BLASTX nr result

ID: Coptis25_contig00022525 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022525
         (752 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521261.1| conserved hypothetical protein [Ricinus comm...   149   6e-34
ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cuc...   144   2e-32
ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Gly...   143   4e-32
gb|AFK46232.1| unknown [Medicago truncatula]                          139   6e-31
gb|AFK40444.1| unknown [Lotus japonicus]                              139   6e-31

>ref|XP_002521261.1| conserved hypothetical protein [Ricinus communis]
           gi|223539529|gb|EEF41117.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 124

 Score =  149 bits (376), Expect = 6e-34
 Identities = 71/100 (71%), Positives = 78/100 (78%)
 Frame = -1

Query: 581 LPPHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAXXXXXXXXXXXXXXXXESPPSMYPA 402
           LP HLSFKKIQMYEKYPKGQARGRHWKHLKQILQA                ESPPSM+P 
Sbjct: 12  LPTHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAENYQNYPPDEPNYVNIESPPSMHPC 71

Query: 401 KKYCDLTGFEAPYVDPKTKLRYANADVFRQLRSLPNDYVQ 282
           K+ CD+TGFEAPY DP+T LRYA+ADVF+ +RSLPNDYVQ
Sbjct: 72  KRICDITGFEAPYSDPRTNLRYASADVFKLVRSLPNDYVQ 111


>ref|XP_004152811.1| PREDICTED: INO80 complex subunit C-like [Cucumis sativus]
           gi|449521619|ref|XP_004167827.1| PREDICTED: INO80
           complex subunit C-like [Cucumis sativus]
          Length = 124

 Score =  144 bits (363), Expect = 2e-32
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = -1

Query: 581 LPPHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAXXXXXXXXXXXXXXXXESPPSMYPA 402
           LP HL+FK+IQMYEKYPKGQ+RGRHWKHLKQILQA                ESPPSM+P 
Sbjct: 12  LPIHLNFKRIQMYEKYPKGQSRGRHWKHLKQILQAENYHNYSPDEPNYVNIESPPSMHPC 71

Query: 401 KKYCDLTGFEAPYVDPKTKLRYANADVFRQLRSLPNDYVQ 282
           K+ CD+TG+EAPY DP+T LRYANAD+F+ +RSLPN+YVQ
Sbjct: 72  KRICDITGYEAPYYDPRTTLRYANADIFKVIRSLPNEYVQ 111


>ref|XP_003539116.1| PREDICTED: INO80 complex subunit C-like [Glycine max]
          Length = 178

 Score =  143 bits (360), Expect = 4e-32
 Identities = 66/100 (66%), Positives = 78/100 (78%)
 Frame = -1

Query: 581 LPPHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAXXXXXXXXXXXXXXXXESPPSMYPA 402
           LP +LSFK++QMYEKYPKGQARGRHWKHLKQI+QA                ESPPSM+P 
Sbjct: 66  LPSYLSFKRVQMYEKYPKGQARGRHWKHLKQIIQAENYQNYPPDEPNYANIESPPSMHPC 125

Query: 401 KKYCDLTGFEAPYVDPKTKLRYANADVFRQLRSLPNDYVQ 282
           K+ CD+TGFEAPY DP+T LRYANA+VF+ +RSLPN+YVQ
Sbjct: 126 KRICDITGFEAPYHDPRTNLRYANAEVFKIIRSLPNEYVQ 165


>gb|AFK46232.1| unknown [Medicago truncatula]
          Length = 129

 Score =  139 bits (350), Expect = 6e-31
 Identities = 64/100 (64%), Positives = 76/100 (76%)
 Frame = -1

Query: 581 LPPHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAXXXXXXXXXXXXXXXXESPPSMYPA 402
           LP +LSFK+IQMY+KYPKGQ+RGRHWKHLKQI+QA                ESPPSM+P 
Sbjct: 17  LPNYLSFKRIQMYDKYPKGQSRGRHWKHLKQIIQAENYQNYPPDEPNYVNIESPPSMHPC 76

Query: 401 KKYCDLTGFEAPYVDPKTKLRYANADVFRQLRSLPNDYVQ 282
           K+ CD+TG+EAPY DPKT LRYAN DVF+ +RSLPN+ VQ
Sbjct: 77  KRICDITGYEAPYYDPKTNLRYANTDVFKMIRSLPNESVQ 116


>gb|AFK40444.1| unknown [Lotus japonicus]
          Length = 124

 Score =  139 bits (350), Expect = 6e-31
 Identities = 63/100 (63%), Positives = 77/100 (77%)
 Frame = -1

Query: 581 LPPHLSFKKIQMYEKYPKGQARGRHWKHLKQILQAXXXXXXXXXXXXXXXXESPPSMYPA 402
           LP +LSFK++QM+EKYPKGQ+RGRHWKHLKQI+QA                ESPPSM+P 
Sbjct: 12  LPNYLSFKRVQMHEKYPKGQSRGRHWKHLKQIIQAENYQNYPPDQPNYVNIESPPSMHPC 71

Query: 401 KKYCDLTGFEAPYVDPKTKLRYANADVFRQLRSLPNDYVQ 282
           K+ CD+TG+EAPY DP+T LRYAN DVF+ +R+LPNDYVQ
Sbjct: 72  KRICDITGYEAPYYDPRTTLRYANTDVFKIIRALPNDYVQ 111


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