BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022634
         (1892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helica...   583   e-164
ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA h...   502   e-139
ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|2...   497   e-138
ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP...   493   e-137
ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helica...   493   e-137

>ref|XP_002268905.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Vitis
            vinifera]
          Length = 1414

 Score =  583 bits (1502), Expect = e-164
 Identities = 335/590 (56%), Positives = 415/590 (70%), Gaps = 6/590 (1%)
 Frame = -2

Query: 1858 STKNDDSNAFVLPGXXXXXXXXXKQDNLK----KKAALSNSEKRXXXXXXXXXXXXXXQS 1691
            S+K DDSNA +LP          KQ++ K    K   LS S+KR               S
Sbjct: 97   SSKGDDSNAIILPEKKGKKRKGMKQEHEKFKTNKTRKLSASQKRKLKKLEEEKEKSLLLS 156

Query: 1690 ESIKTLQKYQIREDAYSLLKSSGNIGQVETKREKRERAAQFSKIGLDVPNDDQPSKKRRK 1511
            +SI+TL+KY+IREDA+SLL+SS N+GQVET  EKR RA +FSK GL++P+ D+P K +  
Sbjct: 157  KSIETLEKYKIREDAFSLLQSSQNLGQVETTLEKRRRAVRFSKAGLEMPHSDRPFKSQ-- 214

Query: 1510 DGDFCETESDVDKGQWKLE-DRPNNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSE 1334
            DG   E E D +K Q K E D  + +   ++  E L NA +S      ++CS  L  NS 
Sbjct: 215  DG---EMEPDSNKIQSKQEFDESDAMWPRMVQREVLSNASISLGFTSELVCSTELAVNSR 271

Query: 1333 -SATSSAKECFVINSKSMQDDKKKPSLIHCNYKRRESTEPKDVELVSAKADCNNSSIHVD 1157
             S T  AKE    N  +   D++  +        +++ + KDV   +   +   +S   D
Sbjct: 272  HSPTLPAKEVSEKNYDTSMQDRRNSTPTSTTADGQKNIKSKDVPDWNLNLNFRGTSNLPD 331

Query: 1156 NAVQRPVISPTVVHVSRPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQ 977
             ++Q P+ +PTVVHVSRP EVE NRKDLP         EAIN+ + VIICGETGCGKTTQ
Sbjct: 332  CSLQ-PITTPTVVHVSRPTEVENNRKDLPIVMMEQEIMEAINDHTAVIICGETGCGKTTQ 390

Query: 976  VPQFLYEAGFGSSKTSVRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRK 797
            VPQFLYEAGFGS + SV+SGIIGVTQPRRVAVLATAKRVAFELGL LGKEVGFQVRHD+ 
Sbjct: 391  VPQFLYEAGFGSKQASVQSGIIGVTQPRRVAVLATAKRVAFELGLSLGKEVGFQVRHDKM 450

Query: 796  IGDNCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRM 617
            IGD+CSIKFMTDGILLREVQ+DF L+RYSVIILDEAHERSLNTDILIGMLSRVIQVRQ++
Sbjct: 451  IGDSCSIKFMTDGILLREVQNDFSLRRYSVIILDEAHERSLNTDILIGMLSRVIQVRQKL 510

Query: 616  YQEQHEKVLSGVYVSPENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPV 437
            Y+EQ + +LSGV +SPE+++  LKLVLMSATLRVEDF+S R+LF  PPPVIEV +RQFPV
Sbjct: 511  YEEQQQMMLSGVRISPESMVPQLKLVLMSATLRVEDFISGRRLFHTPPPVIEVPSRQFPV 570

Query: 436  RLYHTKKTDPNPEEDYLPQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEEL 257
             ++ +K+T+     DY+ QAYKK+++IHK+LP GGILVFVTGQREVEYLC KLRKAS EL
Sbjct: 571  TIHFSKRTE---IVDYIGQAYKKILSIHKKLPQGGILVFVTGQREVEYLCQKLRKASREL 627

Query: 256  SYLSSKRKTENEVTLTSEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFN 107
               SSK+   NEVT  SE NS V G+D+++I+EAFE      +QQ D+F+
Sbjct: 628  MLNSSKQNIGNEVTAVSEMNS-VGGIDIEEINEAFEIQGNSANQQTDRFS 676


