BLASTX nr result

ID: Coptis25_contig00022619 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022619
         (1077 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248...   270   5e-70
ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793...   218   2e-54
ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, par...   204   3e-50
ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212...   204   3e-50
ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ric...   192   2e-46

>ref|XP_002284600.2| PREDICTED: uncharacterized protein LOC100248990 [Vitis vinifera]
          Length = 1817

 Score =  270 bits (690), Expect = 5e-70
 Identities = 156/363 (42%), Positives = 218/363 (60%), Gaps = 5/363 (1%)
 Frame = -2

Query: 1076 SCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQQNPTS 897
            +CGH+ CE C+  LPQRF +TIRCP+C QLV + + QG P +LPKNIDLL     ++   
Sbjct: 26   ACGHTACEACITHLPQRFLDTIRCPACTQLVKFSHLQG-PSALPKNIDLLRLCLSEDSDY 84

Query: 896  LKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVLPMGLVSVETTGN-DLFSLGYGKI 720
             K  K+      ++ H  FLP  WS  F++ WKDWVLP   VSVE  G  D   + +G+I
Sbjct: 85   QKPQKRP-----ITSHYEFLPRLWSDQFYSVWKDWVLPNDAVSVEPRGGKDFCDVIHGRI 139

Query: 719  VKCDEAKGRV---GYREGEMVSLLCIAT-SVMNDSVISYSYIVRVMQFLNEMNDGERDEX 552
                 +   V     +E + VSL+ IA+ S +NDSVIS+SY+ R+M  LN M + +R E 
Sbjct: 140  ASSSSSSPSVIRWWMKENQNVSLVRIASLSFVNDSVISFSYMARIMNCLNGMKEEKRYEL 199

Query: 551  XXXXXXXXXXXXXXXVYGLWMSSEDGCVFLVCERIDGDLGKKLDELGNGDVEENGEMKWA 372
                            YGLW   +D  ++LVCER +GDL +K+ EL N  VE+       
Sbjct: 200  GLILRQRKTCGV----YGLWYDLDDQWMYLVCERWEGDLVEKISELKNEVVEDG------ 249

Query: 371  MPSFAMVGMELCEALASLHSDGLVCGSLAMSCFSFDCFGRGFVNPNEVLVLGRRVRKCIA 192
            +  FAM+GME+C+A+  LHS+GLV G LA SCF+FD  G  FV+ NE+LV GR++ + + 
Sbjct: 250  IFCFAMMGMEICKAIIGLHSEGLVSGCLAPSCFNFDGLGHVFVDLNEMLVTGRKIHRSLV 309

Query: 191  EFAICGSQRSNDSKTETIFHDLLELRAFVSPEIIIKLLHVEGVIQDLSSLECVVGYSSDV 12
            E ++ G +R +D +   I  +L++  AF+SPE+ I+LL  EG+  +  SL   VGYSSDV
Sbjct: 310  E-SVSGRRRIDDKEMGIISTNLIKREAFLSPEVFIELLQKEGIELECDSLSYSVGYSSDV 368

Query: 11   WSL 3
            WSL
Sbjct: 369  WSL 371


>ref|XP_003527950.1| PREDICTED: uncharacterized protein LOC100793437 [Glycine max]
          Length = 1815

 Score =  218 bits (556), Expect = 2e-54
 Identities = 143/371 (38%), Positives = 187/371 (50%), Gaps = 13/371 (3%)
 Frame = -2

Query: 1076 SCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQQNPTS 897
            SCGHS CE CL +LPQR+Q+TIRCP+C QLV Y + Q GP SLPKNIDLL    Q +P+ 
Sbjct: 24   SCGHSVCEACLAELPQRYQDTIRCPACTQLVKYPSQQ-GPSSLPKNIDLLRLSLQHSPSP 82

Query: 896  LKS--------PKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVLPMGLVSVETTGNDLF 741
              S        P Q S+T       ++ P F S   +  WKDW+LP   V  +      F
Sbjct: 83   SSSSSSDHSQIPNQRSTT----NSCYYHPPFSSHELYVTWKDWILPHDAVLTDDHCIGWF 138

Query: 740  SLGYGKIVKCDEAKGRVGYREGEMVSLLCIATSVMND-SVISYSYIVRVMQFLNEMNDGE 564
            S            KGR  +     VSL  I      D S   +SY+  V++ L  MN+G 
Sbjct: 139  S----------STKGRGCFGVNRSVSLAPIVCFPPRDRSKFRFSYVAWVIKCLEGMNEGA 188

Query: 563  RDEXXXXXXXXXXXXXXXXVYGLWMSSEDGCVFLVCERIDGDLGKKLDELGNG--DVEEN 390
            ++E                VYGLW    +G +++VCER   +L  K  ELGNG   V E 
Sbjct: 189  KEELALILEASVRQGRMCRVYGLWSEGVEGPLYMVCERQRCNLLDKFGELGNGFLAVSEG 248

