BLASTX nr result

ID: Coptis25_contig00022597 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022597
         (1259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare]     44   1e-07
ref|XP_003567110.1| PREDICTED: dihydroorotase, mitochondrial-lik...    44   8e-07
ref|XP_002456350.1| hypothetical protein SORBIDRAFT_03g034450 [S...    42   2e-06
gb|ACG45127.1| dihydroorotase [Zea mays] gi|414880492|tpg|DAA576...    42   2e-06
ref|NP_001131817.1| uncharacterized protein LOC100193190 [Zea ma...    42   2e-06

>dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 389

 Score = 44.3 bits (103), Expect(2) = 1e-07
 Identities = 21/24 (87%), Positives = 22/24 (91%)
 Frame = +3

Query: 819 VVFAVELYPAGATRNSQDGVTQIL 890
           VVFAV+LYPAGAT NSQDGVT IL
Sbjct: 133 VVFAVKLYPAGATTNSQDGVTDIL 156



 Score = 38.9 bits (89), Expect(2) = 1e-07
 Identities = 17/23 (73%), Positives = 20/23 (86%)
 Frame = +2

Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949
           TD++G CLPVL+EMVK  MPLLV
Sbjct: 153 TDILGKCLPVLEEMVKQEMPLLV 175


>ref|XP_003567110.1| PREDICTED: dihydroorotase, mitochondrial-like [Brachypodium
           distachyon]
          Length = 402

 Score = 43.5 bits (101), Expect(2) = 8e-07
 Identities = 20/24 (83%), Positives = 22/24 (91%)
 Frame = +3

Query: 819 VVFAVELYPAGATRNSQDGVTQIL 890
           VVFAV+LYPAGAT NSQDGVT I+
Sbjct: 146 VVFAVKLYPAGATTNSQDGVTDIM 169



 Score = 37.0 bits (84), Expect(2) = 8e-07
 Identities = 15/23 (65%), Positives = 20/23 (86%)
 Frame = +2

Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949
           TD++G CLPVL+EM++  MPLLV
Sbjct: 166 TDIMGKCLPVLEEMIRQEMPLLV 188


>ref|XP_002456350.1| hypothetical protein SORBIDRAFT_03g034450 [Sorghum bicolor]
           gi|241928325|gb|EES01470.1| hypothetical protein
           SORBIDRAFT_03g034450 [Sorghum bicolor]
          Length = 402

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +3

Query: 819 VVFAVELYPAGATRNSQDGVTQI 887
           ++FAV+LYPAGAT NSQDGVT I
Sbjct: 146 IIFAVKLYPAGATTNSQDGVTDI 168



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2

Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949
           TD+ G CLPVL+EMV+  MPLLV
Sbjct: 166 TDIFGKCLPVLEEMVRQEMPLLV 188


>gb|ACG45127.1| dihydroorotase [Zea mays] gi|414880492|tpg|DAA57623.1| TPA:
           dihydroorotase isoform 1 [Zea mays]
           gi|414880493|tpg|DAA57624.1| TPA: dihydroorotase isoform
           2 [Zea mays]
          Length = 401

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +3

Query: 819 VVFAVELYPAGATRNSQDGVTQI 887
           ++FAV+LYPAGAT NSQDGVT I
Sbjct: 145 IIFAVKLYPAGATTNSQDGVTDI 167



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2

Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949
           TD+ G CLPVL+EMV+  MPLLV
Sbjct: 165 TDIFGKCLPVLEEMVRQEMPLLV 187


>ref|NP_001131817.1| uncharacterized protein LOC100193190 [Zea mays]
           gi|194692622|gb|ACF80395.1| unknown [Zea mays]
          Length = 401

 Score = 42.0 bits (97), Expect(2) = 2e-06
 Identities = 18/23 (78%), Positives = 21/23 (91%)
 Frame = +3

Query: 819 VVFAVELYPAGATRNSQDGVTQI 887
           ++FAV+LYPAGAT NSQDGVT I
Sbjct: 145 IIFAVKLYPAGATTNSQDGVTDI 167



 Score = 37.0 bits (84), Expect(2) = 2e-06
 Identities = 16/23 (69%), Positives = 19/23 (82%)
 Frame = +2

Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949
           TD+ G CLPVL+EMV+  MPLLV
Sbjct: 165 TDIFGKCLPVLEEMVRQEMPLLV 187


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