BLASTX nr result

ID: Coptis25_contig00022607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022607
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|2...    65   2e-08
ref|XP_002520702.1| conserved hypothetical protein [Ricinus comm...    63   9e-08

>ref|XP_002320378.1| predicted protein [Populus trichocarpa] gi|222861151|gb|EEE98693.1|
           predicted protein [Populus trichocarpa]
          Length = 136

 Score = 64.7 bits (156), Expect = 2e-08
 Identities = 49/149 (32%), Positives = 71/149 (47%), Gaps = 14/149 (9%)
 Frame = -3

Query: 558 IDVSSFFVVESSGDSEVDLDPIISTGSKNIALAENDAASC-CDEYDVASMDD-----CVD 397
           +DVS F +VE++GDSEVD DP +ST   ++   ++DA SC CD  D + + D     C +
Sbjct: 8   VDVSPFLLVEAAGDSEVDSDPTMST--IDLVDDDDDAESCSCDTSDHSCVSDIIKGACSE 65

Query: 396 IELQENNKEDCYHDNEVNYGSHIFGDGSWTCQK--------MDFSYQSCISIQTAEHEHE 241
           +E  + N      D++         +G   CQ         +    +SC+S+        
Sbjct: 66  VEAYQVNYNVVDDDDDEEEEE----EGVEVCQSWVHHVHVGLPVKQKSCVSV-------- 113

Query: 240 KQPKGGDDVSEELMNEEEKSRLFWITCLA 154
                  D S E MNE+EK RLFW  CLA
Sbjct: 114 -------DSSNESMNEKEKDRLFWEACLA 135


>ref|XP_002520702.1| conserved hypothetical protein [Ricinus communis]
           gi|223540087|gb|EEF41664.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 151

 Score = 62.8 bits (151), Expect = 9e-08
 Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 20/162 (12%)
 Frame = -3

Query: 579 EMDLRYVIDVSSFFVVESSGDSEVDLDPIISTGSKNIALA---ENDAASC-CDEYDVASM 412
           +MD +  +D+SS F+VE+SGDSEV LDP      K++A A    +DA SC CD  D    
Sbjct: 11  QMDTKKRVDLSSCFLVEASGDSEVGLDP------KDLAAAPDDNDDAESCSCDVSDCYYY 64

Query: 411 DDCV-------DIE------LQENNKEDCYHDNEVNYGSHIFGDGSWT---CQKMDFSYQ 280
             CV       ++E      + ++NKE  Y ++E      +    +W       +  + +
Sbjct: 65  YSCVGDNTNSGEVEEASVHGVTDHNKEQ-YQEHEDEDEDEVQSYRTWVDGHINGVQVNKK 123

Query: 279 SCISIQTAEHEHEKQPKGGDDVSEELMNEEEKSRLFWITCLA 154
           SC+S+++               + E MNE+E++RLFW +CLA
Sbjct: 124 SCVSVES---------------TSEPMNEKERNRLFWESCLA 150


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