     I L
Sbjct: 395  EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 474  NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGC 295
            +  C +  +   + +F ++    +  N   Y+ LI G CK G+++ A  +F K+ Q+ G 
Sbjct: 455  DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQE-GL 513

Query: 294  RRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEE 115
            + +V+TY  +++GFC+ G  +    L  +M  +G   C P+++ Y+ ++ G C+   +EE
Sbjct: 514  QPDVVTYNIMIHGFCKVGQVDNANILFEKMEENG---CTPDIIAYNTLLCGFCEGNKLEE 570

Query: 114  AKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAIE 1
              KL   M+   +SP+  +   ++D LCK +K+++ ++
Sbjct: 571  VIKLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVD 608



 Score = 58.5 bits (140), Expect = 1e-06
 Identities = 31/119 (26%), Positives = 60/119 (50%)
 Frame = -2

Query: 660 LHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNI 481
           L EAM  F+ +   N    +  ++ ++  L +    +T   +++++   GL PD VT NI
Sbjct: 463 LFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNI 522

Query: 480 LLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQ 304
           +++ FC   +V     +F  M   G  P+ + Y  L+ GFC+  ++++   +  KM Q+
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQK 581


>ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
           gi|297735515|emb|CBI17955.3| unnamed protein product
           [Vitis vinifera]
          Length = 627

 Score =  228 bits (582), Expect = 6e-58
 Identities = 111/225 (49%), Positives = 156/225 (69%), Gaps = 3/225 (1%)
 Frame = -2

Query: 672 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
           G I   EA   F+ +I + P PP+S+FN +LGA+ +IK Y  VI++YKRM  +GL PD++
Sbjct: 69  GHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFI 128

Query: 492 TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKM 313
           TLNIL+NC+C  ++V  GLAV G+MLRRG+ PNTVT+T+L+KG C   R+ +ATG+  KM
Sbjct: 129 TLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKM 188

Query: 312 GQQSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSD---SCKPNVVIYSIVIDG 142
             + G R NV+TYGTL+NG C +G++   +KL  EM+N       + KPN+V Y  +ID 
Sbjct: 189 -VRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDS 247

Query: 141 LCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
           LCK+G I++ K+LF +M    ISPDVVAY+ +I G+C   +WE A
Sbjct: 248 LCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGA 292



 Score =  126 bits (316), Expect = 4e-27
 Identities = 78/218 (35%), Positives = 111/218 (50%), Gaps = 1/218 (0%)
 Frame = -2

Query: 651 AMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILLN 472
           A G F+ M+     P V TFN+++ AL +    +    + K M+  G  PD  T N L++
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLID 351

Query: 471 CFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGCR 292
            FC+  R+     +F  M  +G   + V+Y  LI G+CK GRM +A  ++ +M       
Sbjct: 352 GFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREM-MCKEIM 410

Query: 291 RNVITYGTLVNGFCRSGHSEFGLKLIREM-VNDGSDSCKPNVVIYSIVIDGLCKEGFIEE 115
             VITY TL+ G  R G       L  EM V+D      P    Y+I++DGLCK   + E
Sbjct: 411 PTVITYNTLLTGLFREGKVRDAWNLFGEMKVHD----LTPESCTYNILLDGLCKNNHLSE 466

Query: 114 AKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAIE 1
           A +LF  + +    P +  +NCLIDGLCKA K E A E
Sbjct: 467 AMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARE 504



 Score =  112 bits (279), Expect = 9e-23
 Identities = 62/218 (28%), Positives = 112/218 (51%)
 Frame = -2

Query: 660 LHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNI 481
           + EA      MI     P   T+N ++         D    ++  M S G+  D V+ N+
Sbjct: 324 MEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNV 383

Query: 480 LLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQS 301
           L+N +C S R+     ++ +M+ +  +P  +TY  L+ G  +EG+++DA  +F +M +  
Sbjct: 384 LINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEM-KVH 442

Query: 300 GCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFI 121
                  TY  L++G C++ H    ++L   + N      +P++ I++ +IDGLCK   I
Sbjct: 443 DLTPESCTYNILLDGLCKNNHLSEAMELFHYLEN---HDFQPSIQIFNCLIDGLCKARKI 499

Query: 120 EEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
           E A++LF+ +    + P+V+ Y  +I GLCK+ + E A
Sbjct: 500 EIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENA 537