>ref|XP_003605075.1| Pre-mRNA-splicing factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula] gi|355506130|gb|AES87272.1| Pre-mRNA-splicing
            factor ATP-dependent RNA helicase PRP16 [Medicago
            truncatula]
          Length = 1331

 Score =  502 bits (1292), Expect = e-139
 Identities = 302/623 (48%), Positives = 393/623 (63%), Gaps = 10/623 (1%)
 Frame = -2

Query: 1843 DSNAFVLPGXXXXXXXXXKQDNLKK--------KAALSNSEKRXXXXXXXXXXXXXXQSE 1688
            DSNA +LP          +Q+  KK        K  LS ++K+                +
Sbjct: 12   DSNALILPTKKMKKRKEMEQERGKKRGKVQSNKKQKLSKTQKKKLKKSEDDKEKQLLLEK 71

Query: 1687 SIKTLQKYQIREDAYSLLKSSGNIGQVETKREKRERAAQFSKIGLDVPNDDQPSKKRRKD 1508
            ++KTL +  + E A+ LL+SS NI +VET +EKR +A    K GLDVP+DD  SKK+   
Sbjct: 72   ALKTLNENTLPEYAFPLLQSSCNINRVETVKEKRRKAVHLLKEGLDVPHDDDLSKKQDIA 131

Query: 1507 GDFCETESDVDKGQWKLEDRPNNVLQLVLGEEDL--DNACLSSDTNQMIICSNILDKNSE 1334
                  E ++   Q K E   N+V+Q    E+++          T + +  + ++  N E
Sbjct: 132  CTSESEEEEIHTVQVK-EFEENDVIQPFRTEKEILYTTTVPLESTQEPVHRNEVI--NYE 188

Query: 1333 SATSSAKECFVINSKSMQDDKKKPSLIHCNYKRRESTEPKDVELVSAKADCNNSSIHVDN 1154
            +      +   +++    D+ +  S    +    +ST  KD +  +   + N  S     
Sbjct: 189  TVAEPVAD---VSTDKQPDEIRSSSPTSRSIDDIKSTNSKDRKNENPTTNFNELSNLPHV 245

Query: 1153 AVQRPVISPTVVHVSRPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQV 974
            + QRP+ +PTVVHV RP EV+E RKDLP         EAIN  S+VI+CGETGCGKTTQV
Sbjct: 246  STQRPLTTPTVVHVYRPPEVQEKRKDLPIVMMEQEIMEAINYNSSVIVCGETGCGKTTQV 305

Query: 973  PQFLYEAGFGSSKTSVRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKI 794
            PQFLYEAG+GSSK   RSGIIGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KI
Sbjct: 306  PQFLYEAGYGSSKFHARSGIIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKI 365

Query: 793  GDNCSIKFMTDGILLREVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMY 614
            G+NCSIKFMTDGILLREVQ+D LL+RYSV+ILDEAHERSLNTDILIGMLSRVI+ RQ++Y
Sbjct: 366  GENCSIKFMTDGILLREVQNDILLRRYSVLILDEAHERSLNTDILIGMLSRVIRTRQKIY 425

Query: 613  QEQHEKVLSGVYVSPENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVR 434
             EQ + VLSG  +SP+ ++ PLKLVLMSATLRV+DF S R LF  PPPVIEV  RQFPV 
Sbjct: 426  DEQQKMVLSGESISPDKMVFPLKLVLMSATLRVQDFTSGR-LFHTPPPVIEVPTRQFPVT 484

Query: 433  LYHTKKTDPNPEEDYLPQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELS 254
            +Y  KKT+     DY+  AYKK++ IHK+LP GGILVFVTGQREVE LC KLRKAS+E  
Sbjct: 485  MYFAKKTEIT---DYVGAAYKKILAIHKKLPSGGILVFVTGQREVEDLCRKLRKASKEFI 541

