BLASTX nr result

ID: Coptis25_contig00022620 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022620
         (760 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...    77   2e-22
ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212...    65   2e-18
ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, par...    65   2e-18
emb|CBI18973.3| unnamed protein product [Vitis vinifera]               69   1e-09
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...    69   1e-09

>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score = 76.6 bits (187), Expect(2) = 2e-22
 Identities = 47/118 (39%), Positives = 59/118 (50%), Gaps = 30/118 (25%)
 Frame = -2

Query: 741 MELILPECPVCLQEFNNTDTIPRVVSCGH----SLIPQLPQRFQTQSVVNC--------F 598
           MEL LPECPVCLQ ++    IPRV++CGH    + I  LPQRF     + C        F
Sbjct: 1   MELQLPECPVCLQTYDTDQAIPRVLACGHTACEACITHLPQRF--LDTIRCPACTQLVKF 58

Query: 597 NDQGGPCSLPKN------------------KIPLVSEHAFFLPSFWSQEFFTNWKYWV 478
           +   GP +LPKN                  K P+ S H  FLP  WS +F++ WK WV
Sbjct: 59  SHLQGPSALPKNIDLLRLCLSEDSDYQKPQKRPITS-HYEFLPRLWSDQFYSVWKDWV 115



 Score = 55.1 bits (131), Expect(2) = 2e-22
 Identities = 32/69 (46%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
 Frame = -1

Query: 403 EGEMVSLLCIGT-SVMNDSVISYSYIVRVLQFLNEMNDGERDELCLILRALSLRVRVCKV 227
           E + VSL+ I + S +NDSVIS+SY+ R++  LN M + +R EL LILR    + + C V
Sbjct: 156 ENQNVSLVRIASLSFVNDSVISFSYMARIMNCLNGMKEEKRYELGLILR----QRKTCGV 211

Query: 226 YGLWMSSED 200
           YGLW   +D
Sbjct: 212 YGLWYDLDD 220



 Score = 70.1 bits (170), Expect = 5e-10
 Identities = 39/81 (48%), Positives = 56/81 (69%), Gaps = 2/81 (2%)
 Frame = -3

Query: 239 GL*GLW--IVDEFRRWVCERIDGDLGKKLDELRNGDVKENGEMKLAMPSFAIVGMELCEA 66
           G+ GLW  + D++   VCER +GDL +K+ EL+N +V E+G        FA++GME+C+A
Sbjct: 210 GVYGLWYDLDDQWMYLVCERWEGDLVEKISELKN-EVVEDGIF-----CFAMMGMEICKA 263

Query: 65  LANLHSDGLVCGSLALSCFSF 3
           +  LHS+GLV G LA SCF+F
Sbjct: 264 IIGLHSEGLVSGCLAPSCFNF 284


>ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
          Length = 761

 Score = 65.5 bits (158), Expect(2) = 2e-18
 Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 31/114 (27%)
 Frame = -2

Query: 726 PECPVCLQEFNNTDTIPRVVSCGHS----LIPQLPQRFQTQ------SVVNCFNDQGGPC 577
           PECPVCLQ ++    +PRV+SCGHS     +  LPQRF         +V+  F  QG   
Sbjct: 4   PECPVCLQTYDGESIVPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKFPSQGA-S 62

Query: 576 SLPKN---------------------KIPLVSEHAFFLPSFWSQEFFTNWKYWV 478
           +LPKN                     K  +   H FF P  WS EF+  WK+WV
Sbjct: 63  ALPKNIDLLRLCPEPNAGELVSKKSVKRSINQTHEFF-PRLWSDEFYRAWKHWV 115



 Score = 52.8 bits (125), Expect(2) = 2e-18
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -1

Query: 406 GEGEMVSLLCIGTSVM--NDSVISYSYIVRVLQFLNEMNDGERDELCLILRALSLR-VRV 236
           GE   VSL+ I +     ND +  +SY   VL+ LNE+ D E++EL LILRA  +   RV
Sbjct: 153 GEDRTVSLVRIVSLPCSNNDCLFKFSYTSMVLKCLNELKDEEKNELGLILRAGFVNGGRV 212

