BLASTX nr result

ID: Coptis25_contig00022645 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022645
         (816 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAG75107.1| transcription factor MYB251 [Fagus crenata]           202   7e-50
emb|CAN78909.1| hypothetical protein VITISV_038222 [Vitis vinifera]   194   3e-47
ref|XP_002279854.2| PREDICTED: LOW QUALITY PROTEIN: transcriptio...   192   1e-46
emb|CBI20713.3| unnamed protein product [Vitis vinifera]              192   1e-46
gb|ACR83705.1| MYB transcription factor R2R3-like protein [Popul...   191   2e-46

>dbj|BAG75107.1| transcription factor MYB251 [Fagus crenata]
          Length = 299

 Score =  202 bits (514), Expect = 7e-50
 Identities = 119/282 (42%), Positives = 152/282 (53%), Gaps = 12/282 (4%)
 Frame = -2

Query: 815 AWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNYLNPKIKRGNITEEEE 636
           AWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNYL P IKRGNI+ +EE
Sbjct: 17  AWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEE 76

Query: 635 DLIARLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTILQRKIEGQSSPPK------RKSRN 474
           +LI RLH LLGNRWSLIAGRLPGRTDNE+KNYWNT L++K + +SS P+       KSR 
Sbjct: 77  ELIIRLHNLLGNRWSLIAGRLPGRTDNEVKNYWNTTLRKKAKAESSSPRAEQSSQSKSRE 136

Query: 473 KAKVKISSTTLPRXXXXXXXXXXXXXXXNVT-CTEDIVATIPLNNNEENIRETSSHSHSD 297
           K       T  P                  T CT+ ++  IP  N  ++   T+  +   
Sbjct: 137 KKMATEPVTAEPSNSAQAAATPPQVIRTKATRCTKVLIPAIPSPNEHQSFISTA--TDPV 194

Query: 296 DVQNHQNNFSTECLDEWLTDTGSGEQYSYSMDKYFMFLLNDDVQLGK-----NANWEEVT 132
           D Q  ++       D  +         + + D  F     ++ Q G      + N++ V 
Sbjct: 195 DPQTLESQLPNYHQDSEVRHGTKEVHKTSAQDSDFFNFSCNEFQAGHEDADGDNNFKNVG 254

Query: 131 YHDISSGDGLDEPTLGYWRGNDYFERTESLDLGSLATLFETQ 6
            HD       DE     W  N   E   +LD+ SL  L +++
Sbjct: 255 LHDPDQSLTFDETMFKDWTTNCCLEDNFNLDIDSLTILLDSE 296


>emb|CAN78909.1| hypothetical protein VITISV_038222 [Vitis vinifera]
          Length = 265

 Score =  194 bits (492), Expect = 3e-47
 Identities = 123/281 (43%), Positives = 148/281 (52%), Gaps = 11/281 (3%)
 Frame = -2

Query: 815 AWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNYLNPKIKRGNITEEEE 636
           AWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNYL P IKRGNI+ +EE
Sbjct: 16  AWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEE 75

Query: 635 DLIARLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTILQRKIEGQSSPPKRKSRNKAKVKI 456
           +LI RLHKLLGNRWSLIAGRLPGRTDNEIKNYWNT L +KI  Q   P  +SR K+K  I
Sbjct: 76  ELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKIGAQ---PTNQSRLKSKPPI 132

Query: 455 SSTTLPRXXXXXXXXXXXXXXXNVTCTEDIVATIPLNN-NEENIRETSSHSHSDDVQNHQ 279
                                    CT+ +V T P    +E    ++++  +    Q  Q
Sbjct: 133 DHKPTTIEPEAAPAQPQVIRTKATRCTKVLVPTDPPPRLSEPRPIDSTTPQNPLQAQPQQ 192

Query: 278 NNF-----STECLDEWLTDTGS---GEQYSYS--MDKYFMFLLNDDVQLGKNANWEEVTY 129
            +      ST+   ++ T T S    E YSYS  ++    F   D               
Sbjct: 193 THSVAPWGSTDFTPDYGTITNSNLFNEDYSYSNLLENVTPFKFED--------------- 237

Query: 128 HDISSGDGLDEPTLGYWRGNDYFERTESLDLGSLATLFETQ 6
                           W  ND  E   +LDL SLA L  ++
Sbjct: 238 ----------------WASNDCLENNATLDLDSLAFLLNSE 262


>ref|XP_002279854.2| PREDICTED: LOW QUALITY PROTEIN: transcription repressor MYB4 [Vitis
           vinifera]
          Length = 265

 Score =  192 bits (487), Expect = 1e-46
 Identities = 123/281 (43%), Positives = 145/281 (51%), Gaps = 11/281 (3%)
 Frame = -2

Query: 815 AWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNYLNPKIKRGNITEEEE 636
           AWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNYL P IKRGNI+ +EE
Sbjct: 16  AWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEE 75

Query: 635 DLIARLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTILQRKIEGQSSPPKRKSRNKAKVKI 456
           +LI RLHKLLGNRWSLIAGRLPGRTDNEIKNYWNT L +KI  Q   P  +SR K+K  I
Sbjct: 76  ELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKIGAQ---PTNQSRLKSKPPI 132

