BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022473
         (1083 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|2...   110   6e-22
emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]   107   7e-21
ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatul...   105   1e-20
ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|2...   104   4e-20
ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata sub...   100   8e-19

>ref|XP_002316601.1| predicted protein [Populus trichocarpa] gi|222859666|gb|EEE97213.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score =  110 bits (275), Expect = 6e-22
 Identities = 101/317 (31%), Positives = 145/317 (45%), Gaps = 13/317 (4%)
 Frame = +3

Query: 39  KRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXXPKLDFSSRGYS 218
           K+D        I+ LPD LL +ILSFL TK  V                  L+F  + Y 
Sbjct: 29  KQDMDDSGGKSINDLPDALLQHILSFLETKDAVRTSILSRKWEHLWKSLSNLEFH-QCYF 87

Query: 219 SESARKFMNSIDRVLLSHNLSIIKKFSLSCSNCDNSRINAWLSAILKHKVQELNLSLCVY 398
               + FMNS++RVLL  + S I+KF+LSC   D +R   W+SA +   V+EL ++    
Sbjct: 88  KAKRKIFMNSVERVLLLRDSSNIEKFTLSCGIDDATRTRTWVSAAVNRNVKELCVNFYEG 147

Query: 399 -KKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDECLTDSFS 575
            + ES V P+ LF+CA+LT L ++S G+++  S IS P LKIL L+ V F DE  T    
Sbjct: 148 GESESFVSPLCLFTCATLTKLKITSHGVLRLSSSISLPCLKILSLQHVVFPDEDSTQQIL 207

Query: 576 SFPVLEELXXXXXXXXXXXXXXXXXXPALKCL-VLEM-TDSYDGGTIDFFMMNAPSLVSL 749
           +   LE+L                  P L+ L + EM  +   G      M+   +L   
Sbjct: 208 NLRTLEKL-KISYYDWKNLKAITISAPKLRSLDICEMHRNDLRGSDACHVMIFGTALTFF 266

Query: 750 SWVSDYLPIECNLSDMPSLASAKVIFQKFRPERPKEEMALVSSKLLEGLSHVKTLNISGQ 929
           S+   +    C L    SL  A   F  +       E+A  + K + GLS VK L ++  
Sbjct: 267 SFSGGFWDDYC-LFKSSSLVEA--YFHVYGCYERSREIAHRAYKHIVGLSTVKHLTLTPD 323

Query: 930 IL----------SCAKD 950
           +L          +CAKD
Sbjct: 324 VLKIELSEELPTNCAKD 340


>emb|CAN74740.1| hypothetical protein VITISV_040899 [Vitis vinifera]
          Length = 607

 Score =  107 bits (266), Expect = 7e-21
 Identities = 109/364 (29%), Positives = 165/364 (45%), Gaps = 23/364 (6%)
 Frame = +3

Query: 60   AEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXXPKLDFSSRGYSSESAR-- 233
            + D IS LPD LL +ILSFLPTK  V                P LDF    + + S    
Sbjct: 8    SRDIISNLPDELLCHILSFLPTKFAVGTSILSKRWRYLWASVPILDFDDELWLNPSTLVE 67

Query: 234  ------KFMNSIDRVLLSHNLSIIKKFSLSCSNCDNSRINAWLSAILKHKVQELNLSLCV 395
                   F N +D VL    +S IKKF L   + +   + +W+   L+ +VQEL+L L +
Sbjct: 68   LEERIIMFQNFVDGVLRHSEVSCIKKFRLGYRDNNLDSVYSWICIALERRVQELDLHLLI 127

Query: 396  YKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFF-DECLTDSF 572
              +  + LP   F C +L V+ LS    +  P+ +  P LK L L+ V++  D+ +    
Sbjct: 128  DWR--VELPPMFFICKTLVVVKLSCALFLDIPTTVWLPSLKALHLKSVEYSDDDSIQKLL 185

