BLASTX nr result

ID: Coptis25_contig00022478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022478
         (286 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002462724.1| hypothetical protein SORBIDRAFT_02g030930 [S...   127   7e-28
ref|NP_001150185.1| glucan endo-1,3-beta-glucosidase, acidic iso...   127   1e-27
gb|ADR83569.1| beta-1,3-glucanase [Lycium barbarum] gi|313906956...   126   2e-27
gb|ACG38164.1| glucan endo-1,3-beta-glucosidase, acidic isoform ...   126   2e-27
emb|CAA82271.1| beta-1,3-glucanase [Nicotiana tabacum]                125   4e-27

>ref|XP_002462724.1| hypothetical protein SORBIDRAFT_02g030930 [Sorghum bicolor]
           gi|241926101|gb|EER99245.1| hypothetical protein
           SORBIDRAFT_02g030930 [Sorghum bicolor]
          Length = 346

 Score =  127 bits (320), Expect = 7e-28
 Identities = 61/93 (65%), Positives = 73/93 (78%), Gaps = 1/93 (1%)
 Frame = +3

Query: 6   LHPLLQFLAETGAPLMVNVYPFFSYVNNPNDIPLNYALFNSPPT-VQDNGLVYDNLFDAT 182
           L P+LQFLA+TGAP MVN YPF SYVN+P ++ L YALF +    VQD  LVY NLFDAT
Sbjct: 186 LRPMLQFLADTGAPFMVNTYPFISYVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDAT 245

Query: 183 IDAFISAMEKEGFPGIPVAVTETGWPTSGGEAA 281
           +DA ++A+EKEGF  +PVAVTETGWPT+G  AA
Sbjct: 246 VDALVAALEKEGFGAVPVAVTETGWPTAGHPAA 278


>ref|NP_001150185.1| glucan endo-1,3-beta-glucosidase, acidic isoform precursor [Zea
           mays] gi|223944679|gb|ACN26423.1| unknown [Zea mays]
           gi|414886449|tpg|DAA62463.1| TPA: putative O-Glycosyl
           hydrolase superfamily protein [Zea mays]
          Length = 348

 Score =  127 bits (318), Expect = 1e-27
 Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = +3

Query: 6   LHPLLQFLAETGAPLMVNVYPFFSYVNNPNDIPLNYALFNSPPT-VQDNGLVYDNLFDAT 182
           L P+L+FLA+TGAP MVN YPF S+VN+P ++ L YALF +    VQD  LVY NLFDAT
Sbjct: 188 LRPMLRFLADTGAPFMVNAYPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDAT 247

Query: 183 IDAFISAMEKEGFPGIPVAVTETGWPTSGGEAA 281
           +DA ++A+EKEGF G+PVAVTETGWPT+G  AA
Sbjct: 248 VDALVAALEKEGFDGVPVAVTETGWPTAGHPAA 280


>gb|ADR83569.1| beta-1,3-glucanase [Lycium barbarum] gi|313906956|gb|ADR83570.1|
           beta-1,3-glucanase [Lycium barbarum]
          Length = 344

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/93 (64%), Positives = 73/93 (78%)
 Frame = +3

Query: 6   LHPLLQFLAETGAPLMVNVYPFFSYVNNPNDIPLNYALFNSPPTVQDNGLVYDNLFDATI 185
           L PLLQFL +T +PLMVNVYPFF+Y+NNP  + L++ALF S     D  L YDN+FDA+I
Sbjct: 185 LLPLLQFLHDTRSPLMVNVYPFFAYINNPKYVSLDHALFRSSYVEYDQNLDYDNMFDASI 244

Query: 186 DAFISAMEKEGFPGIPVAVTETGWPTSGGEAAA 284
           DAF+ AMEKEGF GIPV VTETGWPT+G + A+
Sbjct: 245 DAFVYAMEKEGFEGIPVMVTETGWPTAGIDGAS 277


>gb|ACG38164.1| glucan endo-1,3-beta-glucosidase, acidic isoform precursor [Zea
           mays]
          Length = 348

 Score =  126 bits (317), Expect = 2e-27
 Identities = 60/93 (64%), Positives = 74/93 (79%), Gaps = 1/93 (1%)
 Frame = +3

Query: 6   LHPLLQFLAETGAPLMVNVYPFFSYVNNPNDIPLNYALFNSPPT-VQDNGLVYDNLFDAT 182
           L P+L+FLA+TGAP MVN YPF S+VN+P ++ L YALF +    VQD  LVY NLFDAT
Sbjct: 188 LRPMLRFLADTGAPFMVNAYPFISHVNDPANVQLAYALFGAGAAPVQDGALVYTNLFDAT 247

Query: 183 IDAFISAMEKEGFPGIPVAVTETGWPTSGGEAA 281
           +DA ++A+EKEGF G+PVAVTETGWPT+G  AA
Sbjct: 248 VDALVAALEKEGFGGVPVAVTETGWPTAGHPAA 280


>emb|CAA82271.1| beta-1,3-glucanase [Nicotiana tabacum]
          Length = 344

 Score =  125 bits (314), Expect = 4e-27
 Identities = 58/93 (62%), Positives = 71/93 (76%)
 Frame = +3

Query: 6   LHPLLQFLAETGAPLMVNVYPFFSYVNNPNDIPLNYALFNSPPTVQDNGLVYDNLFDATI 185
           L P LQFL  T +PLMVNVYPFF+Y+NNP  + L++A+F S     D  L YDN+FDA+I
Sbjct: 185 LLPFLQFLRHTSSPLMVNVYPFFAYINNPQYVSLDHAVFRSSYVEYDQNLAYDNMFDASI 244

Query: 186 DAFISAMEKEGFPGIPVAVTETGWPTSGGEAAA 284
           DAF+ AMEKEGF GIPV VTETGWPT+G + A+
Sbjct: 245 DAFVYAMEKEGFEGIPVMVTETGWPTAGIDGAS 277


Top