BLASTX nr result
ID: Coptis25_contig00022618
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022618 (287 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ADE76494.1| unknown [Picea sitchensis] 61 1e-07 gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum] 55 8e-06 >gb|ADE76494.1| unknown [Picea sitchensis] Length = 302 Score = 60.8 bits (146), Expect = 1e-07 Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 13/79 (16%) Frame = +3 Query: 48 VVQGLSNMSTMNTVEEPKTTSLKRGRPRKHSP-------LTPTCAFPSL------KKSRG 188 V+ G SN++TM KRGRPRK+ P L+P A P + K+ RG Sbjct: 26 VIHGASNVNTMKR---------KRGRPRKYGPDGSMALALSPFSALPGMTGSSSQKRGRG 76 Query: 189 RPPGTGKKQRLAALGSPGL 245 RPPGTG+KQ+LAALGS G+ Sbjct: 77 RPPGTGRKQQLAALGSAGV 95 >gb|ABO42262.1| AT-hook DNA-binding protein [Gossypium hirsutum] Length = 340 Score = 54.7 bits (130), Expect = 8e-06 Identities = 31/69 (44%), Positives = 40/69 (57%), Gaps = 13/69 (18%) Frame = +3 Query: 66 NMSTMNTVEEPKTTSLKRGRPRKHSP-------LTPTCAF------PSLKKSRGRPPGTG 206 N+ T V+ +T KRGRPRK+ P LTP A P K+ RGRPPGTG Sbjct: 76 NVGTPPAVQPGETVKRKRGRPRKYGPDGTVSLALTPASATHPGTITPIQKRGRGRPPGTG 135 Query: 207 KKQRLAALG 233 +KQ+L++LG Sbjct: 136 RKQQLSSLG 144