 Score =  108 bits (271), Expect = 7e-22
 Identities = 66/220 (30%), Positives = 113/220 (51%)
 Frame = -2

Query: 666 ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
           + LHE M   +    +   P +  +  ++ +L +    D    ++  M   G+ PD V  
Sbjct: 217 VKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAY 276

Query: 486 NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
           + +++  C + R      +F +M+  G  PN VT+  LI   CK G+M++A  + +K+  
Sbjct: 277 SSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHL-LKLMI 335

Query: 306 QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEG 127
           Q G   +  TY TL++GFC  G  +    L   M + G ++   + V Y+++I+G CK G
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIET---DAVSYNVLINGYCKSG 392

Query: 126 FIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
            + EAKKL+ +MM  +I P V+ YN L+ GL +  K  +A
Sbjct: 393 RMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDA 432



 Score = 95.9 bits (237), Expect = 6e-18
 Identities = 58/215 (26%), Positives = 102/215 (47%)
 Frame = -2

Query: 654  EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
            EA   +  M+     P V T+N +L  L R         ++  M    L P+  T NILL
Sbjct: 396  EAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILL 455

Query: 474  NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGC 295
            +  C ++ +   + +F  +    + P+   +  LI G CK  +++ A  +F ++  + G 
Sbjct: 456  DGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHE-GL 514

Query: 294  RRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEE 115
              NVITY  +++G C+SG  E    L   M   G   C PN+V ++ ++ G C+   +++
Sbjct: 515  EPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKG---CAPNLVTFNTLMRGFCQNDEMQK 571

Query: 114  AKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEE 10
              +L  +M     SPD    + ++D L K +K+ E
Sbjct: 572  VVELLQEMAEKDFSPDASTISIVVDLLSKDEKYRE 606



 Score = 92.4 bits (228), Expect = 7e-17
 Identities = 47/177 (26%), Positives = 92/177 (51%)
 Frame = -2

Query: 660 LHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNI 481
           + +A   F  M + +  P   T+N++L  L +  H    + ++  + +    P     N 
Sbjct: 429 VRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNC 488

Query: 480 LLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQS 301
           L++  C + ++ +   +F  +   G  PN +TYT +I G CK G++++A  +F+ M ++ 
Sbjct: 489 LIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGM-EEK 547

Query: 300 GCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKE 130
           GC  N++T+ TL+ GFC++   +  ++L++EM         P+    SIV+D L K+
Sbjct: 548 GCAPNLVTFNTLMRGFCQNDEMQKVVELLQEM---AEKDFSPDASTISIVVDLLSKD 601


>ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  217 bits (552), Expect = 2e-54
 Identities = 108/225 (48%), Positives = 148/225 (65%), Gaps = 3/225 (1%)
 Frame = -2

Query: 672 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
           G +T   A+ FF  M+   P P +S+FN +L  L +IKHY  V ++Y +M   GL  D  
Sbjct: 46  GNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRC 105

Query: 492 TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKM 313
           TLNILLNC C  +R+  G A F  +LRRGY PN VTY  LIKG C E R+ +AT +F++M
Sbjct: 106 TLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRM 165

Query: 312 GQQSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSD---SCKPNVVIYSIVIDG 142
            Q+ GC  +V+TYGTL+ G C +G+    LKL +EM+ND S    +CKPNV+ Y+I++DG
Sbjct: 166 -QKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDG 224

Query: 141 LCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
           LCK G  +EAK+LF +M +  + P +++YN LI G C A KWEE+
Sbjct: 225 LCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEES 269



 Score =  127 bits (318), Expect = 3e-27
 Identities = 71/218 (32%), Positives = 115/218 (52%)
 Frame = -2

Query: 654 EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
           EA   F+ M      P + ++N ++        ++    +   M+  GL PD VT N+L+
Sbjct: 233 EAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLI 292

Query: 474 NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGC 295
           +  C   +V     + G M+  G VP+ VTY +LI+GFC  G +  A  +F+ M    GC
Sbjct: 293 DTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSM-PSKGC 351

Query: 294 RRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEE 115
             +VI+Y  L+NG+ ++   E  +KL  EM+  G    +PNV+ Y  ++ G+   G +++
Sbjct: 352 EPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGK---RPNVITYDSLLKGIFLAGKVDD 408

Query: 114 AKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAIE 1
           AKKLFS M +  I+ +   Y   +DGLCK D   EA++
Sbjct: 409 AKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMK 446



