BLASTX nr result

ID: Coptis25_contig00022686 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022686
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|1...   289   8e-76
emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]   287   4e-75
ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosy...   283   4e-74
ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-...   273   7e-71
ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp....   259   1e-66

>ref|XP_002303863.1| predicted protein [Populus trichocarpa] gi|118482072|gb|ABK92967.1|
           unknown [Populus trichocarpa]
           gi|222841295|gb|EEE78842.1| predicted protein [Populus
           trichocarpa]
          Length = 230

 Score =  289 bits (740), Expect = 8e-76
 Identities = 138/210 (65%), Positives = 161/210 (76%), Gaps = 6/210 (2%)
 Frame = +3

Query: 63  SRDITVSTAFL------LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSL 224
           S+ I+   AFL      L L  S +VAHN YSINL+SHP  TL LI +V++ I IL++S 
Sbjct: 17  SKSISAPQAFLIHLISGLGLAISLWVAHNFYSINLVSHPSITLRLIWIVESAIVILIYSR 76

Query: 225 LRQNPQQCSYWKAVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFV 404
            R +PQQCSY KAV+RG+L LP+GA + A GAI LGAP+GIQYL KTI WSLLMS FT  
Sbjct: 77  FRIDPQQCSYLKAVVRGILALPVGALVNALGAIALGAPVGIQYLPKTINWSLLMSSFTVA 136

Query: 405 PAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGAWPMPLDWERPWQEWP 584
           PAASV+GSSW  WQR+FA TKP   LEY+ICIPAHGA+IG W GAWPMPLDWERPWQEWP
Sbjct: 137 PAASVFGSSWTYWQRIFAQTKPNEPLEYMICIPAHGAVIGGWFGAWPMPLDWERPWQEWP 196

Query: 585 ICVSYGAVAGYTVGMVVSMGFVLVLGKRQR 674
           ICV+YGA+ GY VGM+ S GFVL  G+RQR
Sbjct: 197 ICVTYGAMTGYLVGMLASSGFVLANGRRQR 226


>emb|CAN81085.1| hypothetical protein VITISV_028128 [Vitis vinifera]
          Length = 246

 Score =  287 bits (734), Expect = 4e-75
 Identities = 126/187 (67%), Positives = 157/187 (83%)
 Frame = +3

Query: 96  LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 275
           L L  SF+  H+ +S NLIS P+ TL LI + +TPI +L++S  R+NP++CSYW+AV RG
Sbjct: 50  LGLALSFWATHSFFSTNLISDPVHTLLLIWVFETPIVVLVYSRFRKNPKECSYWRAVGRG 109

Query: 276 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 455
           +LG+P+GA +  FGAI LGAP+GIQYL +TI WSLLMS+ TFVPAA V+GSSW DWQR+F
Sbjct: 110 LLGIPLGALINIFGAIALGAPVGIQYLLRTINWSLLMSLLTFVPAACVFGSSWTDWQRVF 169

Query: 456 ANTKPTGSLEYIICIPAHGAIIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 635
           A+TKP G+++Y+IC+PAHGAIIGAWLGAWPMPLDWERPWQEWP+CVSYGA+AGY V MV 
Sbjct: 170 AHTKPIGAIDYMICLPAHGAIIGAWLGAWPMPLDWERPWQEWPVCVSYGAMAGYLVAMVA 229

Query: 636 SMGFVLV 656
           S+GF LV
Sbjct: 230 SLGFTLV 236


>ref|XP_003632919.1| PREDICTED: phosphatidylinositol-glycan biosynthesis class F
           protein-like [Vitis vinifera]
           gi|298204771|emb|CBI25269.3| unnamed protein product
           [Vitis vinifera]
          Length = 245

 Score =  283 bits (725), Expect = 4e-74
 Identities = 125/187 (66%), Positives = 155/187 (82%)
 Frame = +3

Query: 96  LSLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITILLFSLLRQNPQQCSYWKAVLRG 275
           L L  SF+  H+ +S NLIS P+ TL L  + +TPI +L++S  R+NP++CSYW+AV RG
Sbjct: 49  LGLALSFWATHSFFSTNLISDPVHTLLLTWVFETPIVVLVYSRFRKNPKECSYWRAVGRG 108

Query: 276 VLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMSVFTFVPAASVYGSSWKDWQRLF 455
           +LG+P+GA +  FGAI LGAP+GIQYL  TI WSLLMS+ TFVPAA V+GSSW DWQR+F
Sbjct: 109 LLGIPLGALINIFGAIALGAPVGIQYLLGTINWSLLMSLLTFVPAACVFGSSWTDWQRVF 168

