BLASTX nr result

ID: Coptis25_contig00022567 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022567
         (940 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]   199   1e-48
ref|XP_002510598.1| conserved hypothetical protein [Ricinus comm...   181   3e-43
ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|2...   179   6e-43
ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070...   166   7e-39
ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago...   166   1e-38

>emb|CAN83887.1| hypothetical protein VITISV_001638 [Vitis vinifera]
          Length = 245

 Score =  199 bits (505), Expect = 1e-48
 Identities = 126/248 (50%), Positives = 151/248 (60%), Gaps = 20/248 (8%)
 Frame = +2

Query: 161 MEKTTKSKNKIFSFLPKTASV-SFHNP-PFSPGRDKR--TENLNKVKANNGGKGFSGPLR 328
           MEK  KSKN I  FLPK ASV +F N  PFSPGRD +  +++ NK KA+  G+GFSGP+ 
Sbjct: 1   MEKPAKSKNMILKFLPKAASVINFQNSTPFSPGRDHKRSSDSTNKFKAHGAGRGFSGPMI 60

Query: 329 PPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXX 508
             MIPVEA  +S+SG  FD QEPTSPK+SCMGQ+K K K     +K  +           
Sbjct: 61  S-MIPVEAHWRSRSGN-FDRQEPTSPKVSCMGQVKDKHKKRIPKTKRASPPKESKPREMK 118

Query: 509 XXXXXLRNIFSSAAKPGRKSDASAK-KPPLPDRAPSLCQMKQFTSGRDALADFDW----- 670
                LR IF S+   GRKSDAS+  KP LPDRAPSL QMK+F+SGR+A ++FDW     
Sbjct: 119 KQHSTLRRIFRSS-NSGRKSDASSDDKPSLPDRAPSLGQMKRFSSGRNAFSNFDWTAPVA 177

Query: 671 -------KYY---XXXXXXXXXXXVFIAHSAPILIGSGGVGRVALEPRKEINLWKRRTMN 820
                   YY                I  SAPIL+G    G VALEPRKEINLWKRRT+ 
Sbjct: 178 PVDSDHRSYYSDEERGDFEEEDEEFIIPFSAPILVG----GAVALEPRKEINLWKRRTLV 233

Query: 821 PPKPLQLN 844
           PP+PL+LN
Sbjct: 234 PPRPLRLN 241


>ref|XP_002510598.1| conserved hypothetical protein [Ricinus communis]
           gi|223551299|gb|EEF52785.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 275

 Score =  181 bits (458), Expect = 3e-43
 Identities = 122/269 (45%), Positives = 151/269 (56%), Gaps = 42/269 (15%)
 Frame = +2

Query: 164 EKTTKSKNKIFSFLPKTAS-VSFHNPPFSPGRDKRTENL-----NKVKANNGGKGFSGPL 325
           ++  K KNKI  FLPK AS VSF NPPFSPGRDKR         N+VK++ G KG+SGP+
Sbjct: 6   QQAAKPKNKILKFLPKAASAVSFQNPPFSPGRDKRIPEYHQHFHNRVKSHVG-KGYSGPI 64

Query: 326 RPPMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSK----------PIT 475
              +IP EAR ++    +F+  EPTSPKISCMGQIKHKKK  ++ SK            +
Sbjct: 65  -VSIIPDEARRRTSKNGSFENHEPTSPKISCMGQIKHKKKIINSSSKNKAKNQETEPEKS 123

Query: 476 XXXXXXXXXXXXXXXXLRNIFSSAAK----PGRKSDASA-KKPPLPD---RAPSLCQMKQ 631
                           ++ +FS+A K      R+SDAS   KPPL D   RAP+L Q+K+
Sbjct: 124 TSTSTPRREIKKHALTIKRMFSNAVKVPEHGRRRSDASMYDKPPLTDTSHRAPALSQLKR 183

Query: 632 FTSGRDALADFDW------------KYY------XXXXXXXXXXXVFIAHSAPILIGSGG 757
           F SGRD  A+FDW             YY                 V I  SAPI++G  G
Sbjct: 184 FASGRDTFANFDWTSQVVPAESDHRNYYSDDEEEERHSDHDYDEDVIIPFSAPIIVGP-G 242

Query: 758 VGRVALEPRKEINLWKRRTMNPPKPLQLN 844
           VG   L+PRKE+NLW+RRTMNPPKPLQLN
Sbjct: 243 VGN--LQPRKEVNLWRRRTMNPPKPLQLN 269


>ref|XP_002301948.1| predicted protein [Populus trichocarpa] gi|222843674|gb|EEE81221.1|
           predicted protein [Populus trichocarpa]
          Length = 253

 Score =  179 bits (455), Expect = 6e-43
 Identities = 121/253 (47%), Positives = 146/253 (57%), Gaps = 26/253 (10%)
 Frame = +2

Query: 161 MEKTTKSK-NKIFSFLPKTAS-VSFHNPPFSPGRDKRTENLNKVKANNGGKGFSGPLRPP 334
           MEK   +  N+I  FLPK AS V+FHN  FSPGRD+R+E ++K KAN G KGF+ P R  
Sbjct: 1   MEKQAAAPPNRILKFLPKAASAVNFHNLAFSPGRDRRSEIIHKHKANVG-KGFN-PCRS- 57

