BLASTX nr result

ID: Coptis25_contig00022484 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022484
         (477 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI40095.3| unnamed protein product [Vitis vinifera]              141   5e-32
ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   141   5e-32
emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]   141   5e-32
ref|XP_003549301.1| PREDICTED: protein CHLOROPLAST IMPORT APPARA...   140   1e-31
ref|XP_002324691.1| predicted protein [Populus trichocarpa] gi|2...   139   2e-31

>emb|CBI40095.3| unnamed protein product [Vitis vinifera]
          Length = 392

 Score =  141 bits (356), Expect = 5e-32
 Identities = 77/102 (75%), Positives = 85/102 (83%)
 Frame = -3

Query: 418 LKLDYEKVLNAWSDRGSPFSDDILGTESSESDAIARLAQIDLLFSENGGVREASVLRYRE 239
           LKL+Y+ VL+AWSDRGSPFS +   TE   +D  ARLAQIDL FSE GGVREASVLRY+E
Sbjct: 295 LKLNYDDVLSAWSDRGSPFSRE---TEFPGNDTAARLAQIDL-FSECGGVREASVLRYKE 350

Query: 238 KRRSRLFSKKIRYQVRKVNADRRPRMKGRFVRRPASALKDER 113
           KRR+RLFSKKIRYQVRKVNADRRPRMKGRFVRRP S    +R
Sbjct: 351 KRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNSNGQR 392


>ref|XP_002268213.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Vitis
           vinifera]
          Length = 392

 Score =  141 bits (356), Expect = 5e-32
 Identities = 77/102 (75%), Positives = 85/102 (83%)
 Frame = -3

Query: 418 LKLDYEKVLNAWSDRGSPFSDDILGTESSESDAIARLAQIDLLFSENGGVREASVLRYRE 239
           LKL+Y+ VL+AWSDRGSPFS +   TE   +D  ARLAQIDL FSE GGVREASVLRY+E
Sbjct: 295 LKLNYDDVLSAWSDRGSPFSRE---TEFPGNDTAARLAQIDL-FSECGGVREASVLRYKE 350

Query: 238 KRRSRLFSKKIRYQVRKVNADRRPRMKGRFVRRPASALKDER 113
           KRR+RLFSKKIRYQVRKVNADRRPRMKGRFVRRP S    +R
Sbjct: 351 KRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNSNGQR 392


>emb|CAN72725.1| hypothetical protein VITISV_015092 [Vitis vinifera]
          Length = 392

 Score =  141 bits (356), Expect = 5e-32
 Identities = 77/102 (75%), Positives = 85/102 (83%)
 Frame = -3

Query: 418 LKLDYEKVLNAWSDRGSPFSDDILGTESSESDAIARLAQIDLLFSENGGVREASVLRYRE 239
           LKL+Y+ VL+AWSDRGSPFS +   TE   +D  ARLAQIDL FSE GGVREASVLRY+E
Sbjct: 295 LKLNYDDVLSAWSDRGSPFSRE---TEFPGNDTAARLAQIDL-FSECGGVREASVLRYKE 350

Query: 238 KRRSRLFSKKIRYQVRKVNADRRPRMKGRFVRRPASALKDER 113
           KRR+RLFSKKIRYQVRKVNADRRPRMKGRFVRRP S    +R
Sbjct: 351 KRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRPNSNSNGQR 392


>ref|XP_003549301.1| PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2-like [Glycine
           max]
          Length = 398

 Score =  140 bits (352), Expect = 1e-31
 Identities = 74/104 (71%), Positives = 85/104 (81%)
 Frame = -3

Query: 424 LGLKLDYEKVLNAWSDRGSPFSDDILGTESSESDAIARLAQIDLLFSENGGVREASVLRY 245
           L LKLDY+ V NAWSD G+PF+DD    +  E+D  ARL+QIDLL+ +NGGVREASVLRY
Sbjct: 296 LMLKLDYDGVRNAWSDSGTPFTDDSPLADVPENDVTARLSQIDLLW-DNGGVREASVLRY 354

Query: 244 REKRRSRLFSKKIRYQVRKVNADRRPRMKGRFVRRPASALKDER 113
           +EKRR+RLFSKKIRYQVRKVNADRRPRMKGRFVRR  S+    R
Sbjct: 355 KEKRRTRLFSKKIRYQVRKVNADRRPRMKGRFVRRLNSSSNAHR 398


>ref|XP_002324691.1| predicted protein [Populus trichocarpa] gi|222866125|gb|EEF03256.1|
           predicted protein [Populus trichocarpa]
          Length = 141

 Score =  139 bits (350), Expect = 2e-31
 Identities = 76/104 (73%), Positives = 88/104 (84%), Gaps = 1/104 (0%)
 Frame = -3

Query: 418 LKLDYEKVLNAWSDRGSPFSDDILGTESSESDAIARLAQIDLLFSENGGVREASVLRYRE 239
           LKL+Y+ VLNAWSDRGSPFS++ +G+    +D  ARLAQIDL FSENG +REASVLRY+E
Sbjct: 32  LKLNYDNVLNAWSDRGSPFSEETMGSAEG-TDVSARLAQIDL-FSENG-MREASVLRYKE 88

Query: 238 KRRSRLFSKKIRYQVRKVNADRRPRMKGRFVRRP-ASALKDERK 110
           KRR+RLFSKKIRYQVRKVNAD+RPRMKGRFVRRP  S   DE +
Sbjct: 89  KRRTRLFSKKIRYQVRKVNADQRPRMKGRFVRRPNPSTSSDEHE 132


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