BLASTX nr result
ID: Coptis25_contig00022583
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis25_contig00022583
(1761 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group] g... 75 2e-19
gb|EEC80741.1| hypothetical protein OsI_23219 [Oryza sativa Indi... 90 1e-18
ref|NP_001174494.1| Os05g0523100 [Oryza sativa Japonica Group] g... 88 4e-18
gb|AAV44036.1| hypothetical protein [Oryza sativa Japonica Group] 88 4e-18
gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa... 88 4e-18
>ref|NP_001059088.1| Os07g0190600 [Oryza sativa Japonica Group]
gi|34394551|dbj|BAC83855.1| DNA binding protein-like
[Oryza sativa Japonica Group]
gi|113610624|dbj|BAF21002.1| Os07g0190600 [Oryza sativa
Japonica Group]
Length = 544
Score = 74.7 bits (182), Expect(2) = 2e-19
Identities = 64/227 (28%), Positives = 114/227 (50%), Gaps = 6/227 (2%)
Frame = +2
Query: 353 IYTGVYYLNSTRATKIYYNLAIPELQHLMNSPKSKTIELLEGSASTDRISSTRQLK-NRK 529
+++G S+ ATK Y N+ IPE+ S + + E+L + + + + NRK
Sbjct: 215 LFSGAPSCRSSAATKWYINIDIPEINAFRTSLQGRGCEVLLVPSDGAALGAANEADANRK 274
Query: 530 TLSEILNSLDRDTIGHVLTCKASICEVIHDYEPYYLSCPKAGCRK--KKVLEKDDRYWCN 703
++SE+L+ D TC A I E+ +Y +C + CRK K L+ + C
Sbjct: 275 SISELLSLNPHDNNDVRFTCDARIKEIDVSSGWWYKAC--SICRKGVKPTLQG---FECV 329
Query: 704 SCNEFLPSPFTRYQIRARIQDHTNRSIVTIFGKEAETLVKHPASELEAMLKSASGSQMVK 883
+C+ P Y++ I+D+T+R+ + +FG AE +V+ A++L + +S++ ++
Sbjct: 330 NCDNTEPIITPSYKLNVVIEDNTDRAKIFMFGGMAEQVVRRTAADL--VEESSANQLLLP 387
Query: 884 NILNELIGSSLIFEIKINECNIKNQGTNGFITTKVF---PMDYKLEG 1015
+ L LIG +F+I I+E + G F KVF P+D + G
Sbjct: 388 SPLRALIGRRFVFQIVISEQTFRT-GQLCFQVRKVFNPPPIDGQNNG 433
Score = 48.9 bits (115), Expect(2) = 2e-19
Identities = 33/116 (28%), Positives = 58/116 (50%), Gaps = 6/116 (5%)
Frame = +1
Query: 13 VQHAFVILFK-WDMFVRLLSETAPEIPPYKFALPEFDNINSRYKQITNLTDVCGVLEGIS 189
V + I F W + + +E + +P Y F +F++++ R + L DV G L +
Sbjct: 91 VPSTYAIFFTPWTIVEEIPTEISGSLPLYIFNFVDFEDLDERARHPNGLVDVIGQLTVVH 150
Query: 190 AITVRKGMKQ---LRNIHLRNDSGKKMRITLW-ENAVDLVDKDIINST-VDQPVIV 342
+ G+ RN+ LR+ S + + ITLW E+A D+ +I + D+PVI+
Sbjct: 151 PLVQSNGLNGPSVRRNVELRDLSDRLLEITLWAEHATSFEDEFLIETIGKDEPVII 206
>gb|EEC80741.1| hypothetical protein OsI_23219 [Oryza sativa Indica Group]
Length = 667
Score = 89.7 bits (221), Expect(2) = 1e-18
Identities = 82/317 (25%), Positives = 144/317 (45%), Gaps = 21/317 (6%)
Frame = +2
Query: 383 TRATKIYYNLAIPELQHLMNSPKSKTI--ELLEGSASTDRISSTRQLKNRKTLSEI--LN 550
