BLASTX nr result

ID: Coptis25_contig00022593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022593
         (633 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524389.1| protein binding protein, putative [Ricinus c...    69   9e-10

>ref|XP_002524389.1| protein binding protein, putative [Ricinus communis]
           gi|223536350|gb|EEF38000.1| protein binding protein,
           putative [Ricinus communis]
          Length = 665

 Score = 68.6 bits (166), Expect = 9e-10
 Identities = 67/232 (28%), Positives = 103/232 (44%), Gaps = 24/232 (10%)
 Frame = +3

Query: 6   PGL----PMQQPM-YFGISAPLSTGSNLXXXXXXXXXXXXTNMSAPNFSLWNMSSPNLTS 170
           PGL    P+QQPM Y   +APL TG+               N+  PN    N+  PNL +
Sbjct: 212 PGLSMPPPIQQPMQYSSYNAPLHTGA--------------PNLPGPNLPTSNLPVPNLPT 257

Query: 171 SNMSAPYFPASNMSASNFTASNIIAPSFHAFSSREYSPPVLPPFSGGSINLVSSALQSTV 350
           SN+ A   P +N+ ASN   +N++A +       + S P+L   S GS+NL S++   + 
Sbjct: 258 SNLPASNLPTTNLPASNLPTTNLLASNL-PVPLPDISSPLLSA-STGSLNLASTSSAPST 315

Query: 351 LPS---------QPAAVASDXXXXXXXXXXXXXXXXXXXXXAYLP-------SSLDIHAV 482
           LP+           A++AS+                       LP       S  +++ +
Sbjct: 316 LPATLPSTLPSVHSASLASETIPSLVPNKTPSSTLPAANLSPSLPALSPLTSSGPELNTI 375

Query: 483 THPTLETAPMLS---VPYQTKPHYVSPMLGTFNYSQSETSTTSLVTPGQLLQ 629
             P    +  +S   VPYQ+     + ++ + N  ++E  T SLVTPGQLLQ
Sbjct: 376 IPPLSNKSNAISGPTVPYQSIAQPTALVVPS-NSLRTEAPTPSLVTPGQLLQ 426


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