BLASTX nr result

ID: Coptis25_contig00022678 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022678
         (707 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putativ...    58   2e-06

>ref|XP_002529385.1| Cyclic nucleotide-gated ion channel, putative [Ricinus communis]
           gi|223531133|gb|EEF32981.1| Cyclic nucleotide-gated ion
           channel, putative [Ricinus communis]
          Length = 735

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 27/63 (42%), Positives = 39/63 (61%)
 Frame = -3

Query: 636 FFFFHLYIDPTNYLDFNNNLEIITSTVRIIDDAFYVIRTICQFHIYYVASAYEVFSEGEL 457
           FF+  ++ DP + L  +  L II +T+R + DAFY+IR   QF   Y+A +  VF  GEL
Sbjct: 129 FFYLPVFNDPAHCLGIDRKLAIIATTLRTVIDAFYLIRMALQFRTAYIAPSSRVFGRGEL 188

Query: 456 VMD 448
           V+D
Sbjct: 189 VID 191


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