BLASTX nr result

ID: Coptis25_contig00022543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022543
         (399 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [M...    97   1e-18
ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|...    94   1e-17
emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]    93   2e-17
emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]    92   3e-17
ref|XP_003621710.1| Receptor-like protein kinase [Medicago trunc...    91   8e-17

>emb|CBL94154.1| putative polyprotein (retrotrasposon protein) [Malus x domestica]
          Length = 1390

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = +3

Query: 138 NKKRLMRWHIRLGHVSFSYLKYLVPSLFQQVSF*ELSCEVCHLSKHTRAVYPPSINKIAN 317
           N + +   H RLGH SF YL++L+PSLF  ++  +L CEVC L+K  RA +PPS+NK A 
Sbjct: 450 NLQEVWLLHRRLGHASFGYLRHLLPSLFSGINESDLHCEVCILAKSHRASFPPSMNKRA- 508

Query: 318 SPFDLVHSDVWGPSPVPSNLGFRYFV 395
            PF+LVHSDVWGPSP+  + G R+FV
Sbjct: 509 LPFELVHSDVWGPSPIVPSSGIRWFV 534


>ref|XP_003597218.1| Beta-galactosidase [Medicago truncatula] gi|355486266|gb|AES67469.1|
            Beta-galactosidase [Medicago truncatula]
          Length = 2260

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 43/86 (50%), Positives = 58/86 (67%)
 Frame = +3

Query: 138  NKKRLMRWHIRLGHVSFSYLKYLVPSLFQQVSF*ELSCEVCHLSKHTRAVYPPSINKIAN 317
            N + + +WH RLGH SFSYLK L PSLF +    +  CE C ++K  R  +P + N  A+
Sbjct: 960  NIEDIWQWHKRLGHPSFSYLKRLFPSLFSRCDISDFKCETCVMAKSHRVSFPIN-NSRAD 1018

Query: 318  SPFDLVHSDVWGPSPVPSNLGFRYFV 395
            +PF ++HSDVWGPSP P+N G R+FV
Sbjct: 1019 APFSIIHSDVWGPSPFPTNNGMRWFV 1044


>emb|CAN84036.1| hypothetical protein VITISV_024166 [Vitis vinifera]
          Length = 1337

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 44/86 (51%), Positives = 57/86 (66%)
 Frame = +3

Query: 138 NKKRLMRWHIRLGHVSFSYLKYLVPSLFQQVSF*ELSCEVCHLSKHTRAVYPPSINKIAN 317
           NK  +  +H+RLGH SF  LK + P LFQ +   E  CE C L+KHTR VY P  NK ++
Sbjct: 425 NKDTIWLYHLRLGHPSFRVLKVMFPHLFQGLDISEFHCETCELAKHTR-VYFPISNKRSS 483

Query: 318 SPFDLVHSDVWGPSPVPSNLGFRYFV 395
            PF L+HSD+WGPS +P+  G R+FV
Sbjct: 484 HPFHLIHSDIWGPSTIPNVSGARWFV 509


>emb|CAN73765.1| hypothetical protein VITISV_035279 [Vitis vinifera]
          Length = 2260

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 44/87 (50%), Positives = 56/87 (64%)
 Frame = +3

Query: 138 NKKRLMRWHIRLGHVSFSYLKYLVPSLFQQVSF*ELSCEVCHLSKHTRAVYPPSINKIAN 317
           NK  ++ WH RLGH SF YLK + P LF  +S  +  CE C L+K  R  YP S NK + 
Sbjct: 421 NKXNILLWHRRLGHPSFGYLKLVFPXLFSGLSNLDFKCETCILAKSHRVSYPLSFNK-SQ 479

Query: 318 SPFDLVHSDVWGPSPVPSNLGFRYFVL 398
            PF+L+HSDVWGPSP  +  G R+FV+
Sbjct: 480 MPFELIHSDVWGPSPKSTISGVRWFVI 506


>ref|XP_003621710.1| Receptor-like protein kinase [Medicago truncatula]
           gi|355496725|gb|AES77928.1| Receptor-like protein kinase
           [Medicago truncatula]
          Length = 1085

 Score = 91.3 bits (225), Expect = 8e-17
 Identities = 46/78 (58%), Positives = 52/78 (66%)
 Frame = +3

Query: 162 HIRLGHVSFSYLKYLVPSLFQQVSF*ELSCEVCHLSKHTRAVYPPSINKIANSPFDLVHS 341
           H RLGH SF  LK LVP L    S   L CE C L KH RA +P S NK + SPFD+VHS
Sbjct: 157 HRRLGHPSFDKLKVLVPQLSHLKS---LDCESCQLGKHVRASFPSSPNKRSKSPFDIVHS 213

Query: 342 DVWGPSPVPSNLGFRYFV 395
           DVWGPS V S LG++Y+V
Sbjct: 214 DVWGPSRVMSTLGYKYYV 231


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