 Score =  115 bits (288), Expect = 8e-24
 Identities = 65/220 (29%), Positives = 121/220 (55%)
 Frame = -2

Query: 666 ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
           + LH+ M    S   +N  P V T+N+++  L ++   D    +++ M + G+ P  ++ 
Sbjct: 194 LKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISY 253

Query: 486 NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
           N L++ FC + +      +  +ML +G  P+ VT+  LI   CKEG++ +A  +   M  
Sbjct: 254 NSLIHGFCCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVM-I 312

Query: 306 QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEG 127
           +SG   +++TY +L+ GFC  G      +L   M + G   C+P+V+ Y+++I+G  K  
Sbjct: 313 ESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKG---CEPDVISYNVLINGYSKTL 369

Query: 126 FIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
            +EEA KL+++M+     P+V+ Y+ L+ G+  A K ++A
Sbjct: 370 KVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDA 409



 Score =  108 bits (269), Expect = 1e-21
 Identities = 67/253 (26%), Positives = 119/253 (47%), Gaps = 35/253 (13%)
 Frame = -2

Query: 654  EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
            EA      MI     P + T+N ++     +   ++   ++  M S G  PD ++ N+L+
Sbjct: 303  EAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLI 362

Query: 474  NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQSGC 295
            N +  + +V   + ++ +ML  G  PN +TY +L+KG    G++ DA  +F  M +  G 
Sbjct: 363  NGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVM-KAHGI 421

Query: 294  RRNVITYGT-----------------------------------LVNGFCRSGHSEFGLK 220
              N  TYG                                    L++G C++G  E   +
Sbjct: 422  AENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWE 481

Query: 219  LIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLID 40
            L  ++ N+G +   PNVV Y+I+I G C+EG +++A  L   M +   +PD++ YN L+ 
Sbjct: 482  LFEKLSNEGHE---PNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMR 538

Query: 39   GLCKADKWEEAIE 1
            G  +++K EE ++
Sbjct: 539  GFYESNKLEEVVQ 551



 Score = 99.8 bits (247), Expect = 4e-19
 Identities = 56/221 (25%), Positives = 111/221 (50%)
 Frame = -2

Query: 666  ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
            + + EAM  ++ M+L+   P V T++ +L  +      D    ++  M + G+  +  T 
Sbjct: 369  LKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTY 428

Query: 486  NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
             I L+  C +  +   + +F ++    +         LI G CK G+++ A  +F K+  
Sbjct: 429  GIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSN 488

Query: 306  QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEG 127
            + G   NV+TY  +++GFCR G  +    LI++M  +G   C P+++ Y+ ++ G  +  
Sbjct: 489  E-GHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG---CTPDIITYNTLMRGFYESN 544

Query: 126  FIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAI 4
             +EE  +L   M    +SPD +  + ++D L K +K++E +
Sbjct: 545  KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 585


>ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
           gi|449492643|ref|XP_004159059.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  212 bits (540), Expect = 5e-53
 Identities = 107/218 (49%), Positives = 151/218 (69%), Gaps = 3/218 (1%)
 Frame = -2

Query: 672 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
           G IT  +A+ FFD M+       + +FNL+LGAL +IKHY  V ++YK+M   GL P++ 
Sbjct: 73  GNITSTQALQFFDLMMR-----SIISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFF 127

Query: 492 TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKM 313
           TLNIL+NC C  +RV  GL+    ++RRGY+P+ VTYT+LIKG C E R+ +AT +F++M
Sbjct: 128 TLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM 187

Query: 312 GQQSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSD---SCKPNVVIYSIVIDG 142
            Q+ GC  NV+TYGTL+ G CR+G+    LKL +EM+N  S    +CKPN+  Y+I+ID 
Sbjct: 188 -QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDE 246

Query: 141 LCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCK 28
           LCK G  +EAK+LF++M+   + PDVV ++ LID LCK
Sbjct: 247 LCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCK 284



 Score =  127 bits (319), Expect = 2e-27
 Identities = 77/254 (30%), Positives = 124/254 (48%), Gaps = 32/254 (12%)
 Frame = -2

Query: 666 ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
           + LH+ M    S   +N  P + ++N+++  L +I  +     ++  MV  G+ PD VT 
Sbjct: 216 LKLHQEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTF 275