Query: 389  G-EM-KWAMPSFAMVGMELCEALASLHSDGLVCGSLAMSCFSFDCFGRGFVNPNEVLVLG 216
            G E+ K  + SF M+G  +CEA+ +LH +GLV G L +SCFSFD  G   V+ NE L+L 
Sbjct: 249  GLELDKGGIFSFLMIGKGICEAVLALHLEGLVAGCLGLSCFSFDELGGICVDLNEALMLA 308

Query: 215  RRVRKCIAEFAICGSQRSNDSKTETIFHDLLELRAFVSPEIIIKLLHVEGVIQDLSSLEC 36
            R+    +          S + K E +    LE   F SPE++ +LLH  G   D      
Sbjct: 309  RKFVNAV----------SVEHKEEAMCKGCLENEVFASPEVLYELLHKRGTAPDSGHSRY 358

Query: 35   VVGYSSDVWSL 3
             +GY SDVWSL
Sbjct: 359  PIGYGSDVWSL 369


>ref|XP_004161204.1| PREDICTED: uncharacterized LOC101212974, partial [Cucumis sativus]
          Length = 741

 Score =  204 bits (519), Expect = 3e-50
 Identities = 134/370 (36%), Positives = 194/370 (52%), Gaps = 12/370 (3%)
 Frame = -2

Query: 1076 SCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQQNPTS 897
            SCGHS C TCL  LPQRF  TIRCP+CN LV +     G  +LPKNIDLL    + N   
Sbjct: 24   SCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGASALPKNIDLLRLCPEPNAGE 81

Query: 896  LKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVLPMGLVSVETTG--NDLFSLGYGK 723
            L S K  S    ++Q   F P  WS  F+  WK WVLP   VS+E     + +  L  G+
Sbjct: 82   LVSKK--SVKRSINQTHEFFPRLWSDEFYRAWKHWVLPHDAVSIERCDGVDGVEKLLLGR 139

Query: 722  IVKCDEAKGRVGYREGEMVSLLCIAT--SVMNDSVISYSYIVRVMQFLNEMNDGERDE-X 552
            I    ++   +   E   VSL+ I +     ND +  +SY   V++ LNE+ D E++E  
Sbjct: 140  ICPVSDSSFPITVGEDRTVSLVRIVSLPCSNNDCLFKFSYTSMVLKCLNELKDEEKNELG 199

Query: 551  XXXXXXXXXXXXXXXVYGLWMSSEDGCVFLVCERIDGDL-------GKKLDELGNGDVEE 393
                            +GLW + EDG ++LVCER + +L        KKLD      + +
Sbjct: 200  LILRAGFVNGGRVCRTFGLWGNLEDGFLYLVCERRNDNLLEMINNWIKKLDFRNKVCLNK 259

Query: 392  NGEMKWAMPSFAMVGMELCEALASLHSDGLVCGSLAMSCFSFDCFGRGFVNPNEVLVLGR 213
            +      + SFA++  ELC+A+ ++HS  L  G L++SCFS   FG   V+ N VLV+GR
Sbjct: 260  DD-----LLSFAVIATELCDAIIAMHSLRLSTGFLSLSCFSLGVFGSVCVDINGVLVMGR 314

Query: 212  RVRKCIAEFAICGSQRSNDSKTETIFHDLLELRAFVSPEIIIKLLHVEGVIQDLSSLECV 33
             V + + E A+    + +  +   +  +L++  AFV PE+++KLL+ E V  + S+  C 
Sbjct: 315  TVCETVIE-AVSSGSKLHMKELGMLTSNLIKKEAFVPPEVLLKLLNKEDVGLECSTTLCS 373

Query: 32   VGYSSDVWSL 3
            VG   D+WSL
Sbjct: 374  VGNKCDIWSL 383


>ref|XP_004147423.1| PREDICTED: uncharacterized protein LOC101212974 [Cucumis sativus]
          Length = 761

 Score =  204 bits (519), Expect = 3e-50
 Identities = 134/370 (36%), Positives = 194/370 (52%), Gaps = 12/370 (3%)
 Frame = -2

Query: 1076 SCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQQNPTS 897
            SCGHS C TCL  LPQRF  TIRCP+CN LV +     G  +LPKNIDLL    + N   
Sbjct: 24   SCGHSACGTCLENLPQRFPETIRCPACNVLVKF--PSQGASALPKNIDLLRLCPEPNAGE 81

Query: 896  LKSPKQESSTTLVSQHAFFLPSFWSQHFFTNWKDWVLPMGLVSVETTG--NDLFSLGYGK 723
            L S K  S    ++Q   F P  WS  F+  WK WVLP   VS+E     + +  L  G+
Sbjct: 82   LVSKK--SVKRSINQTHEFFPRLWSDEFYRAWKHWVLPHDAVSIERCDGVDGVEKLLLGR 139

