BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022629
         (1157 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274814.1| PREDICTED: CDK5RAP1-like protein-like [Vitis...   585   e-165
emb|CAN73510.1| hypothetical protein VITISV_007911 [Vitis vinifera]   560   e-157
emb|CBI17436.3| unnamed protein product [Vitis vinifera]              553   e-155
dbj|BAD15110.2| similar to CDK5 regulatory subunit-associated pr...   549   e-154
ref|XP_002310277.1| predicted protein [Populus trichocarpa] gi|2...   546   e-153

>ref|XP_002274814.1| PREDICTED: CDK5RAP1-like protein-like [Vitis vinifera]
          Length = 626

 Score =  585 bits (1507), Expect = e-165
 Identities = 282/338 (83%), Positives = 302/338 (89%)
 Frame = +1

Query: 142  SHSPFFNKTDVPSLRDFMSKAVSTSETQQVDPVSASEVLSKGRIYHETYGCQMNINDMEI 321
            SH P  NK++VPSL  F+++A   +   Q DPVSASE+L +GRIYHETYGCQMNINDMEI
Sbjct: 70   SHLPLSNKSEVPSLHSFIAQAAVATSEVQPDPVSASEILPRGRIYHETYGCQMNINDMEI 129

Query: 322  VLSIMKNAGYSEVAEVPENAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRRWKSNVAIGR 501
            VLSIMK AGY+EV EVPE+AE+IFINTCAIRDNAEQKVWQRLNYFWFLKR WKSNV+IGR
Sbjct: 130  VLSIMKKAGYNEVVEVPESAEVIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVSIGR 189

Query: 502  SQSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLAEVDYGQKGINTLL 681
            + SLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL EVDYGQKGINTLL
Sbjct: 190  ADSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLL 249

Query: 682  SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVDSIVKEVGEL 861
            SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPV+SIV+EV EL
Sbjct: 250  SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVESIVREVAEL 309

Query: 862  WKEGVKEVMLLGQNVNSYNDDSGIAKDVEPGENWKLSEGFSSKCKVKKVGXXXXXXXXXX 1041
            WKEGVKEVMLLGQNVNSYND SG  K+VEPG NWKLSEGFSSKCKVKK+G          
Sbjct: 310  WKEGVKEVMLLGQNVNSYNDASGFDKEVEPGANWKLSEGFSSKCKVKKMGLRFSDLLDRL 369

Query: 1042 XXEYPEMRFRYTSPHPKDFPTDLLYLMRDRYNICKSIH 1155
              E+PEMRFRYTSPHPKDFP +LLYLMRDRYN+CKSIH
Sbjct: 370  STEFPEMRFRYTSPHPKDFPDELLYLMRDRYNVCKSIH 407


>emb|CAN73510.1| hypothetical protein VITISV_007911 [Vitis vinifera]
          Length = 590

 Score =  560 bits (1443), Expect = e-157
 Identities = 269/309 (87%), Positives = 285/309 (92%)
 Frame = +1

Query: 229  VDPVSASEVLSKGRIYHETYGCQMNINDMEIVLSIMKNAGYSEVAEVPENAEIIFINTCA 408
            ++PVSASE+L +GRIYHETYGCQMNINDMEIVLSIMK AGY+EV EVPE+AE+IFINTCA
Sbjct: 63   LNPVSASEILPRGRIYHETYGCQMNINDMEIVLSIMKKAGYNEVVEVPESAEVIFINTCA 122

Query: 409  IRDNAEQKVWQRLNYFWFLKRRWKSNVAIGRSQSLHPPKVVVLGCMAERLKDKILDADKM 588
            IRDNAEQKVWQRLNYFWFLKR WKSNV+IGR+ SLHPPKVVVLGCMAERLKDKILDADKM
Sbjct: 123  IRDNAEQKVWQRLNYFWFLKRHWKSNVSIGRADSLHPPKVVVLGCMAERLKDKILDADKM 182

Query: 589  VDVVCGPDAYRDLPRLLAEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGC 768
            VDVVCGPDAYRDLPRLL EVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGC
Sbjct: 183  VDVVCGPDAYRDLPRLLEEVDYGQKGINTLLSLEETYADISPVRISKNSVTAFVSIMRGC 242

