BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022626
         (780 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI22452.3| unnamed protein product [Vitis vinifera]              346   4e-93
ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis ...   346   4e-93
ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|3...   339   5e-91
ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycin...   336   4e-90
ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumi...   327   1e-87

>emb|CBI22452.3| unnamed protein product [Vitis vinifera]
          Length = 704

 Score =  346 bits (887), Expect = 4e-93
 Identities = 180/258 (69%), Positives = 212/258 (82%), Gaps = 2/258 (0%)
 Frame = +2

Query: 2    VTGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNDRMAVMTFVSSLPIRKIGGIGKVTEH 181
            VTGLTCSAGVAPNR++AKVCSDINKPNG FVLP++RMAVMTF+SSLPIRKIGGIGKVTEH
Sbjct: 233  VTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVMTFISSLPIRKIGGIGKVTEH 292

Query: 182  ILRDVLGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTF 361
            IL  V GI+TCEE+L+K  +L ALFS  S DFFLSVGLGLGKTDTPQ R RKSIS+ERTF
Sbjct: 293  ILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTF 352

Query: 362  SATEDEASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSG 541
            SAT+D A L+ KLA+++E LS DMQK+GL GRTLTLKLKTA+FEVR+RAV++QKYI +  
Sbjct: 353  SATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASFEVRSRAVTMQKYICSRE 412

Query: 542  DILHHASKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVESN 715
            DIL+HA KLLNAELPLSLRLIGLR+SHF++DK     D TQK L +FI++G+A+ K    
Sbjct: 413  DILNHALKLLNAELPLSLRLIGLRISHFNEDKDGHLSDPTQKTLANFIISGDASGKNVCE 472

Query: 716  DSLMXXXXXXXHTITDTE 769
             SL+       H + D E
Sbjct: 473  HSLLGSDTSDSHFMVDPE 490


>ref|XP_002264518.1| PREDICTED: DNA polymerase kappa-like [Vitis vinifera]
          Length = 661

 Score =  346 bits (887), Expect = 4e-93
 Identities = 180/258 (69%), Positives = 212/258 (82%), Gaps = 2/258 (0%)
 Frame = +2

Query: 2    VTGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNDRMAVMTFVSSLPIRKIGGIGKVTEH 181
            VTGLTCSAGVAPNR++AKVCSDINKPNG FVLP++RMAVMTF+SSLPIRKIGGIGKVTEH
Sbjct: 233  VTGLTCSAGVAPNRLLAKVCSDINKPNGQFVLPSNRMAVMTFISSLPIRKIGGIGKVTEH 292

Query: 182  ILRDVLGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTF 361
            IL  V GI+TCEE+L+K  +L ALFS  S DFFLSVGLGLGKTDTPQ R RKSIS+ERTF
Sbjct: 293  ILSGVFGINTCEEMLQKGGFLCALFSRSSADFFLSVGLGLGKTDTPQVRFRKSISNERTF 352

Query: 362  SATEDEASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSG 541
            SAT+D A L+ KLA+++E LS DMQK+GL GRTLTLKLKTA+FEVR+RAV++QKYI +  
Sbjct: 353  SATDDTALLYQKLAELSEMLSIDMQKEGLSGRTLTLKLKTASFEVRSRAVTMQKYICSRE 412

Query: 542  DILHHASKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVESN 715
            DIL+HA KLLNAELPLSLRLIGLR+SHF++DK     D TQK L +FI++G+A+ K    
Sbjct: 413  DILNHALKLLNAELPLSLRLIGLRISHFNEDKDGHLSDPTQKTLANFIISGDASGKNVCE 472

Query: 716  DSLMXXXXXXXHTITDTE 769
             SL+       H + D E
Sbjct: 473  HSLLGSDTSDSHFMVDPE 490


>ref|XP_003610613.1| DNA polymerase IV [Medicago truncatula] gi|355511948|gb|AES93571.1|
            DNA polymerase IV [Medicago truncatula]
          Length = 706

 Score =  339 bits (869), Expect = 5e-91
 Identities = 178/260 (68%), Positives = 209/260 (80%), Gaps = 2/260 (0%)
 Frame = +2

Query: 5    TGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNDRMAVMTFVSSLPIRKIGGIGKVTEHI 184
            TGLTCSAGVAPNR++AKVCSDINKPNG +VLPNDR+AVMTF+SSLPIRKIGGIGKVTE I
Sbjct: 255  TGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRLAVMTFISSLPIRKIGGIGKVTERI 314

Query: 185  LRDVLGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFS 364
            L++V GISTCE++L K +YL ALFS  + DFF SVGLGLGKTD+PQ R RKSIS+ERTFS
Sbjct: 315  LKEVFGISTCEQMLDKGSYLSALFSQSTADFFYSVGLGLGKTDSPQVRFRKSISNERTFS 374

