BLASTX nr result
ID: Coptis25_contig00022597
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis25_contig00022597 (1259 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare] 44 1e-07 ref|XP_003567110.1| PREDICTED: dihydroorotase, mitochondrial-lik... 44 8e-07 ref|XP_002456350.1| hypothetical protein SORBIDRAFT_03g034450 [S... 42 2e-06 gb|ACG45127.1| dihydroorotase [Zea mays] gi|414880492|tpg|DAA576... 42 2e-06 ref|NP_001131817.1| uncharacterized protein LOC100193190 [Zea ma... 42 2e-06 >dbj|BAK01116.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 389 Score = 44.3 bits (103), Expect(2) = 1e-07 Identities = 21/24 (87%), Positives = 22/24 (91%) Frame = +3 Query: 819 VVFAVELYPAGATRNSQDGVTQIL 890 VVFAV+LYPAGAT NSQDGVT IL Sbjct: 133 VVFAVKLYPAGATTNSQDGVTDIL 156 Score = 38.9 bits (89), Expect(2) = 1e-07 Identities = 17/23 (73%), Positives = 20/23 (86%) Frame = +2 Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949 TD++G CLPVL+EMVK MPLLV Sbjct: 153 TDILGKCLPVLEEMVKQEMPLLV 175 >ref|XP_003567110.1| PREDICTED: dihydroorotase, mitochondrial-like [Brachypodium distachyon] Length = 402 Score = 43.5 bits (101), Expect(2) = 8e-07 Identities = 20/24 (83%), Positives = 22/24 (91%) Frame = +3 Query: 819 VVFAVELYPAGATRNSQDGVTQIL 890 VVFAV+LYPAGAT NSQDGVT I+ Sbjct: 146 VVFAVKLYPAGATTNSQDGVTDIM 169 Score = 37.0 bits (84), Expect(2) = 8e-07 Identities = 15/23 (65%), Positives = 20/23 (86%) Frame = +2 Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949 TD++G CLPVL+EM++ MPLLV Sbjct: 166 TDIMGKCLPVLEEMIRQEMPLLV 188 >ref|XP_002456350.1| hypothetical protein SORBIDRAFT_03g034450 [Sorghum bicolor] gi|241928325|gb|EES01470.1| hypothetical protein SORBIDRAFT_03g034450 [Sorghum bicolor] Length = 402 Score = 42.0 bits (97), Expect(2) = 2e-06 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +3 Query: 819 VVFAVELYPAGATRNSQDGVTQI 887 ++FAV+LYPAGAT NSQDGVT I Sbjct: 146 IIFAVKLYPAGATTNSQDGVTDI 168 Score = 37.0 bits (84), Expect(2) = 2e-06 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +2 Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949 TD+ G CLPVL+EMV+ MPLLV Sbjct: 166 TDIFGKCLPVLEEMVRQEMPLLV 188 >gb|ACG45127.1| dihydroorotase [Zea mays] gi|414880492|tpg|DAA57623.1| TPA: dihydroorotase isoform 1 [Zea mays] gi|414880493|tpg|DAA57624.1| TPA: dihydroorotase isoform 2 [Zea mays] Length = 401 Score = 42.0 bits (97), Expect(2) = 2e-06 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +3 Query: 819 VVFAVELYPAGATRNSQDGVTQI 887 ++FAV+LYPAGAT NSQDGVT I Sbjct: 145 IIFAVKLYPAGATTNSQDGVTDI 167 Score = 37.0 bits (84), Expect(2) = 2e-06 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +2 Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949 TD+ G CLPVL+EMV+ MPLLV Sbjct: 165 TDIFGKCLPVLEEMVRQEMPLLV 187 >ref|NP_001131817.1| uncharacterized protein LOC100193190 [Zea mays] gi|194692622|gb|ACF80395.1| unknown [Zea mays] Length = 401 Score = 42.0 bits (97), Expect(2) = 2e-06 Identities = 18/23 (78%), Positives = 21/23 (91%) Frame = +3 Query: 819 VVFAVELYPAGATRNSQDGVTQI 887 ++FAV+LYPAGAT NSQDGVT I Sbjct: 145 IIFAVKLYPAGATTNSQDGVTDI 167 Score = 37.0 bits (84), Expect(2) = 2e-06 Identities = 16/23 (69%), Positives = 19/23 (82%) Frame = +2 Query: 881 TDLIGSCLPVLKEMVK*NMPLLV 949 TD+ G CLPVL+EMV+ MPLLV Sbjct: 165 TDIFGKCLPVLEEMVRQEMPLLV 187