BLASTX nr result

ID: Coptis25_contig00022588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022588
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFW62165.1| hypothetical protein ZEAMMB73_094772 [Zea mays]        167   1e-39
dbj|BAJ94115.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   7e-39
dbj|BAJ94041.1| predicted protein [Hordeum vulgare subsp. vulgare]    164   7e-39
ref|XP_002514527.1| conserved hypothetical protein [Ricinus comm...   161   5e-38
gb|EEC83574.1| hypothetical protein OsI_29232 [Oryza sativa Indi...   160   8e-38

>gb|AFW62165.1| hypothetical protein ZEAMMB73_094772 [Zea mays]
          Length = 375

 Score =  167 bits (422), Expect = 1e-39
 Identities = 75/135 (55%), Positives = 98/135 (72%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 EETEAEDVCCWGTCKDTGIKELPFPQNKLLYVNYTTHSGQSTITERDKLCFIPVLEQPLS 225
           +E   ++ CCWGTC  + ++ELPFPQN++L V YT H G+S+ T  D + F+PV +QPL+
Sbjct: 37  DEGGDDETCCWGTCGGSRVRELPFPQNRVLTVRYTEHHGESSSTYADAVVFVPVPDQPLA 96

Query: 224 SNQYYVIRAEGKYKGQACTCSKEEDMSTCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYG 45
           SN+YY + A GK+KG    CS EEDM  CCFCRC+ DV PR FD  DIYQQV+I +RR G
Sbjct: 97  SNRYYPVIATGKHKGLVRACSTEEDMVQCCFCRCISDVDPRPFDPADIYQQVEIVQRRRG 156

Query: 44  YF-AKSIAPDGFPPF 3
            F A+++APDGFP F
Sbjct: 157 RFTARAVAPDGFPYF 171


>dbj|BAJ94115.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 370

 Score =  164 bits (415), Expect = 7e-39
 Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 EETEAEDVCCWGTCKDTGIKELPFPQNKLLYVNYTTHSGQSTITERDKLCFIPVLEQPLS 225
           E  + ++ CCWG C  T +++LPFPQ+++L + YT H GQS+ T  D + F+PV +QP++
Sbjct: 35  ENGDDDETCCWGQCGGTRVRDLPFPQDRVLTLRYTEHHGQSSTTYTDSVVFVPVPDQPVA 94

Query: 224 SNQYYVIRAEGKYKGQACTCSKEEDMSTCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYG 45
           SN+YY + A GK KG   TCS+EEDM+ CCFCRC+ DVKP+ FD  D+YQQ++I +RR G
Sbjct: 95  SNRYYAVVASGKRKGLVRTCSREEDMTPCCFCRCINDVKPQPFDPADLYQQIEIVQRRRG 154

Query: 44  YF-AKSIAPDGFPPF 3
            F AK++A DGFP +
Sbjct: 155 RFTAKAVAADGFPNY 169


>dbj|BAJ94041.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 371

 Score =  164 bits (415), Expect = 7e-39
 Identities = 70/135 (51%), Positives = 99/135 (73%), Gaps = 1/135 (0%)
 Frame = -2

Query: 404 EETEAEDVCCWGTCKDTGIKELPFPQNKLLYVNYTTHSGQSTITERDKLCFIPVLEQPLS 225
           E  + ++ CCWG C  T +++LPFPQ+++L + YT H GQS+ T  D + F+PV +QP++
Sbjct: 36  ENGDDDETCCWGQCGGTRVRDLPFPQDRVLTLRYTEHHGQSSTTYTDSVVFVPVPDQPVA 95

Query: 224 SNQYYVIRAEGKYKGQACTCSKEEDMSTCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYG 45
           SN+YY + A GK KG   TCS+EEDM+ CCFCRC+ DVKP+ FD  D+YQQ++I +RR G
Sbjct: 96  SNRYYAVVASGKRKGLVRTCSREEDMTPCCFCRCINDVKPQPFDPADLYQQIEIVQRRRG 155

Query: 44  YF-AKSIAPDGFPPF 3
            F AK++A DGFP +
Sbjct: 156 RFTAKAVAADGFPNY 170


>ref|XP_002514527.1| conserved hypothetical protein [Ricinus communis]
           gi|223546131|gb|EEF47633.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 389

 Score =  161 bits (408), Expect = 5e-38
 Identities = 74/134 (55%), Positives = 97/134 (72%), Gaps = 1/134 (0%)
 Frame = -2

Query: 404 EETEAEDVCCWGTCKDTGIKELPFPQNKLLYVNYTTHSGQSTITERDKLCFIPVLEQPLS 225
           ++ EAE  CC+G CK   + +LPFPQNK L V Y++ +GQ+     +++ FIPVL QP+S
Sbjct: 33  QDEEAEPTCCFGLCKSHQVDDLPFPQNKNLQVRYSSGAGQNQTVSINRVVFIPVLNQPVS 92

Query: 224 SNQYYVIRAEGKYKGQACTCSKEEDMSTCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYG 45
           SN+YY I   GK KG+A   SKEEDM+TCCFC CV D+KP++ DH DIYQQ +I +R +G
Sbjct: 93  SNRYYCIERRGKRKGEAHQNSKEEDMTTCCFCSCVSDLKPQSLDHHDIYQQFEIHRRNWG 152

Query: 44  YF-AKSIAPDGFPP 6
            F AKS+A DGFPP
Sbjct: 153 GFVAKSVASDGFPP 166


>gb|EEC83574.1| hypothetical protein OsI_29232 [Oryza sativa Indica Group]
          Length = 818

 Score =  160 bits (406), Expect = 8e-38
 Identities = 70/130 (53%), Positives = 95/130 (73%), Gaps = 1/130 (0%)
 Frame = -2

Query: 389 EDVCCWGTCKDTGIKELPFPQNKLLYVNYTTHSGQSTITERDKLCFIPVLEQPLSSNQYY 210
           ++ CCWGTC  + +++LPFPQN++L V YT   G+S+ T  D + F+PV + PL+SN+YY
Sbjct: 44  DETCCWGTCGGSRLRDLPFPQNRVLTVRYTEQHGESSTTHADAVVFVPVPDLPLASNRYY 103

Query: 209 VIRAEGKYKGQACTCSKEEDMSTCCFCRCVKDVKPRAFDHRDIYQQVQIFKRRYGYF-AK 33
            + A GK+KG    CS+EEDM+T CFCRC+ D KPR FD  D+YQQV+I +RR G F A+
Sbjct: 104 AVVAAGKHKGLVRACSREEDMTTLCFCRCINDAKPRVFDPADVYQQVEIVQRRRGRFTAR 163

Query: 32  SIAPDGFPPF 3
           S+A DGFP F
Sbjct: 164 SVAADGFPYF 173


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