Query: 253  YLSSKRKTENEVTLTSEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXX 74
                K   EN+  + +E +S V+G+++ +I+EAFE     + QQ D+F+           
Sbjct: 542  MKKVKGSVENDSNVVNETSS-VEGININEINEAFEMPGSSSMQQTDRFSGYDEDDNNFDE 600

Query: 73   XXXXXSPNSGKESDLTINDEDED 5
                   +S  ES+L  ND+D++
Sbjct: 601  NESDSY-DSETESELEFNDDDKN 622


>ref|XP_002302733.1| predicted protein [Populus trichocarpa] gi|222844459|gb|EEE82006.1|
            predicted protein [Populus trichocarpa]
          Length = 1130

 Score =  497 bits (1279), Expect = e-138
 Identities = 290/528 (54%), Positives = 361/528 (68%), Gaps = 2/528 (0%)
 Frame = -2

Query: 1579 AAQFSKIGLDVPNDDQPSKKRRKDGDFCETESDVDKGQWKLEDRPNNVLQ-LVLGEEDLD 1403
            A QFSK GL  P  DQP K+  +   F E E+ +D+ Q K +      LQ +V+G E  +
Sbjct: 2    AVQFSKAGLS-PQGDQPFKRNHETASF-EIEAGLDEIQSKKDMNEKGHLQPMVIGREVQN 59

Query: 1402 NACLSSDTNQMIICSNI-LDKNSESATSSAKECFVINSKSMQDDKKKPSLIHCNYKRRES 1226
            +A  S   +  +  + + L+  S SA S+ +     N     +  KK S    ++  R++
Sbjct: 60   HASFSLVYHDPVSGNELGLNGRSVSAFSAEEVPNEDNCTPTLEVPKKSSQASSDHDARKT 119

Query: 1225 TEPKDVELVSAKADCNNSSIHVDNAVQRPVISPTVVHVSRPNEVEENRKDLPXXXXXXXX 1046
            +        S+  D   +S   D  + RP  +PTVVHVSRP+EVE+ RKDLP        
Sbjct: 120  SSLMGKLNESSTVDLGKASNFPDFPLPRPPTTPTVVHVSRPDEVEKKRKDLPIIMMEQEI 179

Query: 1045 XEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTSVRSGIIGVTQPRRVAVLATAK 866
             EAINE STVIICGETGCGKTTQVPQFLYEAG+GS+ + VR+G+IGVTQPRR+AVLATA+
Sbjct: 180  MEAINEHSTVIICGETGCGKTTQVPQFLYEAGYGSNHSVVRNGVIGVTQPRRIAVLATAR 239

Query: 865  RVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILLREVQSDFLLKRYSVIILDEAH 686
            RVAFELGL LGKEVGFQVRHD++IGDNCSIKFMTDGILLREVQ+D LLKRYSVIILDEAH
Sbjct: 240  RVAFELGLHLGKEVGFQVRHDKRIGDNCSIKFMTDGILLREVQTDILLKRYSVIILDEAH 299

Query: 685  ERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSPENIISPLKLVLMSATLRVEDF 506
            ERS+NTDILIGMLSRVIQ+RQ+ Y++Q + VLSG  +SPEN+I PLKLVLMSATLRVEDF
Sbjct: 300  ERSVNTDILIGMLSRVIQLRQKKYEQQQKLVLSGQSLSPENMIFPLKLVLMSATLRVEDF 359

Query: 505  VSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDYLPQAYKKVITIHKRLPPGGIL 326
            +S+R+LF +PPPVI V  RQF V ++ +K+T+     DY+ QAYKKV++IHKRLP GGIL
Sbjct: 360  ISERRLFHDPPPVINVPTRQFEVTVHFSKRTE---TVDYIGQAYKKVMSIHKRLPQGGIL 416

Query: 325  VFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLTSEKNSIVQGLDMKDISEAFEN 146
            VFVTGQREVEYLC KLRKAS EL   ++K +  +EV   SE  SI +G+DMKDI EAFE 
Sbjct: 417  VFVTGQREVEYLCQKLRKASTELIANTAKGRAGDEVPAMSEMVSI-EGVDMKDIDEAFEI 475

Query: 145  HDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDLTINDEDEDE 2
                  QQ ++F                  P+S  ESD++ +   E E
Sbjct: 476  QGNSIDQQTERFG-----------SHDEGVPDSEDESDVSYDSGSESE 512