Query: 456 ANTKPTGSLEYIICIPAHGAIIGAWLGAWPMPLDWERPWQEWPICVSYGAVAGYTVGMVV 635
           A+TKP G+++Y+IC+PAHGAIIGAWLGAWPMPLDWERPWQEWP+CVSYGA+AGY V MV 
Sbjct: 169 AHTKPIGAIDYMICLPAHGAIIGAWLGAWPMPLDWERPWQEWPVCVSYGAMAGYLVAMVA 228

Query: 636 SMGFVLV 656
           S+GF LV
Sbjct: 229 SLGFTLV 235


>ref|XP_004137648.1| PREDICTED: uncharacterized protein C1450.15-like [Cucumis sativus]
           gi|449501593|ref|XP_004161410.1| PREDICTED:
           uncharacterized protein C1450.15-like [Cucumis sativus]
          Length = 225

 Score =  273 bits (697), Expect = 7e-71
 Identities = 133/220 (60%), Positives = 167/220 (75%), Gaps = 6/220 (2%)
 Frame = +3

Query: 48  MASSNSRDITVSTAFLL------SLTTSFYVAHNIYSINLISHPIPTLALISLVQTPITI 209
           MAS++S  I++  AF L      +L  +F++AH I+S +LIS P  TL LI +VQ+PI I
Sbjct: 8   MASTSSTPISIPEAFFLHLISALALALAFWIAHYIFSTHLISDPSLTLFLILVVQSPIVI 67

Query: 210 LLFSLLRQNPQQCSYWKAVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIYWSLLMS 389
           LL+S  R +  QCSY+KAV RG+LGLP GA + AFGAIVLGAPIG QY  KT+ WSL+MS
Sbjct: 68  LLYSRYRTDRHQCSYFKAVARGLLGLPAGAIINAFGAIVLGAPIGAQYFLKTLNWSLVMS 127

Query: 390 VFTFVPAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGAWPMPLDWERP 569
           +F  VP+A V+GSSW DWQRLFA TKP G+++++ICIPAHGAIIGAW GAWPMPLDWERP
Sbjct: 128 LFNIVPSACVFGSSWIDWQRLFAYTKPIGTIDHMICIPAHGAIIGAWFGAWPMPLDWERP 187

Query: 570 WQEWPICVSYGAVAGYTVGMVVSMGFVLVLGKRQRHVKND 689
           WQEWPICV+YGA+ GY++ M  S+  VL   +  +HVK D
Sbjct: 188 WQEWPICVTYGAILGYSIAMAASL--VLSHQRGLQHVKRD 225


>ref|XP_002890143.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297335985|gb|EFH66402.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 228

 Score =  259 bits (661), Expect = 1e-66
 Identities = 120/220 (54%), Positives = 163/220 (74%)
 Frame = +3

Query: 12  TPSISFHTQSSIMASSNSRDITVSTAFLLSLTTSFYVAHNIYSINLISHPIPTLALISLV 191
           TP IS     S + + +   IT      L L   F+V HNIY ++LIS P  TL L+ ++
Sbjct: 9   TPEISIGVSISALGAFSVYLITG-----LFLAVGFWVIHNIYFVDLISDPSLTLRLLWII 63

Query: 192 QTPITILLFSLLRQNPQQCSYWKAVLRGVLGLPIGAFLMAFGAIVLGAPIGIQYLEKTIY 371
           + PI ++++SLLR+NP++CSY++AV R ++GL  GA + AFGA+ LGAPIG+Q L +TI+
Sbjct: 64  EFPIVVIIYSLLRRNPEKCSYFRAVGRSIVGLISGALINAFGAVSLGAPIGMQSLPRTIH 123

Query: 372 WSLLMSVFTFVPAASVYGSSWKDWQRLFANTKPTGSLEYIICIPAHGAIIGAWLGAWPMP 551
           WS LMSVFT VPA +V+G+SW DW R+FA+ KPTG++EY+I IPA+GAIIGAW GAWPMP
Sbjct: 124 WSFLMSVFTVVPATAVFGASWTDWHRVFASLKPTGNIEYMILIPAYGAIIGAWFGAWPMP 183

Query: 552 LDWERPWQEWPICVSYGAVAGYTVGMVVSMGFVLVLGKRQ 671
           LDWERPWQEWP+CV YGA+ G  VG +VS+  +++L K +
Sbjct: 184 LDWERPWQEWPVCVCYGAIGGCIVGQIVSLSLMILLRKHK 223


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