Query: 486 NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
           + L++  C    V         M+ RG VP+  T+T+LI+GFC  G +  A  +F+ M  
Sbjct: 276 SALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSM-P 334

Query: 306 QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGS--------------------- 190
             G   +VI+Y  L+ G+C++ + E  +KL  EM+  G                      
Sbjct: 335 SKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVG 394

Query: 189 -----------DSCKPNVVIYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLI 43
                       +   N+ I S+ +DGLCK G + EA +LF+++ S  +  D+ ++NCLI
Sbjct: 395 DAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLI 454

Query: 42  DGLCKADKWEEAIE 1
           DGLCKA K E A E
Sbjct: 455 DGLCKARKLETAWE 468



 Score = 93.2 bits (230), Expect = 4e-17
 Identities = 60/252 (23%), Positives = 117/252 (46%), Gaps = 34/252 (13%)
 Frame = -2

Query: 654  EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
            EA  F ++M+L    P + TF  ++     +   D+   ++  M S G  PD ++  +L+
Sbjct: 290  EAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLI 349

Query: 474  NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDAT------------ 331
              +C +  V   + ++ +MLR G  P+  T+  L+KG    G++ DA             
Sbjct: 350  YGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVP 409

Query: 330  ------GIFMKMGQQSGC----------------RRNVITYGTLVNGFCRSGHSEFGLKL 217
                   +F+    ++GC                + ++ ++  L++G C++   E   +L
Sbjct: 410  KNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWEL 469

Query: 216  IREMVNDGSDSCKPNVVIYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDG 37
              ++  +G    +P+VV Y I+I+G CK G ++ A  LF  M     +P+++ Y+ L+ G
Sbjct: 470  FEKLSQEG---LQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHG 526

Query: 36   LCKADKWEEAIE 1
              K +K EE ++
Sbjct: 527  FYKNNKLEEVVK 538



 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 51/220 (23%), Positives = 105/220 (47%)
 Frame = -2

Query: 660  LHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNI 481
            + EAM  ++ M+ +  +P + TF ++L  L           ++  +    +  +    ++
Sbjct: 358  VEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSV 417

Query: 480  LLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQS 301
             L+  C +  +   + +F ++       +  ++  LI G CK  +++ A  +F K+ Q+ 
Sbjct: 418  FLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQE- 476

Query: 300  GCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEGFI 121
            G + +V+TY  ++NGFC++G  +    L + M  +G   C PN++ YS ++ G  K   +
Sbjct: 477  GLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENG---CTPNLLTYSALLHGFYKNNKL 533

Query: 120  EEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEAIE 1
            EE  KL   M+   +S     Y  + D + K +K  E ++
Sbjct: 534  EEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLD 573


>ref|XP_002520999.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223539836|gb|EEF41416.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 628

 Score =  211 bits (536), Expect = 1e-52
 Identities = 109/225 (48%), Positives = 145/225 (64%), Gaps = 3/225 (1%)
 Frame = -2

Query: 672 GKITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYV 493
           G  TLHEA+ FF+ MI +   P +S FN + GAL + K Y  VI+M  RM S+GL  +++
Sbjct: 84  GDFTLHEALHFFNQMIHMQTTPALSRFNNLFGALAKKKQYLHVISMCGRMNSIGLLKNFI 143

Query: 492 TLNILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKM 313
           +LNILLNC C   RV  G  VFG +LR+GY PNT T+T L+KG C EG++ +A  +F  M
Sbjct: 144 SLNILLNCLCSVKRVFEGFVVFGMILRKGYRPNTRTFTNLVKGLCLEGKIGEAVRVFKIM 203

Query: 312 GQQSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSD---SCKPNVVIYSIVIDG 142
           G    CR + IT G L++G CR+G++   LKL   M+N  SD   +CKP VV YS +ID 
Sbjct: 204 G-VFDCRPSAITCGVLISGLCRTGNTCNALKLHEAMINGNSDFGINCKPTVVSYSCIIDS 262

Query: 141 LCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKADKWEEA 7
           LCK+G +E AK+ F +M    I P+VV Y  L+ GLC A +WEEA
Sbjct: 263 LCKDGLVERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEA 307



 Score =  109 bits (273), Expect = 4e-22
 Identities = 69/248 (27%), Positives = 116/248 (46%), Gaps = 28/248 (11%)
 Frame = -2