Query: 769  NNMCSFCIVPFTRGRERSRPVDSIVKEVGELWKEGVKEVMLLGQNVNSYNDDSGIAKDVE 948
            NNMCSFCIVPFTRGRERSRPV+SIV+EV ELWKEGVKEVMLLGQNVNSYND SG  K+VE
Sbjct: 243  NNMCSFCIVPFTRGRERSRPVESIVREVAELWKEGVKEVMLLGQNVNSYNDASGFDKEVE 302

Query: 949  PGENWKLSEGFSSKCKVKKVGXXXXXXXXXXXXEYPEMRFRYTSPHPKDFPTDLLYLMRD 1128
            PG NWKLSEGFSSKCKVKK+G            E+PEMRFRYTSPHPKDFP +LLYLMRD
Sbjct: 303  PGANWKLSEGFSSKCKVKKMGLRFSDLLDRLSTEFPEMRFRYTSPHPKDFPDELLYLMRD 362

Query: 1129 RYNICKSIH 1155
            RYN+CKSIH
Sbjct: 363  RYNVCKSIH 371


>emb|CBI17436.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  553 bits (1424), Expect = e-155
 Identities = 271/338 (80%), Positives = 290/338 (85%)
 Frame = +1

Query: 142  SHSPFFNKTDVPSLRDFMSKAVSTSETQQVDPVSASEVLSKGRIYHETYGCQMNINDMEI 321
            SH P  NK++VPSL  F+++A   +   Q DPVSASE+L +GRIYHETYGCQMNINDMEI
Sbjct: 141  SHLPLSNKSEVPSLHSFIAQAAVATSEVQPDPVSASEILPRGRIYHETYGCQMNINDMEI 200

Query: 322  VLSIMKNAGYSEVAEVPENAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRRWKSNVAIGR 501
            VLSIMK AGY+EV EVPE+AE+IFINTCAIRDNAEQKVWQRLNYFWFLKR WKSNV+IGR
Sbjct: 201  VLSIMKKAGYNEVVEVPESAEVIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNVSIGR 260

Query: 502  SQSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLAEVDYGQKGINTLL 681
            + SLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL EVDYGQKGINTLL
Sbjct: 261  ADSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVDYGQKGINTLL 320

Query: 682  SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVDSIVKEVGEL 861
            SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPV+SIV+EV EL
Sbjct: 321  SLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVESIVREVAEL 380

Query: 862  WKEGVKEVMLLGQNVNSYNDDSGIAKDVEPGENWKLSEGFSSKCKVKKVGXXXXXXXXXX 1041
            WKEGVKEVMLLGQNVNSYND SG  K+VEPG NWKLSE                      
Sbjct: 381  WKEGVKEVMLLGQNVNSYNDASGFDKEVEPGANWKLSE---------------------- 418

Query: 1042 XXEYPEMRFRYTSPHPKDFPTDLLYLMRDRYNICKSIH 1155
              E+PEMRFRYTSPHPKDFP +LLYLMRDRYN+CKSIH
Sbjct: 419  --EFPEMRFRYTSPHPKDFPDELLYLMRDRYNVCKSIH 454


>dbj|BAD15110.2| similar to CDK5 regulatory subunit-associated protein [Nicotiana
            tabacum]
          Length = 623

 Score =  549 bits (1414), Expect = e-154
 Identities = 268/341 (78%), Positives = 294/341 (86%), Gaps = 3/341 (0%)
 Frame = +1

Query: 142  SHSPFFNKTDVPSLRDFMSKA---VSTSETQQVDPVSASEVLSKGRIYHETYGCQMNIND 312
            S +   +K  +P+LRDF+ KA   VS+S+ QQ + V  S+V+ +GRIYHETYGCQMN+ND
Sbjct: 70   SRTSLTSKNQIPTLRDFIPKATQTVSSSDVQQ-ESVMISDVMPRGRIYHETYGCQMNVND 128

Query: 313  MEIVLSIMKNAGYSEVAEVPENAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRRWKSNVA 492
            MEIVLSIMKNAGY+E  EVPENAEIIFINTCAIRDNAE KVWQRLNYFWFLKR+WKSNVA
Sbjct: 129  MEIVLSIMKNAGYTESVEVPENAEIIFINTCAIRDNAELKVWQRLNYFWFLKRQWKSNVA 188

Query: 493  IGRSQSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLAEVDYGQKGIN 672
             GRSQS HPPKV VLGCMAERLKDKILD+DKMVDVVCGPDAYRDLPRLL EVDYGQKGIN
Sbjct: 189  SGRSQSAHPPKVSVLGCMAERLKDKILDSDKMVDVVCGPDAYRDLPRLLEEVDYGQKGIN 248