Query: 335 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPI-----TXXXXXXXX 499
           MIPVE R + K+      +EPTSPKISCMGQIKHKKK N A  K +     T        
Sbjct: 58  MIPVEVRRQPKNESFETQEEPTSPKISCMGQIKHKKKMNKATYKRVSLPQETKPASQTQR 117

Query: 500 XXXXXXXXLRNIFSSAAKPGRKSDA-SAKKPPLPDRAPSLCQMKQFTSGRDALADFDW-- 670
                   L+ +F + +K GRKS+A    KP LPDRAPSL QMK+F SGRD LA FDW  
Sbjct: 118 QVMKHASKLKRLF-TGSKAGRKSNAFDGGKPTLPDRAPSLSQMKRFASGRDTLASFDWTA 176

Query: 671 -----------KYY-----XXXXXXXXXXXVFIAHSAPILIGSGGVGRVALEPRKEINLW 802
                       YY                V I  SAP+++G G    V L PRKE+NLW
Sbjct: 177 HQIAPVEPVGRDYYSDEERGDSFEDQEDEEVIIPFSAPMVLGGG----VDLLPRKEVNLW 232

Query: 803 KRRTMNPPKPLQL 841
           KRRTM+PP+PL+L
Sbjct: 233 KRRTMDPPEPLRL 245


>ref|XP_003545011.1| PREDICTED: uncharacterized protein At1g76070-like [Glycine max]
          Length = 246

 Score =  166 bits (420), Expect = 7e-39
 Identities = 105/246 (42%), Positives = 127/246 (51%), Gaps = 19/246 (7%)
 Frame = +2

Query: 164 EKTTKSKNKIFSFLPKTA----SVSFHNPPFSPGRDKRTENLNKVKANNGGKGFSGPLRP 331
           EK +K KNKIF  LPK A    S++F NPPFSPGRD + ++       +GGKGF      
Sbjct: 6   EKESKLKNKIFKILPKAAAAAVSMTFQNPPFSPGRDHKFKH-------HGGKGF---FSG 55

Query: 332 PMIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXX 511
           PMIPVEAR KSK G   + QEPTSPKISCMGQIKHKKK N       T            
Sbjct: 56  PMIPVEARRKSKDG-CVETQEPTSPKISCMGQIKHKKKKNQIKKAAKTMSMPTEEKKQAS 114

Query: 512 XXXXLRNIFSSAAK--PGRKSDASAKKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 673
               + +  S   K    RK  + A        AP L  M++F SGR+  ++FDWK    
Sbjct: 115 KFQRMMSFHSGKPKRPAARKQQSDADLESERSPAPPLGHMRRFASGRETFSNFDWKAQIA 174

Query: 674 --------YYXXXXXXXXXXXVFIAHSAPILIGSGGVG-RVALEPRKEINLWKRRTMNPP 826
                   YY           + I  SAP+ +G       +  +PRKEINLWKRRTM PP
Sbjct: 175 PEERDCYSYYDDRLESDAEDEIIIPFSAPLTVGGAASALNLNAQPRKEINLWKRRTMAPP 234

Query: 827 KPLQLN 844
           +PLQLN
Sbjct: 235 RPLQLN 240


>ref|XP_003603835.1| Syringolide-induced protein 14-1-1 [Medicago truncatula]
           gi|355492883|gb|AES74086.1| Syringolide-induced protein
           14-1-1 [Medicago truncatula]
          Length = 245

 Score =  166 bits (419), Expect = 1e-38
 Identities = 113/252 (44%), Positives = 138/252 (54%), Gaps = 24/252 (9%)
 Frame = +2

Query: 161 MEKTTKSKNKIFSFLPKTASVSFHNPPFSPGRD--KRTENLNKVKANNGGKGFSGPLRPP 334
           MEK  K +NKI   LPKT +++F N PFSPGRD   R +N  K    +G KGFSGP++  
Sbjct: 1   MEKNLKLRNKILKILPKTITINFQNHPFSPGRDHKSRQDNATKWARPHGVKGFSGPIQS- 59

Query: 335 MIPVEARMKSKSGRTFDAQEPTSPKISCMGQIKHKKKTNDAVSKPITXXXXXXXXXXXXX 514
           +IP EAR KSK     D +EPTSPKISCMGQIKHKKK     SK +              
Sbjct: 60  IIPREARRKSKDINGIDYEEPTSPKISCMGQIKHKKKQIKK-SKDMEVKKHVNTFQKM-- 116

Query: 515 XXXLRNIFSSAAKPGRKSDASA---KKPPLPDRAPSLCQMKQFTSGRDALADFDWK---- 673
              L ++    ++  RKSDA A   KK  + +RA  + QMK+F SGRD  A+FDWK    
Sbjct: 117 ---LFHVGKPKSEGRRKSDACAVQDKKYAIEERATHVSQMKRFASGRDTFANFDWKAQVA 173

Query: 674 ------YYXXXXXXXXXXX-----VFIAHSAPILIGSGGVGRVAL----EPRKEINLWKR 808
                 YY                  I  SAP+    GGVG  +L    +PRKEINLWKR
Sbjct: 174 PEEIDNYYSDEERMQSDDDDDEEEFKIPFSAPL---GGGVGACSLGLDLKPRKEINLWKR 230

Query: 809 RTMNPPKPLQLN 844
           RTM PP+PLQL+
Sbjct: 231 RTMAPPRPLQLD 242


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