Query: 660  LHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNI 481
            +  A  FF  M     FP V T+  +L  L     ++    ++  MV  GL PD VT ++
Sbjct: 269  VERAKEFFVEMKEKGIFPNVVTYTSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSV 328

Query: 480  LLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQQS 301
            L+   C   +V     +F  M++R   P+T TY  LI+G+C  G + +   IF+ M  + 
Sbjct: 329  LIGALCKVGKVKEASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKR 388

Query: 300  GCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVV--------------- 166
             C+ +  +Y  L+  +C+       + L REM++ G    +P V+               
Sbjct: 389  -CQHDAGSYSILMKAYCKDSEVHGAMILYREMMDRG---IQPTVITYSKVGDARKLFGEI 444

Query: 165  -------------IYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKA 25
                         IY++ +DGLCK G + EA  +F  + + K + +V  +N LI+G+C++
Sbjct: 445  QFQDMVLDSISYSIYNVYLDGLCKNGCVSEALDVFYGLENCKFASNVAIFNSLINGMCRS 504

Query: 24   DKWEEAIE 1
            +K E A E
Sbjct: 505  EKLEIAWE 512



 Score =  101 bits (252), Expect = 1e-19
 Identities = 62/205 (30%), Positives = 107/205 (52%)
 Frame = -2

Query: 666 ITLHEAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTL 487
           + LHEAM   +S   +N  P V +++ ++ +L +    +     +  M   G+FP+ VT 
Sbjct: 232 LKLHEAMINGNSDFGINCKPTVVSYSCIIDSLCKDGLVERAKEFFVEMKEKGIFPNVVTY 291

Query: 486 NILLNCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTALIKGFCKEGRMKDATGIFMKMGQ 307
             LL+  C +S       +F +M+  G +P+ VT++ LI   CK G++K+A+G+F  M Q
Sbjct: 292 TSLLHGLCSASEWEEAKRLFIEMVDHGLLPDVVTFSVLIGALCKVGKVKEASGLFDLMVQ 351

Query: 306 QSGCRRNVITYGTLVNGFCRSGHSEFGLKLIREMVNDGSDSCKPNVVIYSIVIDGLCKEG 127
           +     +  TY  L+ G+C +G  + G K+   MVN     C+ +   YSI++   CK+ 
Sbjct: 352 RY-VEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVN---KRCQHDAGSYSILMKAYCKDS 407

Query: 126 FIEEAKKLFSDMMSTKISPDVVAYN 52
            +  A  L+ +MM   I P V+ Y+
Sbjct: 408 EVHGAMILYREMMDRGIQPTVITYS 432



 Score = 96.3 bits (238), Expect = 5e-18
 Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 30/248 (12%)
 Frame = -2

Query: 654  EAMGFFDSMILLNPFPPVSTFNLVLGALTRIKHYDTVITMYKRMVSLGLFPDYVTLNILL 475
            EA G FD M+     P   T+N+++         D    ++  MV+     D  + +IL+
Sbjct: 341  EASGLFDLMVQRYVEPSTRTYNILIEGYCLAGMVDEGKKIFLSMVNKRCQHDAGSYSILM 400

Query: 474  NCFCVSSRVCVGLAVFGDMLRRGYVPNTVTYTAL-------------------------- 373
              +C  S V   + ++ +M+ RG  P  +TY+ +                          
Sbjct: 401  KAYCKDSEVHGAMILYREMMDRGIQPTVITYSKVGDARKLFGEIQFQDMVLDSISYSIYN 460

Query: 372  --IKGFCKEGRMKDATGIFMKMGQQSGCR--RNVITYGTLVNGFCRSGHSEFGLKLIREM 205
              + G CK G + +A  +F  +     C+   NV  + +L+NG CRS   E   +L   +
Sbjct: 461  VYLDGLCKNGCVSEALDVFYGL---ENCKFASNVAIFNSLINGMCRSEKLEIAWELFNRL 517

Query: 204  VNDGSDSCKPNVVIYSIVIDGLCKEGFIEEAKKLFSDMMSTKISPDVVAYNCLIDGLCKA 25
             N+   + +P+VV Y+I+I GLCK G  ++A  LF +M     +P+VV +N L+ GLC  
Sbjct: 518  CNE---ALQPDVVTYTIMIYGLCKVGQPQKAYDLFLEMEEKGCAPNVVTFNTLMRGLCLN 574

Query: 24   DKWEEAIE 1
             +  + +E
Sbjct: 575  SERPKIVE 582