BLASTX nr result

ID: Coptis25_contig00022491 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022491
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259...   145   1e-32
ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|2...   133   6e-29
ref|XP_002524810.1| conserved hypothetical protein [Ricinus comm...   132   1e-28
ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|2...   123   8e-26
ref|XP_003554239.1| PREDICTED: uncharacterized protein LOC100777...   112   1e-22

>ref|XP_002274278.1| PREDICTED: uncharacterized protein LOC100259706 [Vitis vinifera]
           gi|296086692|emb|CBI32327.3| unnamed protein product
           [Vitis vinifera]
          Length = 429

 Score =  145 bits (366), Expect = 1e-32
 Identities = 93/224 (41%), Positives = 135/224 (60%), Gaps = 2/224 (0%)
 Frame = -1

Query: 674 FNQEQSIFRGSKEYQTFPPSPGISKEIVKSGSLQVRPAKFDDQWKSSMGWIVKYNQPDKL 495
           F+ EQ + R SK+ Q    SPG  +E  +SG L +RP + ++ WK   G +++ +Q  K+
Sbjct: 18  FHPEQGMCRVSKDCQPLLGSPGPRQESTRSG-LNLRPLQREETWKPLSG-LLESDQFVKI 75

Query: 494 VSTIKRPVLIDVKETHPESVLFSFGIAEQCTRQQNILKFLMSGSSEAGREGIDFSLLSNL 315
             T+ R VL+D ++T P SVLFS  IAEQCTR + IL+FLMS SSE  +  +D S+LS+L
Sbjct: 76  DQTVSRHVLLDAQDTLPGSVLFSLAIAEQCTRHEKILQFLMSRSSEIEKGELDLSVLSDL 135

Query: 314 MGLDTCRNYKNLQKTSLEGCLYEIEREKYQHSLLFPRTKLYSQTPVQEFIGNLT-SFKTT 138
           MG+         Q      C    + E  Q +L++P ++L++Q P  +F+G+L  S K  
Sbjct: 136 MGIQASSTGMQEQPVDPGFCSCYQDTEA-QPALIYPSSELHAQKPFVDFVGDLARSSKLI 194

Query: 137 AQQDGRVLFSVT-EQIKDLHSVVEEFYPSKSSARLSNQSILVPY 9
              DGRV F  T  ++KDL SVV EFY SK+S +   QS+LVP+
Sbjct: 195 VHPDGRVSFMGTGTEMKDLLSVVAEFYLSKNSTKHGKQSLLVPH 238


>ref|XP_002321059.1| predicted protein [Populus trichocarpa] gi|222861832|gb|EEE99374.1|
           predicted protein [Populus trichocarpa]
          Length = 418

 Score =  133 bits (335), Expect = 6e-29
 Identities = 84/226 (37%), Positives = 133/226 (58%), Gaps = 3/226 (1%)
 Frame = -1

Query: 674 FNQEQSIFRGSKEYQTFPPSPGISKEIVKSGSLQVRPAKFDDQWKSSMGWIVKYNQPDKL 495
           F+Q+Q   R  K+ Q + PS G  +EI +  SL ++  + ++ W+  M    + N+  ++
Sbjct: 20  FHQDQK--RVFKDCQPYLPSQGTRQEITRLNSLVLKLHQHEEPWRP-MNRFCESNRFTEI 76

Query: 494 VSTIKRPVLIDVKETHPESVLFSFGIAEQCTRQQNILKFLMSGSSEAGREGIDFSLLSNL 315
            ST++ P L+DV++  P+SVLFSFGI E+CTRQ+ IL+FLMS S++  R+G+D SLLS L
Sbjct: 77  DSTVRTPTLVDVQDARPDSVLFSFGIVEKCTRQEKILQFLMSESNKLERDGLDLSLLSEL 136

Query: 314 MGLDTCRNYKNLQKTSLEGCLYEIEREKYQHS-LLFPRTKLYSQTPVQEFIGNLT-SFKT 141
           MGL T                   + ++  HS L++P  +L +   + +F+ ++  S K 
Sbjct: 137 MGLQTVM----------------FDAQQLSHSPLIYPSGQLDAPKSLVDFVADMVCSSKL 180

Query: 140 TAQQDGRVLFSVT-EQIKDLHSVVEEFYPSKSSARLSNQSILVPYL 6
           T   DGRVL + +  ++KD+ S V EFY SK+S     QS+L+P L
Sbjct: 181 TVLPDGRVLLTGSGTEMKDVLSTVAEFYLSKNSTMWKKQSMLIPKL 226


>ref|XP_002524810.1| conserved hypothetical protein [Ricinus communis]
           gi|223535994|gb|EEF37653.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  132 bits (333), Expect = 1e-28
 Identities = 84/212 (39%), Positives = 126/212 (59%), Gaps = 2/212 (0%)
 Frame = -1

Query: 641 KEYQTFPPSPGISKEIVKSGSLQVRPAKFDDQWKSSMGWIVKYNQPDKLVSTIKRPVLID 462
           K+ Q + P  G   EI +  SL V P + +  W+   G+  +  Q  ++ S + RPVLID
Sbjct: 29  KDSQPYFPCQGARHEIKRPNSLSVEPCQHEP-WRPVNGFCDR-TQFARIDSPVGRPVLID 86