Query: 365  ATEDEASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGD 544
            A+EDEA LH KLA++AE LSTDMQK+GL GRTLTLKLKTA+FEVR RAV+LQ YI +S D
Sbjct: 375  ASEDEALLHKKLAELAEMLSTDMQKEGLHGRTLTLKLKTASFEVRNRAVTLQNYINSSDD 434

Query: 545  ILHHASKLLNAELPLSLRLIGLRMSHFDDDK--LSPDVTQKKLTSFIVAGNATAKVESND 718
            IL HASKLL AELP+S+RLIGLR+S F   K   +PD TQK +T+FI +G A  K   N 
Sbjct: 435  ILKHASKLLKAELPVSVRLIGLRVSQFSGQKCGATPDPTQKTITNFITSGEANRK---NS 491

Query: 719  SLMXXXXXXXHTITDTEMGV 778
            S          T T+T++ +
Sbjct: 492  SFSDVTDHDFVTDTETDLSL 511


>ref|XP_003538172.1| PREDICTED: DNA polymerase kappa-like [Glycine max]
          Length = 663

 Score =  336 bits (861), Expect = 4e-90
 Identities = 172/238 (72%), Positives = 199/238 (83%), Gaps = 2/238 (0%)
 Frame = +2

Query: 5   TGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNDRMAVMTFVSSLPIRKIGGIGKVTEHI 184
           TGLTCSAGVAPNR++AKVCSDINKPNG +VLPNDRMAVMTFVSSLPIRKIGGIGKVTEHI
Sbjct: 229 TGLTCSAGVAPNRLLAKVCSDINKPNGQYVLPNDRMAVMTFVSSLPIRKIGGIGKVTEHI 288

Query: 185 LRDVLGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFS 364
           L+ V GI+TCE++L KS+Y+ A FS  + DFF SVGLGLG+TD+PQ R RKSISSERTFS
Sbjct: 289 LKGVFGINTCEQMLEKSSYICAFFSQSTADFFCSVGLGLGQTDSPQVRFRKSISSERTFS 348

Query: 365 ATEDEASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGD 544
           AT+DE  LH KL ++AE LS DMQK+GL GRTLTLKLKTA+FEVRTRAV+LQKYI +S D
Sbjct: 349 ATKDEVLLHKKLEELAEMLSADMQKEGLSGRTLTLKLKTASFEVRTRAVTLQKYISSSED 408

Query: 545 ILHHASKLLNAELPLSLRLIGLRMSHFDDDKLS--PDVTQKKLTSFIVAGNATAKVES 712
           IL HA KLL AELP+S+RLIGLR+S F+ DK S   D TQK +T+FI +G+      S
Sbjct: 409 ILKHAKKLLQAELPISVRLIGLRVSQFNGDKCSAKSDPTQKTITNFITSGDVNRNCSS 466


>ref|XP_004137085.1| PREDICTED: DNA polymerase kappa-like [Cucumis sativus]
           gi|449495765|ref|XP_004159938.1| PREDICTED: DNA
           polymerase kappa-like [Cucumis sativus]
          Length = 693

 Score =  327 bits (839), Expect = 1e-87
 Identities = 168/235 (71%), Positives = 197/235 (83%), Gaps = 2/235 (0%)
 Frame = +2

Query: 5   TGLTCSAGVAPNRMIAKVCSDINKPNGHFVLPNDRMAVMTFVSSLPIRKIGGIGKVTEHI 184
           TGLTCSAGVA NR++AKVCSDINKPNG F+LPNDR A++TF+SSLPIRKIGGIGKVTEHI
Sbjct: 230 TGLTCSAGVAANRLLAKVCSDINKPNGQFILPNDRRAIVTFISSLPIRKIGGIGKVTEHI 289

Query: 185 LRDVLGISTCEEILRKSAYLYALFSHPSIDFFLSVGLGLGKTDTPQFRSRKSISSERTFS 364
           L+D LGI+TCEE+L+K  +L ALFS  S DFFLSVGLGLG TDTPQ R RKSIS+ERTF+
Sbjct: 290 LKDALGINTCEEMLQKGGHLCALFSQSSADFFLSVGLGLGSTDTPQVRFRKSISNERTFA 349

Query: 365 ATEDEASLHNKLADIAESLSTDMQKQGLCGRTLTLKLKTATFEVRTRAVSLQKYIYTSGD 544
           AT DE  +  KLAD+AE LS DM+K+GL GRTLTLKLKTA+FEVRTRAV+LQKYI +S D
Sbjct: 350 ATTDERLIFQKLADLAEMLSMDMEKEGLTGRTLTLKLKTASFEVRTRAVTLQKYICSSSD 409

Query: 545 ILHHASKLLNAELPLSLRLIGLRMSHFDDDKLSP--DVTQKKLTSFIVAGNATAK 703
           IL  AS+LL AELP+SLRLIGLR+S F++D  +   D TQ  +T FI +G+AT K
Sbjct: 410 ILQQASRLLKAELPVSLRLIGLRISQFNEDGATAGLDPTQISITRFITSGDATRK 464