BLASTX nr result

ID: Coptis25_contig00022605 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022605
         (1080 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI36841.3| unnamed protein product [Vitis vinifera]              247   4e-63
ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4...   247   4e-63
ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4...   239   7e-61
ref|XP_003591546.1| ABC transporter C family protein [Medicago t...   237   3e-60
ref|XP_002523063.1| multidrug resistance-associated protein 2, 6...   236   6e-60

>emb|CBI36841.3| unnamed protein product [Vitis vinifera]
          Length = 1079

 Score =  247 bits (630), Expect = 4e-63
 Identities = 118/169 (69%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
 Frame = +1

Query: 208  ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 387
            +S+ + +S   V+   IY    VEN+M+SVERIKQF NIPSEA W IKD LP PNWPTHG
Sbjct: 776  LSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHG 835

Query: 388  DVDIKNLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 564
            +V++K+LQVRYRPNSPL+L+GITL+I+G EKIG+VGRTGSGKSTL+Q FFR++E SGGKI
Sbjct: 836  NVELKDLQVRYRPNSPLVLKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKI 895

Query: 565  CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 711
             ID +DI  LG+HDLRSRFGIIPQEPVLF+GT+RSN+DP+G YSD+EIW
Sbjct: 896  IIDGIDIGMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYSDEEIW 944


>ref|XP_002265012.1| PREDICTED: ABC transporter C family member 4-like [Vitis vinifera]
          Length = 1509

 Score =  247 bits (630), Expect = 4e-63
 Identities = 118/169 (69%), Positives = 144/169 (85%), Gaps = 1/169 (0%)
 Frame = +1

Query: 208  ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 387
            +S+ + +S   V+   IY    VEN+M+SVERIKQF NIPSEA W IKD LP PNWPTHG
Sbjct: 1206 LSLSYGLSLNSVLFWAIYMSCFVENKMVSVERIKQFTNIPSEAAWQIKDRLPPPNWPTHG 1265

Query: 388  DVDIKNLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 564
            +V++K+LQVRYRPNSPL+L+GITL+I+G EKIG+VGRTGSGKSTL+Q FFR++E SGGKI
Sbjct: 1266 NVELKDLQVRYRPNSPLVLKGITLNIRGKEKIGVVGRTGSGKSTLVQVFFRLVEPSGGKI 1325

Query: 565  CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 711
             ID +DI  LG+HDLRSRFGIIPQEPVLF+GT+RSN+DP+G YSD+EIW
Sbjct: 1326 IIDGIDIGMLGLHDLRSRFGIIPQEPVLFEGTVRSNVDPVGQYSDEEIW 1374


>ref|XP_003536885.1| PREDICTED: ABC transporter C family member 4-like [Glycine max]
          Length = 1501

 Score =  239 bits (611), Expect = 7e-61
 Identities = 117/169 (69%), Positives = 140/169 (82%), Gaps = 1/169 (0%)
 Frame = +1

Query: 208  ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 387
            +S+ + +S   V+   IY    +EN+M+SVERIKQF NIPSEA WNIKD LP  NWP  G
Sbjct: 1198 LSLSYGLSLNAVMFWAIYMSCFIENKMVSVERIKQFTNIPSEASWNIKDRLPPANWPGEG 1257

Query: 388  DVDIKNLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 564
             VDIK+LQVRYRPN+PL+L+GITLSI G EKIG+VGRTGSGKSTL+Q FFR++E +GGKI
Sbjct: 1258 HVDIKDLQVRYRPNTPLVLKGITLSINGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKI 1317

Query: 565  CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 711
             ID +DIS LG+HDLRSRFGIIPQEPVLF+GT+RSNIDP G Y+D+EIW
Sbjct: 1318 IIDGIDISALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDEEIW 1366


>ref|XP_003591546.1| ABC transporter C family protein [Medicago truncatula]
            gi|355480594|gb|AES61797.1| ABC transporter C family
            protein [Medicago truncatula]
          Length = 1515

 Score =  237 bits (605), Expect = 3e-60
 Identities = 115/169 (68%), Positives = 138/169 (81%), Gaps = 1/169 (0%)
 Frame = +1

Query: 208  ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 387
            +S+ + +S   V+   IY    +EN+M+SVERIKQF NIPSEA WNIKD  P PNWP  G
Sbjct: 1212 LSLSYGLSLNSVLFWAIYMSCFIENKMVSVERIKQFSNIPSEAAWNIKDRSPPPNWPGQG 1271

Query: 388  DVDIKNLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 564
             VDIK+LQVRYRPN+PL+L+GITLSI G EK+G+VGRTGSGKSTL+Q FFR++E +GGKI
Sbjct: 1272 HVDIKDLQVRYRPNTPLVLKGITLSISGGEKVGVVGRTGSGKSTLIQVFFRLVEPTGGKI 1331

Query: 565  CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 711
             ID +DI  LG+HDLRSRFGIIPQEPVLF+GT+RSNIDP G Y+D EIW
Sbjct: 1332 IIDGIDICALGLHDLRSRFGIIPQEPVLFEGTVRSNIDPTGQYTDDEIW 1380


>ref|XP_002523063.1| multidrug resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
            gi|223537625|gb|EEF39248.1| multidrug
            resistance-associated protein 2, 6 (mrp2, 6),
            abc-transoprter, putative [Ricinus communis]
          Length = 1506

 Score =  236 bits (603), Expect = 6e-60
 Identities = 114/169 (67%), Positives = 141/169 (83%), Gaps = 1/169 (0%)
 Frame = +1

Query: 208  ISIIWSVS*RGVILCRIYELLCVENRMISVERIKQFINIPSEAPWNIKDCLPSPNWPTHG 387
            +S+ + +S  GV+   IY    VENRM+SVERIKQF NIPSEA W IKD +P P+WP  G
Sbjct: 1203 LSLSYGLSLNGVLFWAIYMSCFVENRMVSVERIKQFTNIPSEAAWKIKDRIPPPSWPAQG 1262

Query: 388  DVDIKNLQVRYRPNSPLILEGITLSIQG-EKIGIVGRTGSGKSTLLQSFFRVIEVSGGKI 564
            +VD+K+LQV+YRPN+PL+L+GITLSI G EKIG+VGRTGSGKSTL+Q FFR++E +GGKI
Sbjct: 1263 NVDLKDLQVKYRPNTPLVLKGITLSIYGGEKIGVVGRTGSGKSTLIQVFFRLVEPTGGKI 1322

Query: 565  CIDVVDISTLGVHDLRSRFGIIPQEPVLFQGTIRSNIDPIGIYSDKEIW 711
             ID +DI  LG+ DLRSRFGIIPQEPVLF+GT+RSNIDPIG Y+D++IW
Sbjct: 1323 IIDGIDICMLGLQDLRSRFGIIPQEPVLFEGTVRSNIDPIGQYTDEQIW 1371


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