BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022618
         (287 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE76494.1| unknown [Picea sitchensis]                              61   1e-07
gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]        55   8e-06

>gb|ADE76494.1| unknown [Picea sitchensis]
          Length = 302

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 13/79 (16%)
 Frame = +3

Query: 48  VVQGLSNMSTMNTVEEPKTTSLKRGRPRKHSP-------LTPTCAFPSL------KKSRG 188
           V+ G SN++TM           KRGRPRK+ P       L+P  A P +      K+ RG
Sbjct: 26  VIHGASNVNTMKR---------KRGRPRKYGPDGSMALALSPFSALPGMTGSSSQKRGRG 76

Query: 189 RPPGTGKKQRLAALGSPGL 245
           RPPGTG+KQ+LAALGS G+
Sbjct: 77  RPPGTGRKQQLAALGSAGV 95


>gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum]
          Length = 340

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 13/69 (18%)
 Frame = +3

Query: 66  NMSTMNTVEEPKTTSLKRGRPRKHSP-------LTPTCAF------PSLKKSRGRPPGTG 206
           N+ T   V+  +T   KRGRPRK+ P       LTP  A       P  K+ RGRPPGTG
Sbjct: 76  NVGTPPAVQPGETVKRKRGRPRKYGPDGTVSLALTPASATHPGTITPIQKRGRGRPPGTG 135

Query: 207 KKQRLAALG 233
           +KQ+L++LG
Sbjct: 136 RKQQLSSLG 144