BLASTX nr result

ID: Coptis25_contig00022639 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022639
         (766 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|2...    73   6e-11
ref|XP_002539968.1| conserved hypothetical protein [Ricinus comm...    72   1e-10
ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|2...    71   2e-10
ref|XP_003551789.1| PREDICTED: uncharacterized protein LOC100781...    70   4e-10
ref|XP_002539784.1| conserved hypothetical protein [Ricinus comm...    69   1e-09

>ref|XP_002305308.1| predicted protein [Populus trichocarpa] gi|222848272|gb|EEE85819.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 73.2 bits (178), Expect = 6e-11
 Identities = 46/104 (44%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
 Frame = +1

Query: 49  PSSHSTNDKYHLW----NTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTSSES--EDI 210
           P+S+ST    H      N+PIPYLF  LA M            C++RKSS++S S  E  
Sbjct: 3   PASNSTTPAVHAGYQDRNSPIPYLFASLALMLALIALSLIILACSYRKSSSNSSSDPEAR 62

Query: 211 EKAPNLSLPPAEMEPKIVVIMAGDHMPTFLANPASAGEHNLQEV 342
           EK+       AEMEPKIVVIMAGD  PT+LA P S    + ++V
Sbjct: 63  EKSGKQGEMRAEMEPKIVVIMAGDDNPTYLAEPVSCNCQSDEQV 106


>ref|XP_002539968.1| conserved hypothetical protein [Ricinus communis]
           gi|223500659|gb|EEF22415.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 118

 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 42/96 (43%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
 Frame = +1

Query: 52  SSHSTNDKYHLWNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTSSES--EDIEKAPN 225
           S+ S N  +  WN+P+PYLFGGLA M            C+++ SS S+ S   D + A  
Sbjct: 11  SAPSVNGGFQHWNSPVPYLFGGLALMLGLIAMALMILACSYKNSSPSNNSSPRDHQAAEE 70

Query: 226 LSLP-------PAEMEPKIVVIMAGDHMPTFLANPA 312
            S           EMEPKIVVIMAGDH PT+ A PA
Sbjct: 71  KSRHDHKRAELQMEMEPKIVVIMAGDHNPTYFAKPA 106


>ref|XP_002329306.1| predicted protein [Populus trichocarpa] gi|222870760|gb|EEF07891.1|
           predicted protein [Populus trichocarpa]
          Length = 106

 Score = 71.2 bits (173), Expect = 2e-10
 Identities = 44/104 (42%), Positives = 58/104 (55%), Gaps = 6/104 (5%)
 Frame = +1

Query: 49  PSSHSTNDKYHLW----NTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTSS--ESEDI 210
           P+ +ST    H      N+PIPYLF  +  M            C++RKSS++S  + E  
Sbjct: 3   PAFNSTAPAVHAGYQDRNSPIPYLFSSIGLMFGLVAVALMILACSYRKSSSTSATDPEVQ 62

Query: 211 EKAPNLSLPPAEMEPKIVVIMAGDHMPTFLANPASAGEHNLQEV 342
           EK+ N     AEMEPKIVVIMAGD  PT+LANP S    + ++V
Sbjct: 63  EKSANQVEMKAEMEPKIVVIMAGDDRPTYLANPVSCNCQSDEQV 106


>ref|XP_003551789.1| PREDICTED: uncharacterized protein LOC100781671 [Glycine max]
          Length = 123

 Score = 70.5 bits (171), Expect = 4e-10
 Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
 Frame = +1

Query: 49  PSSHSTNDKYHLWNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRK---SSTSSESEDIEKA 219
           PSS       ++W +PIPYLFGGLA M            C++RK    S+S  +ED++  
Sbjct: 9   PSSPMRASGVNIWKSPIPYLFGGLAVMLAIISMALVILVCSYRKRDSQSSSEVNEDVKSQ 68

Query: 220 PNLSLPPAEMEPKIVVIMAGDHMPTFLANPASA 318
              +      EP+++VIMAGDH PT+LA P ++
Sbjct: 69  AMANNLETNSEPEVLVIMAGDHNPTYLAKPITS 101


>ref|XP_002539784.1| conserved hypothetical protein [Ricinus communis]
           gi|223502421|gb|EEF22599.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 125

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 37/80 (46%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
 Frame = +1

Query: 85  WNTPIPYLFGGLAAMXXXXXXXXXXXXCTHRKSSTSSESEDIEKAPNLSLPPAEM----- 249
           W++PIPYLFGGLA M            C++RKS  + ES D +          E+     
Sbjct: 21  WSSPIPYLFGGLAVMLAFVTVSLIILACSYRKSLFNHESRDDDHEDKTGAKKVEVMVDSD 80

Query: 250 EPKIVVIMAGDHMPTFLANP 309
           EPKIVVIMAGD+ PTFLA P
Sbjct: 81  EPKIVVIMAGDNNPTFLAKP 100


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