Query: 461 VKETHPESVLFSFGIAEQCTRQQNILKFLMSGSSEAGREGIDFSLLSNLMGLDTCRNYKN 282
           V++T P+SVLFSFGIAEQCT+ + ILKFL SGSSE  + G+D SLLS+LM          
Sbjct: 87  VQDTCPDSVLFSFGIAEQCTKHEKILKFLTSGSSELEKSGLDLSLLSDLM---------- 136

Query: 281 LQKTSLEGCLYEIEREKYQHSLLFPRTKLYSQTPVQEFIGNL-TSFKTTAQQDGRVLFSV 105
                L+  + ++ ++     L++P     +  P+ +F+G+L +S K T   DGRVL + 
Sbjct: 137 ----DLQALVLDVHQQPCS-PLIYPNGSCDAPKPLVDFVGDLASSSKITVHPDGRVLLTG 191

Query: 104 T-EQIKDLHSVVEEFYPSKSSARLSNQSILVP 12
           +  ++KD+ S+V EFY SK+S   + QS+LVP
Sbjct: 192 SGTEMKDILSIVAEFYLSKTSTTWTKQSMLVP 223


>ref|XP_002301565.1| predicted protein [Populus trichocarpa] gi|222843291|gb|EEE80838.1|
           predicted protein [Populus trichocarpa]
          Length = 401

 Score =  123 bits (308), Expect = 8e-26
 Identities = 79/215 (36%), Positives = 126/215 (58%), Gaps = 3/215 (1%)
 Frame = -1

Query: 641 KEYQTFPPSPGISKEIVKSGSLQVRPAKFDDQWKSSMGWIVKYNQPDKLVSTIKRPVLID 462
           +++Q + PS G  +EI +S SL ++  + +  W+  M    + NQ  ++ ST+K P+LID
Sbjct: 3   QDFQPYLPSWGARQEITRSSSLMLKLPQHEQPWRP-MNRFYQSNQFAEIDSTVKMPILID 61

Query: 461 VKETHPESVLFSFGIAEQCTRQQNILKFLMSGSSEAGREGIDFSLLSNLMGLDTCRNYKN 282
           V++  P+SVLF FGI E+CTR + IL+FLMS S++  R+G+D S LS L GL       +
Sbjct: 62  VQDARPDSVLFIFGIVEKCTRHEKILQFLMSKSNKLERDGLDLSFLSELTGLQAVMFDAH 121

Query: 281 LQKTSLEGCLYEIEREKYQHSLLFPRTKL-YSQTPVQEFIGNLT-SFKTTAQQDGRVLFS 108
            Q  S          ++    L++P  +  Y ++PV + +G++  S K     DGRVL +
Sbjct: 122 QQSHS--------PHQQSHSPLIYPSDQFDYLKSPV-DILGDMAHSSKLRVLPDGRVLLT 172

Query: 107 VT-EQIKDLHSVVEEFYPSKSSARLSNQSILVPYL 6
            +  ++KD+ S V EFY S++S     QS+LVP+L
Sbjct: 173 GSGMEMKDILSTVAEFYLSRNSNIWRKQSLLVPHL 207


>ref|XP_003554239.1| PREDICTED: uncharacterized protein LOC100777424 [Glycine max]
          Length = 420

 Score =  112 bits (280), Expect = 1e-22
 Identities = 75/213 (35%), Positives = 118/213 (55%), Gaps = 2/213 (0%)
 Frame = -1

Query: 641 KEYQTFPPSPGISKEIVKSGSLQVRPAKFDDQWKSSMGWIVKYNQPDKLVSTIKRPVLID 462
           K YQTF PSP    ++++  S  + P+  ++  KS   W   YN+   +  +++RP+LID
Sbjct: 32  KGYQTFFPSPVAKADLIRYQSRCLEPSPCEESMKSQNEWF-DYNKFVNVDFSVERPMLID 90

Query: 461 VKETHPESVLFSFGIAEQCTRQQNILKFLMSGSSEAGREGIDFSLLSNLMGLDTCRNYKN 282
            +     +VL  FGI +QCT++  I+  LMS ++EAG +G + SLLS+LM          
Sbjct: 91  DQANCSNAVLLGFGIVDQCTKRDEIINLLMSETAEAGIDGANLSLLSDLM---------K 141

Query: 281 LQKTSLEGCLYEIEREKYQHSLLFPRTKLYSQTPVQEFI-GNLTSFKTTAQQDGRVLFSV 105
           LQ + ++      E ++   SL++P +K     P+  F+ G+  S K T   DG++ F  
Sbjct: 142 LQLSGID------ETQQPLSSLIYPTSKFNILKPLLYFVQGSALSSKITVHPDGQMTFMG 195

Query: 104 TE-QIKDLHSVVEEFYPSKSSARLSNQSILVPY 9
           T  ++KDL SVV E Y SK S +   QS+LVP+
Sbjct: 196 TAIELKDLLSVVAESYLSKCSRKGEKQSMLVPH 228


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