BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022511
         (948 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein no...   234   2e-85
ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic...   221   9e-83
ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arab...   226   5e-81
ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana] ...   224   4e-80
ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein no...   202   2e-75

>ref|XP_002285458.1| PREDICTED: rab3 GTPase-activating protein non-catalytic subunit
           [Vitis vinifera] gi|302142895|emb|CBI20190.3| unnamed
           protein product [Vitis vinifera]
          Length = 457

 Score =  234 bits (597), Expect(2) = 2e-85
 Identities = 122/223 (54%), Positives = 166/223 (74%), Gaps = 14/223 (6%)
 Frame = +1

Query: 61  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 240
           MAR+ + TE+G I C EL+E GAGK E WL+ENP+L+ +L T S ALANRS +L++ + E
Sbjct: 1   MARRVYTTELGCIACNELSELGAGK-EAWLVENPSLICALDTDSLALANRSFVLVLGWSE 59

Query: 241 N----HVIKKIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQI 405
           N    +   KI+P L+ IE E ITA+EW+VFD+ RV+ +GTS+GYL+ YSL  DLIHKQ+
Sbjct: 60  NGDPYNSPVKIRPTLSQIETERITAVEWLVFDEIRVLAVGTSSGYLMIYSLGADLIHKQM 119

Query: 406 VHPGNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLV 585
           ++PG I + RVRG K + ++    S++EEVCVVMPGVIARFDG+D++S++QRWF+++H  
Sbjct: 120 INPGRILKFRVRGTKRDLTQG---SSSEEVCVVMPGVIARFDGADLQSMLQRWFQDTHSQ 176

Query: 586 L---RLKKRE------DYGRLPHQLWNVSKYGSCSDAAITGIM 687
               + K+R+       YGRLP+QLWNVSKYG C+DAAITG M
Sbjct: 177 FWDEKPKRRDQEDSEKSYGRLPYQLWNVSKYGPCADAAITGTM 219



 Score =  108 bits (271), Expect(2) = 2e-85
 Identities = 55/74 (74%), Positives = 65/74 (87%), Gaps = 1/74 (1%)
 Frame = +3

Query: 729 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 908
           QSS+ YYCAVTIG+DAVISA+RLSE+RNRS+VGAILSKVVPA FST++S SKMIWRSE+ 
Sbjct: 227 QSSQRYYCAVTIGDDAVISAFRLSEDRNRSLVGAILSKVVPATFSTIASFSKMIWRSEQK 286

Query: 909 SSNK-EVKPQTFAK 947
           S  + E KPQ FA+
Sbjct: 287 SPKRSEPKPQPFAR 300


>ref|XP_002524520.1| rab3 gtpase-activating protein non-catalytic subunit, putative
           [Ricinus communis] gi|223536194|gb|EEF37847.1| rab3
           gtpase-activating protein non-catalytic subunit,
           putative [Ricinus communis]
          Length = 484

 Score =  221 bits (563), Expect(2) = 9e-83
 Identities = 114/217 (52%), Positives = 158/217 (72%), Gaps = 9/217 (4%)
 Frame = +1

Query: 64  ARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHEN 243
           ++++H TE+G I C EL++ GAGK E WL++NPNL  +L THS A++NR LILI  + + 
Sbjct: 3   SKRSHTTELGCIACEELSDVGAGK-EGWLVDNPNLKCALDTHSIAISNRYLILITGWDDG 61

Query: 244 HVIKKIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHPGN 420
             +K I+P L+ IE E ITA+EW+VFD+ RV+ +GTS GY L YSLDG LIHKQ+V+PG 
Sbjct: 62  PRLK-IRPDLSPIESESITALEWLVFDEIRVVAVGTSCGYFLVYSLDGHLIHKQMVYPGR 120

Query: 421 IRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVLRLKK 600
           I ++RVRG K + ++    S++EE+ +VMPGVIARFDGSD+++++Q W +E H     +K
Sbjct: 121 ILKIRVRGTKKDLTQ--QTSSSEEISIVMPGVIARFDGSDLQNMLQEWIQEKHSQFWDEK 178

