BLASTX nr result

ID: Coptis25_contig00022501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022501
         (428 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransgluc...   208   4e-52
gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium ...   205   3e-51
gb|AFR46574.1| xyloglucan endotransglucosylase/hydrolase 5 [Rosa...   203   1e-50
gb|AFK40151.1| unknown [Medicago truncatula]                          203   1e-50
ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|2...   202   2e-50

>ref|XP_002263411.1| PREDICTED: probable xyloglucan endotransglucosylase/hydrolase
           protein 33 [Vitis vinifera] gi|296086546|emb|CBI32135.3|
           unnamed protein product [Vitis vinifera]
          Length = 313

 Score =  208 bits (529), Expect = 4e-52
 Identities = 88/123 (71%), Positives = 107/123 (86%)
 Frame = +1

Query: 58  VQMQMSNSEIFPHNHDEIDIELLGHQNRKEWILQTNIYGNGSIKTGREEKFHLWFDPTEQ 237
           V   MSN+++FPHNHDEIDIELLGH+ RK+W+LQTN+YGNGS+ TGREEKF LWFDPTEQ
Sbjct: 107 VAFYMSNADLFPHNHDEIDIELLGHEKRKDWVLQTNMYGNGSVSTGREEKFRLWFDPTEQ 166

Query: 238 HHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMSLHCTIWDGSEWATNGGKDP 417
           +H YS IWN +H VFLVDNVP+RE+ +++ ISS YP KPMS++ TIWDGSEWAT+GGK P
Sbjct: 167 YHHYSFIWNRHHIVFLVDNVPVREILYNDAISSVYPSKPMSVYATIWDGSEWATHGGKYP 226

Query: 418 VNY 426
           V+Y
Sbjct: 227 VDY 229


>gb|ABA54988.1| xyloglucan endotransglycosylase hydrolase [Apium graveolens]
          Length = 307

 Score =  205 bits (522), Expect = 3e-51
 Identities = 88/123 (71%), Positives = 107/123 (86%)
 Frame = +1

Query: 58  VQMQMSNSEIFPHNHDEIDIELLGHQNRKEWILQTNIYGNGSIKTGREEKFHLWFDPTEQ 237
           V   +SNS+++PHNHDEID ELLGH+ R++W+LQTNIYGNGS KTGREEKF+LWFDPT +
Sbjct: 102 VAFYLSNSDMYPHNHDEIDFELLGHEKRRDWVLQTNIYGNGSTKTGREEKFYLWFDPTIE 161

Query: 238 HHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMSLHCTIWDGSEWATNGGKDP 417
            HQYSI+WN++HTVFLVDNVP+REV H+  I+SAYP KPMS++ TIWD SEWAT+GGK  
Sbjct: 162 SHQYSILWNNHHTVFLVDNVPVREVVHNAAIASAYPSKPMSVYATIWDASEWATHGGKYA 221

Query: 418 VNY 426
           VNY
Sbjct: 222 VNY 224


>gb|AFR46574.1| xyloglucan endotransglucosylase/hydrolase 5 [Rosa x borboniana]
          Length = 291

 Score =  203 bits (517), Expect = 1e-50
 Identities = 87/123 (70%), Positives = 105/123 (85%)
 Frame = +1

Query: 58  VQMQMSNSEIFPHNHDEIDIELLGHQNRKEWILQTNIYGNGSIKTGREEKFHLWFDPTEQ 237
           V   +SN+++FPHNHDEIDIELLGH  R EW++QTN+Y NGS+ TGREEKF+LWFDPT Q
Sbjct: 91  VAFYLSNADVFPHNHDEIDIELLGHDKRNEWVIQTNVYANGSVNTGREEKFYLWFDPTTQ 150

Query: 238 HHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMSLHCTIWDGSEWATNGGKDP 417
           HHQY+IIWN++HTVFLVDN+P+RE  HS   S+ YP KPMS++ TIWDGSEWAT+GGK P
Sbjct: 151 HHQYTIIWNNHHTVFLVDNIPVREFQHS---STFYPSKPMSVYATIWDGSEWATHGGKYP 207

Query: 418 VNY 426
           VNY
Sbjct: 208 VNY 210


>gb|AFK40151.1| unknown [Medicago truncatula]
          Length = 311

 Score =  203 bits (517), Expect = 1e-50
 Identities = 87/123 (70%), Positives = 102/123 (82%)
 Frame = +1

Query: 58  VQMQMSNSEIFPHNHDEIDIELLGHQNRKEWILQTNIYGNGSIKTGREEKFHLWFDPTEQ 237
           V   +SN++ FPHNHDEIDIELLGH  R +W++QTNIY NGS++TGREEKF+LWFDPT+Q
Sbjct: 107 VAFYLSNADKFPHNHDEIDIELLGHDKRNDWVIQTNIYANGSVRTGREEKFYLWFDPTQQ 166

Query: 238 HHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMSLHCTIWDGSEWATNGGKDP 417
           HH YSI+WNS HTVF VDN+P+RE  H    S  YPLKPMSL+ TIWDGSEWAT+GGK P
Sbjct: 167 HHYYSILWNSYHTVFFVDNIPVREFIHKNTPSFIYPLKPMSLYATIWDGSEWATHGGKYP 226

Query: 418 VNY 426
           VNY
Sbjct: 227 VNY 229


>ref|XP_002320268.1| predicted protein [Populus trichocarpa] gi|222861041|gb|EEE98583.1|
           predicted protein [Populus trichocarpa]
          Length = 312

 Score =  202 bits (515), Expect = 2e-50
 Identities = 88/123 (71%), Positives = 101/123 (82%)
 Frame = +1

Query: 58  VQMQMSNSEIFPHNHDEIDIELLGHQNRKEWILQTNIYGNGSIKTGREEKFHLWFDPTEQ 237
           V   +SN++ +PHNHDEIDIELLGH  R +W+LQTN+Y NGS  TGREEKF+LWFDPTEQ
Sbjct: 108 VAFYLSNADNYPHNHDEIDIELLGHDMRNDWVLQTNVYANGSTGTGREEKFYLWFDPTEQ 167

Query: 238 HHQYSIIWNSNHTVFLVDNVPIREVTHSEGISSAYPLKPMSLHCTIWDGSEWATNGGKDP 417
           HH YSIIWNS+H VFLVDNVP+RE  HS    S YP KPMSL+ TIWDGS+WAT+GGK P
Sbjct: 168 HHHYSIIWNSHHIVFLVDNVPVREFAHSSSYPSVYPSKPMSLYATIWDGSQWATHGGKYP 227

Query: 418 VNY 426
           VNY
Sbjct: 228 VNY 230


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