>ref|XP_004162448.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
            DHX37-like [Cucumis sativus]
          Length = 1333

 Score =  493 bits (1270), Expect = e-137
 Identities = 305/605 (50%), Positives = 392/605 (64%), Gaps = 17/605 (2%)
 Frame = -2

Query: 1777 LKKKAALSNSEKRXXXXXXXXXXXXXXQSESIKTLQKYQIREDAYSLLKSSGNIGQVETK 1598
            L KK  LS S+KR               S+S++TL+KY+I +DA+ LL+SS NIG+ ET+
Sbjct: 50   LNKKPKLSKSQKRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETR 109

Query: 1597 REKRERAAQFSKIGLDVPNDDQPSKKRRKDGDFCETES---DVDKGQWKL----EDRP-- 1445
             EKR R  QFSK+G++VP +DQ   K   D    E+     D+           ED P  
Sbjct: 110  LEKRSRDIQFSKVGIEVPGNDQQLDKTSSDISQYESHCGSLDISPCHQLSANADEDGPFV 169

Query: 1444 --NNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSESATSSAKE-----CFVINSKS 1286
                V + +   +DLDN  +  +  + +  S++ DK   +     ++     C +     
Sbjct: 170  AEKEVTRGLDSFKDLDNDTIVPNDGKSL--SSLPDKVENTGAVLLEDERDLSCTMCTVGG 227

Query: 1285 MQDDKKKPSLIHCN-YKRRESTEPKDVELVSAKADCNNSSIHVDNAVQRPVISPTVVHVS 1109
             ++ +    ++  N  K +E   PK VE+      C  S++  +    R +  P VV VS
Sbjct: 228  FKEPEIMELIVGLNGLKDKEDGIPK-VEI------CTTSNLLPE---MRLLSKPIVVPVS 277

Query: 1108 RPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTS 929
            RP EVE+ RKDLP         EAINE   VIICGETGCGKTTQVPQFLYEAGFGSS++S
Sbjct: 278  RPCEVEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSS 337

Query: 928  VRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILL 749
             + G IGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KIGD  SIKFMTDGILL
Sbjct: 338  HQRGAIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILL 397

Query: 748  REVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSP 569
            REVQ DFLLKRYSV+ILDEAHERS+NTDILIGMLSRV+++RQ ++ +Q +  LSG  +SP
Sbjct: 398  REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQRQLTLSGGKISP 457

Query: 568  ENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDY 389
            EN+I PLKLVLMSATLRVEDFVS  +LF   PP+IEV  RQFPV ++ +K+TD     DY
Sbjct: 458  ENMIFPLKLVLMSATLRVEDFVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTD---IVDY 514

Query: 388  LPQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLT 209
            + QAYKKV+ IHK+LPPGGILVFVTGQREVE LC KLR+AS++L   +S+R  EN   + 
Sbjct: 515  IGQAYKKVMAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIKKTSERHGENNNGIV 574

Query: 208  SEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDL 29
             E NSI Q LDM +I+EAFE+H+ F+ +Q D+F+                S NS  +S+L
Sbjct: 575  -EMNSI-QNLDMNEINEAFEDHE-FSIEQTDRFSSFDKDEFDINDDVSDASYNSESDSEL 631

Query: 28   TINDE 14
              N++
Sbjct: 632  EFNED 636


>ref|XP_004136163.1| PREDICTED: probable ATP-dependent RNA helicase DHX37-like [Cucumis
            sativus]
          Length = 1333

 Score =  493 bits (1270), Expect = e-137
 Identities = 305/605 (50%), Positives = 392/605 (64%), Gaps = 17/605 (2%)
 Frame = -2

Query: 1777 LKKKAALSNSEKRXXXXXXXXXXXXXXQSESIKTLQKYQIREDAYSLLKSSGNIGQVETK 1598
            L KK  LS S+KR               S+S++TL+KY+I +DA+ LL+SS NIG+ ET+
Sbjct: 50   LNKKPKLSKSQKRKIMKLEEEKEKSLLLSKSLETLEKYKISDDAFLLLRSSVNIGKDETR 109