Query: 601 RE--------DYGRLPHQLWNVSKYGSCSDAAITGIM 687
                      Y RLP+QLWNV+KYGSC+DAAITG+M
Sbjct: 179 PNRDADGLGITYKRLPYQLWNVNKYGSCADAAITGVM 215



 Score =  113 bits (282), Expect(2) = 9e-83
 Identities = 57/74 (77%), Positives = 67/74 (90%), Gaps = 1/74 (1%)
 Frame = +3

Query: 729 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 908
           QSS+ YYCAVTIG+DAVISAYRLSE+R++S+VGAILSKVVPA FST++S+SKMIWRSEK 
Sbjct: 223 QSSQRYYCAVTIGDDAVISAYRLSEDRSKSLVGAILSKVVPATFSTIASLSKMIWRSEKA 282

Query: 909 SSNK-EVKPQTFAK 947
           S  K E KPQ+FAK
Sbjct: 283 SPKKSEAKPQSFAK 296


>ref|XP_002882901.1| hypothetical protein ARALYDRAFT_478912 [Arabidopsis lyrata subsp.
           lyrata] gi|297328741|gb|EFH59160.1| hypothetical protein
           ARALYDRAFT_478912 [Arabidopsis lyrata subsp. lyrata]
          Length = 455

 Score =  226 bits (576), Expect(2) = 5e-81
 Identities = 119/220 (54%), Positives = 162/220 (73%), Gaps = 11/220 (5%)
 Frame = +1

Query: 61  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 240
           MA++ HLTE+G I C EL+E GAGK E WL+ NPNLL++L +HS ALANR LILI+N+ +
Sbjct: 1   MAKRIHLTELGCIACEELSELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 241 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHP 414
               + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIHKQ+VHP
Sbjct: 60  PDAPRLKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVAGDLIHKQMVHP 119

Query: 415 GNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVLRL 594
             I ++RVRG K +  +    +++EE+C+V+PG+IARFDGS+I+S++Q+WF+E +     
Sbjct: 120 SRILKIRVRGTKKDLMQE---TSSEEICIVLPGIIARFDGSNIQSMLQKWFQEKNSNFWD 176

Query: 595 KKR-----ED----YGRLPHQLWNVSKYGSCSDAAITGIM 687
           +K      ED    Y RLP+Q+WNV+K G C DA +TG+M
Sbjct: 177 QKNRKGDVEDSGSLYQRLPYQIWNVNKNGVCVDATVTGVM 216



 Score =  102 bits (254), Expect(2) = 5e-81
 Identities = 53/75 (70%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = +3

Query: 729 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 908
           QSS+ YYCAVTIGEDAVISAYRLSE+R RS+VGAILSKVVPAA ST++S SK+IWRS   
Sbjct: 224 QSSQRYYCAVTIGEDAVISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQ 283

Query: 909 SSNK--EVKPQTFAK 947
           S  +  E K Q+FA+
Sbjct: 284 SPKRKPEAKTQSFAR 298


>ref|NP_188109.1| uncharacterized protein [Arabidopsis thaliana]
           gi|8777474|dbj|BAA97054.1| unnamed protein product
           [Arabidopsis thaliana] gi|63147384|gb|AAY34165.1|
           At3g14910 [Arabidopsis thaliana]
           gi|115646783|gb|ABJ17116.1| At3g14910 [Arabidopsis
           thaliana] gi|332642066|gb|AEE75587.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 455

 Score =  224 bits (571), Expect(2) = 4e-80
 Identities = 120/220 (54%), Positives = 159/220 (72%), Gaps = 11/220 (5%)
 Frame = +1

Query: 61  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 240
           MA++ HLTE+G I C ELTE GAGK E WL+ NPNLL++L +HS ALANR LILI+N+ +
Sbjct: 1   MAKRIHLTELGCIACEELTELGAGK-EGWLVNNPNLLSALDSHSLALANRFLILIVNWGD 59

Query: 241 NHVIK-KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQIVHP 414
               + KI+P L+ IE E ITAIEW+VFDD RV++ GTS GYLL YS+ GDLIHKQIVH 
Sbjct: 60  PDAPRVKIRPDLSPIEAESITAIEWLVFDDVRVVVAGTSCGYLLVYSVTGDLIHKQIVHQ 119