Query: 455 SSTTLPRXXXXXXXXXXXXXXXNVTCTEDIVATIP---LNNNEENIRETSSHSHSDDVQN 285
                                    CT+ +V T P   L+        T + S S     
Sbjct: 133 DHKPTAIEPEAAPAQPQVIRTKATRCTKVLVPTDPPPRLSEPRPIDSTTXTKSSSGSAST 192

Query: 284 HQNNF---STECLDEWLTDTGS---GEQYSYS--MDKYFMFLLNDDVQLGKNANWEEVTY 129
           + +      T+   ++ T T S    E YSYS  ++    F   D               
Sbjct: 193 NPSVAPWGPTDFTPDYGTITNSNLFNEDYSYSNLLENVTPFKFED--------------- 237

Query: 128 HDISSGDGLDEPTLGYWRGNDYFERTESLDLGSLATLFETQ 6
                           W  ND  E   +LDL SLA L  ++
Sbjct: 238 ----------------WASNDCLENNAALDLDSLAFLLNSE 262


>emb|CBI20713.3| unnamed protein product [Vitis vinifera]
          Length = 265

 Score =  192 bits (487), Expect = 1e-46
 Identities = 122/281 (43%), Positives = 147/281 (52%), Gaps = 11/281 (3%)
 Frame = -2

Query: 815 AWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNYLNPKIKRGNITEEEE 636
           AWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNYL P IKRGNI+ +EE
Sbjct: 16  AWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISHDEE 75

Query: 635 DLIARLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTILQRKIEGQSSPPKRKSRNKAKVKI 456
           +LI RLHKLLGNRWSLIAGRLPGRTDNEIKNYWNT L +KI  Q   P  +SR K+K  I
Sbjct: 76  ELIIRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKIGAQ---PTNQSRLKSKPPI 132

Query: 455 SSTTLPRXXXXXXXXXXXXXXXNVTCTEDIVATIPLNN-NEENIRETSSHSHSDDVQNHQ 279
                                    CT+ +V T P    +E    ++++  +    Q  Q
Sbjct: 133 DHKPTAIEPEAAPAQPQVIRTKATRCTKVLVPTDPPPRLSEPRPIDSTTPQNPLQAQPQQ 192

Query: 278 NNF-----STECLDEWLTDTGS---GEQYSYS--MDKYFMFLLNDDVQLGKNANWEEVTY 129
            +       T+   ++ T T S    E YSYS  ++    F   D               
Sbjct: 193 THSVAPWGPTDFTPDYGTITNSNLFNEDYSYSNLLENVTPFKFED--------------- 237

Query: 128 HDISSGDGLDEPTLGYWRGNDYFERTESLDLGSLATLFETQ 6
                           W  ND  E   +LDL SLA L  ++
Sbjct: 238 ----------------WASNDCLENNAALDLDSLAFLLNSE 262


>gb|ACR83705.1| MYB transcription factor R2R3-like protein [Populus tremuloides]
          Length = 289

 Score =  191 bits (484), Expect = 2e-46
 Identities = 117/275 (42%), Positives = 148/275 (53%), Gaps = 5/275 (1%)
 Frame = -2

Query: 815 AWTTLEDHILTNYILANGEGKWRDLPKRAGLKRCGKSCRLRWLNYLNPKIKRGNITEEEE 636
           AWT LED ILT YI A+GEGKWR+LPKRAGLKRCGKSCRLRWLNYL P IKRGNI+ +EE
Sbjct: 16  AWTALEDKILTAYIKAHGEGKWRNLPKRAGLKRCGKSCRLRWLNYLRPDIKRGNISNDEE 75

Query: 635 DLIARLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTILQRKIEGQSSPPKRKSRNKAKVKI 456
           +LI RLHKLLGNRWSLIAGRLPGRTDNEIKNYWNT L +K   Q+SP  +++    K + 
Sbjct: 76  ELIVRLHKLLGNRWSLIAGRLPGRTDNEIKNYWNTTLGKKATAQASPQSKQNSQSFKKRA 135

Query: 455 SSTTLPRXXXXXXXXXXXXXXXNVTCTEDIVATIPLNNNEENIRETSSHSHSDDVQ---- 288
                                    CT+  ++           +  SS +  D  Q    
Sbjct: 136 IEPMTNTQSSKSTLATQVIPTKATRCTKVFLSLQSPPPPIPPPKTLSSTAIDDPPQAPLL 195

Query: 287 NHQNNF-STECLDEWLTDTGSGEQYSYSMDKYFMFLLNDDVQLGKNANWEEVTYHDISSG 111
           NHQ +  +  C D+       G    +        + ND     KN + +  +YH ++  
Sbjct: 196 NHQQDSPNLHCRDDDSDFLNFGHWNEFQPSDGGTLIDND---CDKNLSID--SYHSLAVS 250

Query: 110 DGLDEPTLGYWRGNDYFERTESLDLGSLATLFETQ 6
           D L       W  N   +   +LDL SLA L +++
Sbjct: 251 DDL---MFKDWALNRCLDDNSTLDLESLAHLLDSE 282


Top