Query: 673  TLLSLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVDSIVKEV 852
            TLLSLEETYADI+PVRISKNS++AFVS+MRGCNNMCSFCIVPFTRGRERSRPV+SIVKEV
Sbjct: 249  TLLSLEETYADINPVRISKNSISAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKEV 308

Query: 853  GELWKEGVKEVMLLGQNVNSYNDDSGIAKDVEPGENWKLSEGFSSKCKVKKVGXXXXXXX 1032
             ELWKEGVKEV LLGQNVNSYND SG+    EP  +W+LS+GFSS CKVK VG       
Sbjct: 309  AELWKEGVKEVTLLGQNVNSYNDTSGVENPAEPAVSWELSDGFSSMCKVKHVGLRFADLL 368

Query: 1033 XXXXXEYPEMRFRYTSPHPKDFPTDLLYLMRDRYNICKSIH 1155
                 E+PEMRFRYTSPHPKDFP DLLY+MRDRYNICKSIH
Sbjct: 369  DRLATEFPEMRFRYTSPHPKDFPDDLLYVMRDRYNICKSIH 409


>ref|XP_002310277.1| predicted protein [Populus trichocarpa] gi|222853180|gb|EEE90727.1|
            predicted protein [Populus trichocarpa]
          Length = 623

 Score =  546 bits (1408), Expect = e-153
 Identities = 280/402 (69%), Positives = 305/402 (75%), Gaps = 28/402 (6%)
 Frame = +1

Query: 34   KCCCLNLCFTSNRI----------HFPXXXXXXXXXXXXXXXXXXQSHSPFFNKTDVPSL 183
            +CCCL L   S++           HF                   QSH      T  P L
Sbjct: 15   RCCCLTLRSLSSKKPRPSYYHCYRHFNKGPLKKRNCSLTLSRNFSQSH--LSKNTQGPGL 72

Query: 184  RDFMSKAVSTSETQQVDPVSAS------------------EVLSKGRIYHETYGCQMNIN 309
              F+++A S++      PVSAS                  E+L +GRIYHETYGCQMN+N
Sbjct: 73   HHFVAQAASSASA----PVSASASQTQPQFVPAIEVPPDIEILPRGRIYHETYGCQMNVN 128

Query: 310  DMEIVLSIMKNAGYSEVAEVPENAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRRWKSNV 489
            DMEIVLSIMKNAGYSE+ +VPE+AEIIFINTCAIRDNAEQKVWQRLNYFWFLKR WKSNV
Sbjct: 129  DMEIVLSIMKNAGYSEIVDVPESAEIIFINTCAIRDNAEQKVWQRLNYFWFLKRHWKSNV 188

Query: 490  AIGRSQSLHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLAEVDYGQKGI 669
            AIGRSQS HPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLL EV+YGQKGI
Sbjct: 189  AIGRSQSHHPPKVVVLGCMAERLKDKILDADKMVDVVCGPDAYRDLPRLLEEVEYGQKGI 248

Query: 670  NTLLSLEETYADISPVRISKNSVTAFVSIMRGCNNMCSFCIVPFTRGRERSRPVDSIVKE 849
            NTLLSLEETYADISPVRISKNS+ AFVS+MRGCNNMCSFCIVPFTRGRERSRPV+SIVKE
Sbjct: 249  NTLLSLEETYADISPVRISKNSINAFVSVMRGCNNMCSFCIVPFTRGRERSRPVESIVKE 308

Query: 850  VGELWKEGVKEVMLLGQNVNSYNDDSGIAKDVEPGENWKLSEGFSSKCKVKKVGXXXXXX 1029
            V ELWKEGVKEV LLGQNVNSYND S I K+VEPG NWK S+GFSS CKVK+VG      
Sbjct: 309  VAELWKEGVKEVTLLGQNVNSYNDASEIEKEVEPGTNWKYSDGFSSTCKVKRVGLRFSDL 368

Query: 1030 XXXXXXEYPEMRFRYTSPHPKDFPTDLLYLMRDRYNICKSIH 1155
                  E+PEMRFRYTSPHPKDFP DLLY+MR+R+NICKSIH
Sbjct: 369  LDRLSTEFPEMRFRYTSPHPKDFPDDLLYVMRNRHNICKSIH 410