Query: 415 GNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLVL-- 588
             I ++RVRG K +  +    +++EE+C+V+PGVIARFDGS+I+S++Q+W +E +     
Sbjct: 120 SRILKIRVRGTKKDLMQE---TSSEEICIVLPGVIARFDGSNIQSMVQKWVQEKNSNFWD 176

Query: 589 ---RLKKRED----YGRLPHQLWNVSKYGSCSDAAITGIM 687
              R    ED    Y RLP+Q+WNV+K G C DA +TG+M
Sbjct: 177 QKNRKGDAEDTGSLYQRLPYQIWNVNKNGVCVDATVTGVM 216



 Score =  101 bits (251), Expect(2) = 4e-80
 Identities = 52/75 (69%), Positives = 62/75 (82%), Gaps = 2/75 (2%)
 Frame = +3

Query: 729 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 908
           QSS+ YYCAVTIGED+VISAYRLSE+R RS+VGAILSKVVPAA ST++S SK+IWRS   
Sbjct: 224 QSSQRYYCAVTIGEDSVISAYRLSEDRGRSLVGAILSKVVPAAASTIASFSKLIWRSNDQ 283

Query: 909 SSNK--EVKPQTFAK 947
           S  +  E K Q+FA+
Sbjct: 284 SPKRKPEAKTQSFAR 298


>ref|XP_003540058.1| PREDICTED: rab3 GTPase-activating protein non-catalytic
           subunit-like [Glycine max]
          Length = 459

 Score =  202 bits (513), Expect(2) = 2e-75
 Identities = 106/223 (47%), Positives = 156/223 (69%), Gaps = 14/223 (6%)
 Frame = +1

Query: 61  MARKTHLTEIGNITCAELTEFGAGKKENWLLENPNLLTSLTTHSFALANRSLILIINYHE 240
           MAR+++ TE+G I C EL E GAGK  +WL+E P LL ++ THS  LANRS IL++++  
Sbjct: 1   MARRSYKTELGCIACEELGELGAGKP-HWLVETPQLLCAIDTHSLILANRSTILLLSWSS 59

Query: 241 NHVIK----KIKPLLTSIEGE-ITAIEWIVFDDARVILIGTSNGYLLFYSLDGDLIHKQI 405
           +        KI+P L+ I+ E I+A+EW+ F D RVI+ GTS+G +LFYSL G+LIH+Q+
Sbjct: 60  DSSAAPPPLKIRPDLSPIDAESISALEWLAFRDHRVIVAGTSSGNVLFYSLRGELIHRQM 119

Query: 406 VHPGNIRRLRVRGNKLNGSRHDDLSTTEEVCVVMPGVIARFDGSDIKSLIQRWFRESHLV 585
           ++P  + +LRVRG K +  +    +++EE C++M GVIA FDGSDI++++Q+WF ESH  
Sbjct: 120 IYPSRVLKLRVRGTKKDLIQD---TSSEEFCLIMSGVIAHFDGSDIQNMLQKWFEESHSR 176

Query: 586 L-----RLKKREDYG----RLPHQLWNVSKYGSCSDAAITGIM 687
                 +    ED+G    ++P+QLWN+ KYG+C++AAITGIM
Sbjct: 177 FWDQNPKSHDSEDFGNTDVKIPYQLWNIGKYGTCAEAAITGIM 219



 Score =  108 bits (269), Expect(2) = 2e-75
 Identities = 54/74 (72%), Positives = 63/74 (85%), Gaps = 1/74 (1%)
 Frame = +3

Query: 729 QSSEHYYCAVTIGEDAVISAYRLSENRNRSIVGAILSKVVPAAFSTLSSVSKMIWRSEKD 908
           QSS+ YYCAV +GEDAVISAYRLSEN+ RS+VGAILSKVVPA FST+SS SK+IWRSE+ 
Sbjct: 228 QSSQRYYCAVAVGEDAVISAYRLSENKGRSLVGAILSKVVPATFSTISSFSKLIWRSEQS 287

Query: 909 SSNK-EVKPQTFAK 947
           S  K + KPQ FA+
Sbjct: 288 SPKKSDQKPQPFAR 301