BLASTX nr result

ID: Coptis25_contig00022558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022558
         (259 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511273.1| conserved hypothetical protein [Ricinus comm...    60   2e-07
ref|XP_002875899.1| hypothetical protein ARALYDRAFT_485198 [Arab...    60   2e-07
ref|NP_974402.1| putative Ufm1-specific protease [Arabidopsis th...    59   3e-07
ref|NP_680114.1| putative Ufm1-specific protease [Arabidopsis th...    59   3e-07
ref|NP_001190032.1| putative Ufm1-specific protease [Arabidopsis...    59   3e-07

>ref|XP_002511273.1| conserved hypothetical protein [Ricinus communis]
           gi|223550388|gb|EEF51875.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 650

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 31/47 (65%), Positives = 38/47 (80%), Gaps = 1/47 (2%)
 Frame = +1

Query: 115 VRVLCKKLILITNKEEEESIQWLIGSPFFPQFTILSTFKCLH-FQSS 252
           +RVLC KL LIT KE    +QWLIGSPFFP FTI+STF+C+H F++S
Sbjct: 8   IRVLCPKL-LITRKEA--GLQWLIGSPFFPPFTIVSTFRCIHTFENS 51


>ref|XP_002875899.1| hypothetical protein ARALYDRAFT_485198 [Arabidopsis lyrata subsp.
           lyrata] gi|297321737|gb|EFH52158.1| hypothetical protein
           ARALYDRAFT_485198 [Arabidopsis lyrata subsp. lyrata]
          Length = 641

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 26/42 (61%), Positives = 35/42 (83%)
 Frame = +1

Query: 115 VRVLCKKLILITNKEEEESIQWLIGSPFFPQFTILSTFKCLH 240
           VRVLC+KL+L  N  +  ++QWLIGSPFFP FT++STF+C+H
Sbjct: 10  VRVLCQKLLLSGN--QPGTLQWLIGSPFFPPFTVVSTFRCIH 49


>ref|NP_974402.1| putative Ufm1-specific protease [Arabidopsis thaliana]
           gi|332644888|gb|AEE78409.1| putative Ufm1-specific
           protease [Arabidopsis thaliana]
          Length = 640

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 115 VRVLCKKLILITNKEEEESIQWLIGSPFFPQFTILSTFKCLH 240
           VRVLC+KL+L  N     ++QWLIGSPFFP FT++STF+C+H
Sbjct: 10  VRVLCQKLLLSPN--HPGTLQWLIGSPFFPPFTVVSTFRCIH 49


>ref|NP_680114.1| putative Ufm1-specific protease [Arabidopsis thaliana]
           gi|134035353|sp|Q9STL8.2|UFSP_ARATH RecName:
           Full=Probable Ufm1-specific protease; Short=UfSP
           gi|332644887|gb|AEE78408.1| putative Ufm1-specific
           protease [Arabidopsis thaliana]
          Length = 645

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 115 VRVLCKKLILITNKEEEESIQWLIGSPFFPQFTILSTFKCLH 240
           VRVLC+KL+L  N     ++QWLIGSPFFP FT++STF+C+H
Sbjct: 10  VRVLCQKLLLSPN--HPGTLQWLIGSPFFPPFTVVSTFRCIH 49


>ref|NP_001190032.1| putative Ufm1-specific protease [Arabidopsis thaliana]
           gi|332644889|gb|AEE78410.1| putative Ufm1-specific
           protease [Arabidopsis thaliana]
          Length = 653

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 26/42 (61%), Positives = 34/42 (80%)
 Frame = +1

Query: 115 VRVLCKKLILITNKEEEESIQWLIGSPFFPQFTILSTFKCLH 240
           VRVLC+KL+L  N     ++QWLIGSPFFP FT++STF+C+H
Sbjct: 10  VRVLCQKLLLSPN--HPGTLQWLIGSPFFPPFTVVSTFRCIH 49


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