Query: 722  IVKCDEAKGRVGYREGEMVSLLCIAT--SVMNDSVISYSYIVRVMQFLNEMNDGERDE-X 552
            I    ++   +   E   VSL+ I +     ND +  +SY   V++ LNE+ D E++E  
Sbjct: 140  ICPVSDSSFPITVGEDRTVSLVRIVSLPCSNNDCLFKFSYTSMVLKCLNELKDEEKNELG 199

Query: 551  XXXXXXXXXXXXXXXVYGLWMSSEDGCVFLVCERIDGDL-------GKKLDELGNGDVEE 393
                            +GLW + EDG ++LVCER + +L        KKLD      + +
Sbjct: 200  LILRAGFVNGGRVCRTFGLWGNLEDGFLYLVCERRNDNLLEMINNWIKKLDFRNKVCLNK 259

Query: 392  NGEMKWAMPSFAMVGMELCEALASLHSDGLVCGSLAMSCFSFDCFGRGFVNPNEVLVLGR 213
            +      + SFA++  ELC+A+ ++HS  L  G L++SCFS   FG   V+ N VLV+GR
Sbjct: 260  DD-----LLSFAVIATELCDAIIAMHSLRLSTGFLSLSCFSLGVFGSVCVDINGVLVMGR 314

Query: 212  RVRKCIAEFAICGSQRSNDSKTETIFHDLLELRAFVSPEIIIKLLHVEGVIQDLSSLECV 33
             V + + E A+    + +  +   +  +L++  AFV PE+++KLL+ E V  + S+  C 
Sbjct: 315  TVCETVIE-AVSSGSKLHMKELGMLTSNLIKKEAFVPPEVLLKLLNKEDVGLECSTTLCS 373

Query: 32   VGYSSDVWSL 3
            VG   D+WSL
Sbjct: 374  VGNKCDIWSL 383


>ref|XP_002520315.1| F-box and wd40 domain protein, putative [Ricinus communis]
            gi|223540534|gb|EEF42101.1| F-box and wd40 domain
            protein, putative [Ricinus communis]
          Length = 1794

 Score =  192 bits (487), Expect = 2e-46
 Identities = 123/364 (33%), Positives = 185/364 (50%), Gaps = 6/364 (1%)
 Frame = -2

Query: 1076 SCGHSTCETCLPQLPQRFQNTIRCPSCNQLVNYFNDQGGPCSLPKNIDLLSFISQQNPTS 897
            +CGH+TCE+CL  LPQ++  TIRCP+C QLV +     GP SLPKNIDLL  I    PT+
Sbjct: 24   TCGHTTCESCLKSLPQKYPQTIRCPACVQLVKF--PSLGPSSLPKNIDLLRLI----PTN 77

Query: 896  LKSPKQESSTTLVSQHAFFLPSF-WSQHFFTNWKDWVLPMGLVSVETTGNDLFSLGYGKI 720
             K  KQ  + +  S H     SF WS  FF  WK+WVL    V V+ +  D   L  G  
Sbjct: 78   HKK-KQPINHSRSSDHQVDSASFLWSDDFFVTWKNWVLEKDAVLVDESEKDCGVLKDGN- 135

Query: 719  VKCDEAKGRVGYREGEMVSLLCIATSVMNDS----VISYSYIVRVMQFLNEMNDGERDEX 552
                           + + L  +A  +++ +    +   SY  R+M  L  + +  R+E 
Sbjct: 136  ---------------KKLRLFKVADGLLDVNGSGFIFKLSYASRIMNCLYGLGNVVREEL 180

Query: 551  XXXXXXXXXXXXXXXVYGLWMSSEDGCVFLVCERIDGDLGKKLDELGNGDVEENGEMKWA 372
                            YG W  S++G ++LVCER +      +  + +    +NG  K  
Sbjct: 181  SLILGICLEHYRIGKFYGFWCDSQNGFLYLVCERFN------VGVMDHSGCSKNGSSKDG 234

Query: 371  MPSFAMVGMELCEALASLHSDGLVCGSLAMSCFSFDCFGRGFVNPNEVLVLGRRVRKCIA 192
            + SFA+ GME+CEA+  LH +GL  G L+++CF  D FG  +++  EVL+  R+V + + 
Sbjct: 235  LASFAVTGMEICEAIIGLHLEGLFMGCLSLTCFELDDFGHVYLSLGEVLLTSRKVHESVM 294

Query: 191  EFAICGSQRSNDSKTETIFHDLLELRAFVSPEIIIKLLHVEGV-IQDLSSLECVVGYSSD 15
              A  GS+R  D +   +  +L +   FVSPE++ ++   E + ++  SS      YSSD
Sbjct: 295  A-ARSGSRRIGDIEMGILVTELFKREVFVSPEMLFEIFKKESIEVKCGSSFSYSAVYSSD 353

Query: 14   VWSL 3
            +WSL
Sbjct: 354  IWSL 357


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