Query: 235 CKVYGLWMSSEDG 197
           C+ +GLW + EDG
Sbjct: 213 CRTFGLWGNLEDG 225


>ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
          Length = 741

 Score = 65.5 bits (158), Expect(2) = 2e-18
 Identities = 42/114 (36%), Positives = 53/114 (46%), Gaps = 31/114 (27%)
 Frame = -2

Query: 726 PECPVCLQEFNNTDTIPRVVSCGHS----LIPQLPQRFQTQ------SVVNCFNDQGGPC 577
           PECPVCLQ ++    +PRV+SCGHS     +  LPQRF         +V+  F  QG   
Sbjct: 4   PECPVCLQTYDGESIVPRVLSCGHSACGTCLENLPQRFPETIRCPACNVLVKFPSQGA-S 62

Query: 576 SLPKN---------------------KIPLVSEHAFFLPSFWSQEFFTNWKYWV 478
           +LPKN                     K  +   H FF P  WS EF+  WK+WV
Sbjct: 63  ALPKNIDLLRLCPEPNAGELVSKKSVKRSINQTHEFF-PRLWSDEFYRAWKHWV 115



 Score = 52.8 bits (125), Expect(2) = 2e-18
 Identities = 33/73 (45%), Positives = 45/73 (61%), Gaps = 3/73 (4%)
 Frame = -1

Query: 406 GEGEMVSLLCIGTSVM--NDSVISYSYIVRVLQFLNEMNDGERDELCLILRALSLR-VRV 236
           GE   VSL+ I +     ND +  +SY   VL+ LNE+ D E++EL LILRA  +   RV
Sbjct: 153 GEDRTVSLVRIVSLPCSNNDCLFKFSYTSMVLKCLNELKDEEKNELGLILRAGFVNGGRV 212

Query: 235 CKVYGLWMSSEDG 197
           C+ +GLW + EDG
Sbjct: 213 CRTFGLWGNLEDG 225


>emb|CBI18973.3| unnamed protein product [Vitis vinifera]
          Length = 734

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 8/87 (9%)
 Frame = -3

Query: 239 GL*GLW--IVDEFRRWVCERIDGDLGKKLDELRNGDVKENGEMKL------AMPSFAIVG 84
           G+ GLW  + D++   VCER +GDL +K+ EL+N  V  N +  L       +  FA++G
Sbjct: 84  GVYGLWYDLDDQWMYLVCERWEGDLVEKISELKNEVVGGNDKSLLNSAIEDGIFCFAMMG 143

Query: 83  MELCEALANLHSDGLVCGSLALSCFSF 3
           ME+C+A+  LHS+GLV G LA SCF+F
Sbjct: 144 MEICKAIIGLHSEGLVSGCLAPSCFNF 170


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score = 68.9 bits (167), Expect = 1e-09
 Identities = 42/121 (34%), Positives = 56/121 (46%), Gaps = 38/121 (31%)
 Frame = -2

Query: 726 PECPVCLQEFNNTDTIPRVVSCGHSL----IPQLPQRFQTQSVVNC--------FNDQGG 583
           PECPVCLQ F+  D IPRV+SCGHS+    + +LPQR+  Q  + C        +  Q G
Sbjct: 4   PECPVCLQSFDERDAIPRVLSCGHSVCEACLAELPQRY--QDTIRCPACTQLVKYPSQQG 61

Query: 582 PCSLPKN-----------------------KIP---LVSEHAFFLPSFWSQEFFTNWKYW 481
           P SLPKN                       +IP     +   ++ P F S E +  WK W
Sbjct: 62  PSSLPKNIDLLRLSLQHSPSPSSSSSSDHSQIPNQRSTTNSCYYHPPFSSHELYVTWKDW 121

Query: 480 V 478
           +
Sbjct: 122 I 122


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