BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022687
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat an...   213   5e-93
ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communi...   216   7e-93
ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding...   204   1e-88
ref|XP_003595690.1| WD repeat-containing protein [Medicago trunc...   200   2e-88
ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding...   206   1e-87

>ref|XP_002273412.2| PREDICTED: LOW QUALITY PROTEIN: WD repeat and HMG-box DNA-binding
           protein 1-like [Vitis vinifera]
          Length = 965

 Score =  213 bits (543), Expect(2) = 5e-93
 Identities = 98/130 (75%), Positives = 114/130 (87%)
 Frame = -1

Query: 392 PIGEYLSSVDSFGTVVFWELCTGKVLYTLKGVAPDSGSDTSVSAVLSWSPDGDVLAVPGL 213
           P GEYL+SVDS GTV+ WEL +G  L+ LKG+APD+GSD SV   LSWSPDG+ LAVPGL
Sbjct: 155 PNGEYLASVDSIGTVIQWELHSGTALHILKGIAPDTGSDLSVLNALSWSPDGETLAVPGL 214

Query: 212 KGDVVMYDRDTAEKLFSLKGEHDKSVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDR 33
           + DVVMYDRDTAEKLFSL+G+H + +CF+SWSPNGKY+AT+GLDRQ+LIWDVDQRQDIDR
Sbjct: 215 RNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGKYMATAGLDRQILIWDVDQRQDIDR 274

Query: 32  QKFDDRISCM 3
           QKFDDRI CM
Sbjct: 275 QKFDDRICCM 284



 Score =  154 bits (388), Expect(2) = 5e-93
 Identities = 75/86 (87%), Positives = 80/86 (93%)
 Frame = -3

Query: 678 AISPNSTCLASASIDHSVKLYRFPGGEFQTNVTRFTLPIRAIAFNKSGSMLGAAGDDEGI 499
           A+SPNSTCLAS SIDHSVKLY+FPGGEFQTNVTRFTLPIR I+FN+SGS+L AAGDDEGI
Sbjct: 68  ALSPNSTCLASGSIDHSVKLYKFPGGEFQTNVTRFTLPIRVISFNRSGSILAAAGDDEGI 127

Query: 498 KLINTIDGSIARVLKGHSASVTSLAF 421
           KLINTIDGSIARVLKGH  SVT LAF
Sbjct: 128 KLINTIDGSIARVLKGHKGSVTGLAF 153


>ref|XP_002517706.1| WD-repeat protein, putative [Ricinus communis]
           gi|223543104|gb|EEF44638.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 775

 Score =  216 bits (551), Expect(2) = 7e-93
 Identities = 99/130 (76%), Positives = 118/130 (90%)
 Frame = -1

Query: 392 PIGEYLSSVDSFGTVVFWELCTGKVLYTLKGVAPDSGSDTSVSAVLSWSPDGDVLAVPGL 213
           P GEYL+SVDS GTV+FWEL +G VL+TLK VAP +GSDTSV  V+SWSPDG+ LAVPGL
Sbjct: 157 PNGEYLASVDSTGTVIFWELQSGTVLHTLKAVAPHTGSDTSVMNVVSWSPDGETLAVPGL 216

Query: 212 KGDVVMYDRDTAEKLFSLKGEHDKSVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDR 33
           + DVVMYDRDTAEKLFSL+G+H + +CF+SWSPNG+Y+ATSGLD+Q+LIWDVD++QDIDR
Sbjct: 217 RNDVVMYDRDTAEKLFSLRGDHVQPICFLSWSPNGRYMATSGLDKQILIWDVDKKQDIDR 276

Query: 32  QKFDDRISCM 3
           QKFDDRISCM
Sbjct: 277 QKFDDRISCM 286



 Score =  150 bits (379), Expect(2) = 7e-93
 Identities = 72/86 (83%), Positives = 79/86 (91%)
 Frame = -3

Query: 678 AISPNSTCLASASIDHSVKLYRFPGGEFQTNVTRFTLPIRAIAFNKSGSMLGAAGDDEGI 499
           ++SPNSTCLAS SIDHSVKLY+FPGGEF++N+TRFTLPIR +AFNKSGSML AAGDDEGI
Sbjct: 70  SLSPNSTCLASGSIDHSVKLYKFPGGEFESNITRFTLPIRVLAFNKSGSMLAAAGDDEGI 129

Query: 498 KLINTIDGSIARVLKGHSASVTSLAF 421
           KLINTIDGSIARVLKGH   VT LAF
Sbjct: 130 KLINTIDGSIARVLKGHKEPVTGLAF 155


>ref|XP_003527122.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Glycine max]
          Length = 972

 Score =  204 bits (519), Expect(2) = 1e-88
 Identities = 90/130 (69%), Positives = 112/130 (86%)
 Frame = -1

Query: 392 PIGEYLSSVDSFGTVVFWELCTGKVLYTLKGVAPDSGSDTSVSAVLSWSPDGDVLAVPGL 213
           P GEYL+S+DS GTV+ WEL +GK+++ LKG+APD+G D S   VL WSPDG+ LAVPGL
Sbjct: 156 PNGEYLASLDSTGTVILWELQSGKIIHNLKGIAPDTGLDVSTMNVLCWSPDGETLAVPGL 215

Query: 212 KGDVVMYDRDTAEKLFSLKGEHDKSVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDR 33
           K DVVMYDRDTAEK+ SL+G+H + +CF+ WSPNGKY+A+SGLDRQVLIWDVD++QDIDR
Sbjct: 216 KNDVVMYDRDTAEKVLSLRGDHIQPICFLCWSPNGKYIASSGLDRQVLIWDVDRKQDIDR 275

