BLASTX nr result

ID: Coptis25_contig00022476 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022476
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein lig...   357   1e-96
emb|CBI19874.3| unnamed protein product [Vitis vinifera]              357   1e-96
emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]   357   1e-96
ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus c...   353   2e-95
ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776...   350   2e-94

>ref|XP_002279863.2| PREDICTED: putative E3 ubiquitin-protein ligase LIN-1-like [Vitis
            vinifera]
          Length = 1494

 Score =  357 bits (917), Expect = 1e-96
 Identities = 183/254 (72%), Positives = 209/254 (82%)
 Frame = +1

Query: 1    ADERVGETLTSVDSDFDCLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNR 180
            ADE VGETLT+VDSDFDCLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+
Sbjct: 741  ADESVGETLTNVDSDFDCLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNK 800

Query: 181  TEELNDFQLVMNPKDAAVALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARR 360
             +E ++  LVM PKDAA+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+
Sbjct: 801  NDESDNLLLVMEPKDAAIALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQ 860

Query: 361  SVVSILLCCMRTDRSSRNLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRTIS 540
            ++VSILLCC+  DRS RNLIA+R+ L+ VLELFH+GDD VRGIC  FLSELV LNRR   
Sbjct: 861  AIVSILLCCIHADRSCRNLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRRIFC 920

Query: 541  NQILQIIKDEGSFSTMHTFLVYLQMAPMEQQPAIAGXXXXXXXXVEPRKMSIYREEAIET 720
            NQIL+IIKDEG+FSTMHTFLVYLQMAPMEQQPAIA         VEPRKMSIYREEAIE 
Sbjct: 921  NQILKIIKDEGAFSTMHTFLVYLQMAPMEQQPAIASLLLQLDLLVEPRKMSIYREEAIEA 980

Query: 721  LNEVLRMKAFPISQ 762
            L E L  K FP SQ
Sbjct: 981  LVEALHKKDFPHSQ 994


>emb|CBI19874.3| unnamed protein product [Vitis vinifera]
          Length = 1510

 Score =  357 bits (917), Expect = 1e-96
 Identities = 183/254 (72%), Positives = 209/254 (82%)
 Frame = +1

Query: 1    ADERVGETLTSVDSDFDCLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNR 180
            ADE VGETLT+VDSDFDCLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+
Sbjct: 757  ADESVGETLTNVDSDFDCLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNK 816

Query: 181  TEELNDFQLVMNPKDAAVALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARR 360
             +E ++  LVM PKDAA+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+
Sbjct: 817  NDESDNLLLVMEPKDAAIALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQ 876

Query: 361  SVVSILLCCMRTDRSSRNLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRTIS 540
            ++VSILLCC+  DRS RNLIA+R+ L+ VLELFH+GDD VRGIC  FLSELV LNRR   
Sbjct: 877  AIVSILLCCIHADRSCRNLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRRIFC 936

Query: 541  NQILQIIKDEGSFSTMHTFLVYLQMAPMEQQPAIAGXXXXXXXXVEPRKMSIYREEAIET 720
            NQIL+IIKDEG+FSTMHTFLVYLQMAPMEQQPAIA         VEPRKMSIYREEAIE 
Sbjct: 937  NQILKIIKDEGAFSTMHTFLVYLQMAPMEQQPAIASLLLQLDLLVEPRKMSIYREEAIEA 996

Query: 721  LNEVLRMKAFPISQ 762
            L E L  K FP SQ
Sbjct: 997  LVEALHKKDFPHSQ 1010


>emb|CAN74785.1| hypothetical protein VITISV_011516 [Vitis vinifera]
          Length = 1494

 Score =  357 bits (917), Expect = 1e-96
 Identities = 183/254 (72%), Positives = 209/254 (82%)
 Frame = +1

Query: 1    ADERVGETLTSVDSDFDCLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNR 180
            ADE VGETLT+VDSDFDCLAALLK GLAEA VLIYQLRP++ QLS ++ +PSLV +ILN+
Sbjct: 741  ADESVGETLTNVDSDFDCLAALLKKGLAEAAVLIYQLRPAFTQLSARNFIPSLVHLILNK 800

Query: 181  TEELNDFQLVMNPKDAAVALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARR 360
             +E ++  LVM PKDAA+ALLEQIL+GGDENSRSLNA+ VIS NG+P LIKCLD+ E R+
Sbjct: 801  NDESDNLLLVMEPKDAAIALLEQILMGGDENSRSLNAMSVISANGIPALIKCLDKVEGRQ 860

Query: 361  SVVSILLCCMRTDRSSRNLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRTIS 540
            ++VSILLCC+  DRS RNLIA+R+ L+ VLELFH+GDD VRGIC  FLSELV LNRR   
Sbjct: 861  AIVSILLCCIHADRSCRNLIANRIDLSSVLELFHTGDDYVRGICTKFLSELVQLNRRIFC 920