T +T+++ ++ IP +++ ++ + ++E AST + NRKTL EI L
Sbjct: 139 TSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 198
Query: 551 SLDRDTIGHVLTCKASICEVIHDYEPYYLSCPKAGCRKKKVLEKDDRYWCNSCNEFLPSP 730
+ + T KA I E I +Y+SC K C +K + + Y CNSC + +P
Sbjct: 199 YSNIQQKEFICTVKAKI-EEIKSRNWWYMSCDKCFCGTRK---ESNVYICNSCGKEAVNP 254
Query: 731 FTRYQIRARIQDHTNRSIVTIFGKEAETLVKHPASELEAMLKSASGS-QMVKNILNELIG 907
RY I I DHT R+ TIF +EAE + H + ML+ +G M+ + + ++ G
Sbjct: 255 KPRYVINLEISDHTTRTTCTIFNEEAERIFGH--KSVSTMLEEQNGQIDMIPDTIRQICG 312
Query: 908 SSLIFEIKINECNIKNQGTNGFITTKVFPMDYKLEGDMMLTHIDQMQAKVEIHTLNTIYQ 1087
LIF +K+ + N++ + + F + KLE + +++ +V+ N
Sbjct: 313 RILIFRLKLTKRNLE-ECKEDYKVNYTFTPNEKLE----MNYVNDKAEEVKEEPKNESSD 367
Query: 1088 D-PISEHPKILPFENSSEPPGTSTKE---------TNPKHMR---RKSECVEIY---SYN 1219
D ++ H K ++ S KE TN K + E ++ Y YN
Sbjct: 368 DYEMNNHRKTKKERSNMRSTKRSNKEPYITDSDGKTNEKAITIDDDSEESLDDYFDEEYN 427
Query: 1220 FKETVKTSATTVASKRI 1270
K T +++ T + +R+
Sbjct: 428 KKVTQESTKTNPSKRRV 444
Score = 31.6 bits (70), Expect(2) = 1e-18
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +1
Query: 160 DVCGVLEGISAI--------TVRKGMKQLRNIHLRNDSGKKMRITLWENAV-DLVDKDII 312
DV G+L G+ I T R+ + +R I L G+K++ITLW + + ++VD D++
Sbjct: 55 DVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLL 114
>ref|NP_001174494.1| Os05g0523100 [Oryza sativa Japonica Group]
gi|255676500|dbj|BAH93222.1| Os05g0523100 [Oryza sativa
Japonica Group]
Length = 1068
Score = 87.8 bits (216), Expect(2) = 4e-18
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 383 TRATKIYYNLAIPELQHLMNSPKSKTI--ELLEGSASTDRISSTRQLKNRKTLSEI--LN 550
T +T+++ ++ IP +++ ++ + ++E AST + NRKTL EI L
Sbjct: 445 TSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 504
Query: 551 SLDRDTIGHVLTCKASICEVIHDYEPYYLSCPKAGCRKKKVLEKDDRYWCNSCNEFLPSP 730
+ + T KA I E I +Y+SC K C +K + + Y CNSC + +P
Sbjct: 505 YSNIQQKEFICTVKAKI-EEIKSRNWWYMSCDKCFCGTRK---ESNVYICNSCGKEAVNP 560
Query: 731 FTRYQIRARIQDHTNRSIVTIFGKEAETLVKHPASELEAMLKSASGS-QMVKNILNELIG 907
RY I I DHT R+ TIF +EAE + H + ML+ +G M+ + + ++ G
Sbjct: 561 KPRYVINLEISDHTTRTTCTIFNEEAERIFGH--KSVSTMLEEQNGQIDMIPDTIRQICG 618
Query: 908 SSLIFEIKINECNIK 952
LIF +K+ + N++
Sbjct: 619 RILIFRLKLTKRNLE 633
Score = 31.6 bits (70), Expect(2) = 4e-18
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +1
Query: 160 DVCGVLEGISAI--------TVRKGMKQLRNIHLRNDSGKKMRITLWENAV-DLVDKDII 312
DV G+L G+ I T R+ + +R I L G+K++ITLW + + ++VD D++