Query: 32  QKFDDRISCM 3
           QKFD+R+ CM
Sbjct: 276 QKFDERVCCM 285



 Score =  149 bits (375), Expect(2) = 1e-88
 Identities = 69/86 (80%), Positives = 79/86 (91%)
 Frame = -3

Query: 678 AISPNSTCLASASIDHSVKLYRFPGGEFQTNVTRFTLPIRAIAFNKSGSMLGAAGDDEGI 499
           A+SPNSTCLAS S+DHSVKLY++PGGEF+ N+TRFTLPIR++AFNKSGSML AAGDDEGI
Sbjct: 69  ALSPNSTCLASGSVDHSVKLYKYPGGEFERNITRFTLPIRSLAFNKSGSMLAAAGDDEGI 128

Query: 498 KLINTIDGSIARVLKGHSASVTSLAF 421
           KLINT DG+IARVLKGH  S+T LAF
Sbjct: 129 KLINTFDGTIARVLKGHKGSITGLAF 154


>ref|XP_003595690.1| WD repeat-containing protein [Medicago truncatula]
           gi|355484738|gb|AES65941.1| WD repeat-containing protein
           [Medicago truncatula]
          Length = 991

 Score =  200 bits (509), Expect(2) = 2e-88
 Identities = 88/130 (67%), Positives = 110/130 (84%)
 Frame = -1

Query: 392 PIGEYLSSVDSFGTVVFWELCTGKVLYTLKGVAPDSGSDTSVSAVLSWSPDGDVLAVPGL 213
           P GEYL+S+DS GTV+ WEL +GK L+ LKG+APD+G D     VL WSPDG+ LA+PGL
Sbjct: 156 PNGEYLASLDSIGTVIIWELHSGKNLHNLKGIAPDTGLDLLTMNVLCWSPDGETLAIPGL 215

Query: 212 KGDVVMYDRDTAEKLFSLKGEHDKSVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDR 33
           K DVVMYDRDTAEKLF+L+G+H + +CF+ WSPNGKY+ATS LD+Q+LIWDVD++QDIDR
Sbjct: 216 KNDVVMYDRDTAEKLFTLRGDHTQPICFLCWSPNGKYMATSSLDKQILIWDVDKKQDIDR 275

Query: 32  QKFDDRISCM 3
           QKFD+R+ CM
Sbjct: 276 QKFDERVCCM 285



 Score =  151 bits (382), Expect(2) = 2e-88
 Identities = 71/86 (82%), Positives = 79/86 (91%)
 Frame = -3

Query: 678 AISPNSTCLASASIDHSVKLYRFPGGEFQTNVTRFTLPIRAIAFNKSGSMLGAAGDDEGI 499
           A+SPNSTCLAS S+DHSVKLY+FPGGEF+TN+TRFTLPIR++AFNK GSML AAGDDEGI
Sbjct: 69  ALSPNSTCLASGSVDHSVKLYKFPGGEFETNITRFTLPIRSLAFNKKGSMLAAAGDDEGI 128

Query: 498 KLINTIDGSIARVLKGHSASVTSLAF 421
           KLINT+DGSIARVLKGH   VT LAF
Sbjct: 129 KLINTVDGSIARVLKGHKGPVTGLAF 154


>ref|XP_004138211.1| PREDICTED: WD repeat and HMG-box DNA-binding protein 1-like
           [Cucumis sativus] gi|449477125|ref|XP_004154937.1|
           PREDICTED: WD repeat and HMG-box DNA-binding protein
           1-like [Cucumis sativus]
          Length = 962

 Score =  206 bits (524), Expect(2) = 1e-87
 Identities = 92/130 (70%), Positives = 112/130 (86%)
 Frame = -1

Query: 392 PIGEYLSSVDSFGTVVFWELCTGKVLYTLKGVAPDSGSDTSVSAVLSWSPDGDVLAVPGL 213
           P  EYL+SVDS GTV+ WEL +G +++ LKG+AP++GSD SV  VL WSPDG+ LAVPGL
Sbjct: 157 PNSEYLASVDSIGTVIIWELQSGSIIHNLKGIAPNTGSDPSVMNVLGWSPDGETLAVPGL 216

Query: 212 KGDVVMYDRDTAEKLFSLKGEHDKSVCFVSWSPNGKYVATSGLDRQVLIWDVDQRQDIDR 33
           + DVVMYDRDTAEKLFSL+G+H + +CF+SWSPNGKY+ATS LDRQ+LIWDVDQ+ DIDR
Sbjct: 217 RNDVVMYDRDTAEKLFSLRGDHTQPICFLSWSPNGKYMATSSLDRQILIWDVDQKLDIDR 276

Query: 32  QKFDDRISCM 3
           QKFD+RI CM
Sbjct: 277 QKFDERICCM 286



 Score =  143 bits (361), Expect(2) = 1e-87
 Identities = 66/86 (76%), Positives = 77/86 (89%)
 Frame = -3

Query: 678 AISPNSTCLASASIDHSVKLYRFPGGEFQTNVTRFTLPIRAIAFNKSGSMLGAAGDDEGI 499
           A+SPNSTCLAS S+D SVKLY+FPGGEF+TN+TRFTLPIR + FNKSGS+L A GDD+GI
Sbjct: 70  ALSPNSTCLASGSMDRSVKLYKFPGGEFETNITRFTLPIRILGFNKSGSLLAAGGDDDGI 129

Query: 498 KLINTIDGSIARVLKGHSASVTSLAF 421
           KL+NT+DGSIARVLKGH  +VT LAF
Sbjct: 130 KLVNTVDGSIARVLKGHKGAVTGLAF 155