Query: 541  NQILQIIKDEGSFSTMHTFLVYLQMAPMEQQPAIAGXXXXXXXXVEPRKMSIYREEAIET 720
            NQIL+IIKDEG+FSTMHTFLVYLQMAPMEQQPAIA         VEPRKMSIYREEAIE 
Sbjct: 921  NQILKIIKDEGAFSTMHTFLVYLQMAPMEQQPAIASLLLQLDLLVEPRKMSIYREEAIEA 980

Query: 721  LNEVLRMKAFPISQ 762
            L E L  K FP SQ
Sbjct: 981  LVEALHKKDFPHSQ 994


>ref|XP_002510542.1| hypothetical protein RCOM_1598060 [Ricinus communis]
            gi|223551243|gb|EEF52729.1| hypothetical protein
            RCOM_1598060 [Ricinus communis]
          Length = 1427

 Score =  353 bits (907), Expect = 2e-95
 Identities = 177/254 (69%), Positives = 208/254 (81%)
 Frame = +1

Query: 1    ADERVGETLTSVDSDFDCLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNR 180
            +DE VGE LTSVDSDFDCLAALLKNGLAEA VLIYQLRP++AQLS  + +PSLV +I  +
Sbjct: 670  SDESVGEILTSVDSDFDCLAALLKNGLAEAAVLIYQLRPTFAQLSAHNFIPSLVHLIQMK 729

Query: 181  TEELNDFQLVMNPKDAAVALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARR 360
             E+ +D QLV+ PKDAA+ALLEQIL GG+ENS+S+NA  VIS NG+P L+KCLDR + R+
Sbjct: 730  NEDSDDLQLVIEPKDAAIALLEQILTGGNENSQSINAFSVISANGIPALLKCLDRMDGRK 789

Query: 361  SVVSILLCCMRTDRSSRNLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRTIS 540
            S++SILLCC+  D+S R+ IASR++L PVLE+FHSG+DCVRG+CID LSELV LNRRT  
Sbjct: 790  SIISILLCCVLADKSCRDFIASRIELCPVLEIFHSGNDCVRGVCIDLLSELVQLNRRTFC 849

Query: 541  NQILQIIKDEGSFSTMHTFLVYLQMAPMEQQPAIAGXXXXXXXXVEPRKMSIYREEAIET 720
            NQIL+IIK+EGSFSTMHTFLVYLQMAPMEQQP IA         VEPRKMSIYREEA+ET
Sbjct: 850  NQILKIIKEEGSFSTMHTFLVYLQMAPMEQQPTIATLLLQLDLLVEPRKMSIYREEAVET 909

Query: 721  LNEVLRMKAFPISQ 762
            L E L  K F  SQ
Sbjct: 910  LIEALHKKEFSNSQ 923


>ref|XP_003536276.1| PREDICTED: uncharacterized protein LOC100776142 [Glycine max]
          Length = 1481

 Score =  350 bits (897), Expect = 2e-94
 Identities = 176/253 (69%), Positives = 211/253 (83%)
 Frame = +1

Query: 4    DERVGETLTSVDSDFDCLAALLKNGLAEAVVLIYQLRPSYAQLSVQDLVPSLVQVILNRT 183
            DERVGETL SVDSDFDCLA LLKNGLAEA +LIYQLRP +AQLS  +L+PSLV+VI N+ 
Sbjct: 732  DERVGETLNSVDSDFDCLATLLKNGLAEAALLIYQLRPVFAQLSAHELIPSLVEVIRNKN 791

Query: 184  EELNDFQLVMNPKDAAVALLEQILIGGDENSRSLNALGVISTNGLPYLIKCLDRFEARRS 363
            E  +DFQLV++P+DAA+A+LEQILIGGDE SRSLNAL V+S NG+P L+K L+R E RRS
Sbjct: 792  EGSDDFQLVLDPRDAAIAILEQILIGGDEYSRSLNALSVVSENGIPALVKYLERMEGRRS 851

Query: 364  VVSILLCCMRTDRSSRNLIASRVQLAPVLELFHSGDDCVRGICIDFLSELVCLNRRTISN 543
            VVSILLCCM+ ++  ++LIA++++L+PVLELFH+G+D VRGIC++FLSELV LNRRT+ N
Sbjct: 852  VVSILLCCMQAEKGCKSLIANKIELSPVLELFHAGNDSVRGICVEFLSELVQLNRRTVCN 911

Query: 544  QILQIIKDEGSFSTMHTFLVYLQMAPMEQQPAIAGXXXXXXXXVEPRKMSIYREEAIETL 723
            QILQ IKDEG+FSTMHTFLVYLQMAPME Q A+A         VEPRKMSIYREEA+ETL
Sbjct: 912  QILQTIKDEGAFSTMHTFLVYLQMAPMEHQLAVASLLLQIDLLVEPRKMSIYREEAVETL 971

Query: 724  NEVLRMKAFPISQ 762
             E L  K F  +Q
Sbjct: 972  IEALWQKDFSNTQ 984


Top