Sbjct: 361 DVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLL 420
>gb|AAV44036.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 820
Score = 87.8 bits (216), Expect(2) = 4e-18
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 383 TRATKIYYNLAIPELQHLMNSPKSKTI--ELLEGSASTDRISSTRQLKNRKTLSEI--LN 550
T +T+++ ++ IP +++ ++ + ++E AST + NRKTL EI L
Sbjct: 197 TSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 256
Query: 551 SLDRDTIGHVLTCKASICEVIHDYEPYYLSCPKAGCRKKKVLEKDDRYWCNSCNEFLPSP 730
+ + T KA I E I +Y+SC K C +K + + Y CNSC + +P
Sbjct: 257 YSNIQQKEFICTVKAKI-EEIKSRNWWYMSCDKCFCGTRK---ESNVYICNSCGKEAVNP 312
Query: 731 FTRYQIRARIQDHTNRSIVTIFGKEAETLVKHPASELEAMLKSASGS-QMVKNILNELIG 907
RY I I DHT R+ TIF +EAE + H + ML+ +G M+ + + ++ G
Sbjct: 313 KPRYVINLEISDHTTRTTCTIFNEEAERIFGH--KSVSTMLEEQNGQIDMIPDTIRQICG 370
Query: 908 SSLIFEIKINECNIK 952
LIF +K+ + N++
Sbjct: 371 RILIFRLKLTKRNLE 385
Score = 31.6 bits (70), Expect(2) = 4e-18
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +1
Query: 160 DVCGVLEGISAI--------TVRKGMKQLRNIHLRNDSGKKMRITLWENAV-DLVDKDII 312
DV G+L G+ I T R+ + +R I L G+K++ITLW + + ++VD D++
Sbjct: 113 DVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLL 172
>gb|ABA94946.1| hypothetical protein LOC_Os11g41180 [Oryza sativa Japonica Group]
Length = 800
Score = 87.8 bits (216), Expect(2) = 4e-18
Identities = 59/195 (30%), Positives = 99/195 (50%), Gaps = 5/195 (2%)
Frame = +2
Query: 383 TRATKIYYNLAIPELQHLMNSPKSKTI--ELLEGSASTDRISSTRQLKNRKTLSEI--LN 550
T +T+++ ++ IP +++ ++ + ++E AST + NRKTL EI L
Sbjct: 197 TSSTEVFLDMEIPASMEILSRHNAEKVLPTMIEVDASTQGTIEEQMFYNRKTLKEITELR 256
Query: 551 SLDRDTIGHVLTCKASICEVIHDYEPYYLSCPKAGCRKKKVLEKDDRYWCNSCNEFLPSP 730
+ + T KA I E I +Y+SC K C +K + + Y CNSC + +P
Sbjct: 257 YSNIQQKEFICTVKAKI-EEIKSRNWWYMSCDKCFCGTRK---ESNVYICNSCGKEAVNP 312
Query: 731 FTRYQIRARIQDHTNRSIVTIFGKEAETLVKHPASELEAMLKSASGS-QMVKNILNELIG 907
RY I I DHT R+ TIF +EAE + H + ML+ +G M+ + + ++ G
Sbjct: 313 KPRYVINLEISDHTTRTTCTIFNEEAERIFGH--KSVSTMLEEQNGQIDMIPDTIRQICG 370
Query: 908 SSLIFEIKINECNIK 952
LIF +K+ + N++
Sbjct: 371 RILIFRLKLTKRNLE 385
Score = 31.6 bits (70), Expect(2) = 4e-18
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 9/60 (15%)
Frame = +1
Query: 160 DVCGVLEGISAI--------TVRKGMKQLRNIHLRNDSGKKMRITLWENAV-DLVDKDII 312
DV G+L G+ I T R+ + +R I L G+K++ITLW + + ++VD D++
Sbjct: 113 DVIGLLSGMKPIEQRMLGKNTSRERVCNMREIELLLLEGEKVKITLWGDILANMVDDDLL 172