Query: 1597 REKRERAAQFSKIGLDVPNDDQPSKKRRKDGDFCETES---DVDKGQWKL----EDRP-- 1445
             EKR R  QFSK+G++VP +DQ   K   D    E+     D+           ED P  
Sbjct: 110  LEKRSRDIQFSKVGIEVPGNDQQLDKTSSDISQYESHCGSLDISPCHQLSANADEDGPFV 169

Query: 1444 --NNVLQLVLGEEDLDNACLSSDTNQMIICSNILDKNSESATSSAKE-----CFVINSKS 1286
                V + +   +DLDN  +  +  + +  S++ DK   +     ++     C +     
Sbjct: 170  AEKEVTRGLDSFKDLDNDTIVPNDGKSL--SSLPDKVENTGAVLLEDERDLSCTMCTVGG 227

Query: 1285 MQDDKKKPSLIHCN-YKRRESTEPKDVELVSAKADCNNSSIHVDNAVQRPVISPTVVHVS 1109
             ++ +    ++  N  K +E   PK VE+      C  S++  +    R +  P VV VS
Sbjct: 228  FKEPEIMELIVGLNGLKDKEDGIPK-VEI------CTTSNLLPE---MRLLSKPIVVPVS 277

Query: 1108 RPNEVEENRKDLPXXXXXXXXXEAINECSTVIICGETGCGKTTQVPQFLYEAGFGSSKTS 929
            RP EVE+ RKDLP         EAINE   VIICGETGCGKTTQVPQFLYEAGFGSS++S
Sbjct: 278  RPCEVEDKRKDLPIVMMEQEIMEAINENPIVIICGETGCGKTTQVPQFLYEAGFGSSQSS 337

Query: 928  VRSGIIGVTQPRRVAVLATAKRVAFELGLRLGKEVGFQVRHDRKIGDNCSIKFMTDGILL 749
             + G IGVTQPRRVAVLATAKRVA+ELG+RLGKEVGFQVR+D+KIGD  SIKFMTDGILL
Sbjct: 338  HQRGAIGVTQPRRVAVLATAKRVAYELGVRLGKEVGFQVRYDKKIGDTSSIKFMTDGILL 397

Query: 748  REVQSDFLLKRYSVIILDEAHERSLNTDILIGMLSRVIQVRQRMYQEQHEKVLSGVYVSP 569
            REVQ DFLLKRYSV+ILDEAHERS+NTDILIGMLSRV+++RQ ++ +Q +  LSG  +SP
Sbjct: 398  REVQHDFLLKRYSVLILDEAHERSMNTDILIGMLSRVVKLRQDLHMKQRQLTLSGGKISP 457

Query: 568  ENIISPLKLVLMSATLRVEDFVSQRKLFSEPPPVIEVSARQFPVRLYHTKKTDPNPEEDY 389
            EN+I PLKLVLMSATLRVEDFVS  +LF   PP+IEV  RQFPV ++ +K+TD     DY
Sbjct: 458  ENMIFPLKLVLMSATLRVEDFVSGGRLFHVSPPIIEVPTRQFPVTVHFSKRTD---IVDY 514

Query: 388  LPQAYKKVITIHKRLPPGGILVFVTGQREVEYLCSKLRKASEELSYLSSKRKTENEVTLT 209
            + QAYKKV+ IHK+LPPGGILVFVTGQREVE LC KLR+AS++L   +S+R  EN   + 
Sbjct: 515  IGQAYKKVMAIHKKLPPGGILVFVTGQREVENLCKKLREASKKLIKKTSERHGENNNGIV 574

Query: 208  SEKNSIVQGLDMKDISEAFENHDRFTHQQIDKFNXXXXXXXXXXXXXXXXSPNSGKESDL 29
             E NSI Q LDM +I+EAFE+H+ F+ +Q D+F+                S NS  +S+L
Sbjct: 575  -EMNSI-QNLDMNEINEAFEDHE-FSIEQTDRFSSFDKDEFDINDDVSDASYNSESDSEL 631

Query: 28   TINDE 14
              N++
Sbjct: 632  EFNED 636