Query: 573  SSFPVLEELXXXXXXXXXXXXXXXXXXPALKCL-VLEMTDS----YDGGTIDF-FMMNAP 734
            S  PVLEEL                  P+LK L +   TD     Y+    D+  +++AP
Sbjct: 186  SGCPVLEEL-VIEREERDNQWVVNVSNPSLKILRIFFFTDGFAHPYEQEDQDYKVVVDAP 244

Query: 735  SLVSLSWVSDYLPIECNLSDMPSLASAKVIFQKFRPERPKEEMALVSS------KLLEGL 896
            +L  LS ++DYL  +  + D+PSL  A +  ++   E  +       S      +LL  +
Sbjct: 245  NLEYLS-ITDYLSKDYFVKDLPSLVKAFIDVEQDSEEFEESPHNGGISYHGPIYELLGRI 303

Query: 897  SHVKTLNISGQILSCAKDYLND--LPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLET 1070
            S+VK L+++G  L      + D  LP F N+  LE       F+   L +    +P LE 
Sbjct: 304  SNVKCLSLTGVTLDSLSGTIGDYKLPTFHNMTRLE-FLFIGGFNWDFLPNFLHSSPNLEA 362

Query: 1071 LVFK 1082
            LV +
Sbjct: 363  LVIE 366


>ref|XP_003607639.1| F-box/LRR-repeat protein [Medicago truncatula]
            gi|355508694|gb|AES89836.1| F-box/LRR-repeat protein
            [Medicago truncatula]
          Length = 467

 Score =  105 bits (263), Expect = 1e-20
 Identities = 109/354 (30%), Positives = 166/354 (46%), Gaps = 8/354 (2%)
 Frame = +3

Query: 36   LKRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXXPKLDF--SSR 209
            L+R +M   +D IS LP+ +L+YILS L T++ V                P  DF  SS 
Sbjct: 13   LQRYHMVDMKDMISDLPEGILYYILSRLSTEEAVRTSILATKWRYLWTQLPVFDFRDSSP 72

Query: 210  GYSSESARKFMNSIDRVLLSHNLSIIKK--FSLSCSNCDNSRINAWLSAILKHKVQELNL 383
              +S+S    ++ +D++L  H  + IKK    L  +  D  ++++ LS+ L H V +L L
Sbjct: 73   KRNSKSPDCLVDLVDQLL--HKSNRIKKLFIELPVTIVDAGKVSSMLSSALMHDVHDLTL 130

Query: 384  SLCVYKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDECLT 563
            +L   +    VLP +  +  SLT L +    +   P  I FP LKIL    V F +E   
Sbjct: 131  NL-ESENSRFVLPNSFSASRSLTKLDIVFGFLDSVPDGICFPSLKILSFAHVTFTNEKSA 189

Query: 564  DS-FSSFPVLEELXXXXXXXXXXXXXXXXXXPALKCLVLEMTDSYDGGTIDFFMMNAPSL 740
               FS  PVL++L                  P LK L +    S        F ++A +L
Sbjct: 190  QRLFSGCPVLQDL--SFEKCYWVNINISVAIPTLKKLDIFFRSSSLDRNSCMFKIDAVNL 247

Query: 741  VSLSWVSDYLPIECNLSDMPSLASAKVIFQKFRPERPKEEMALVSSKLLEGLSHVKTLNI 920
            +SLS+ S+   I C L +  S+  A +    F  +  +  +A+ + +L   L  V++L +
Sbjct: 248  LSLSYKSN-PTINCFLVNSTSIVDANIDLGFFCVQNNELHVAVFAIELFSRLGSVESLRL 306

Query: 921  SGQILSC---AKDYLNDLPIFENLLWLEVHKDFHHFSTKSLLHLPRIAPYLETL 1073
            S Q + C   AK  L+ LP F+NL  LEVH  F   S + L  + R +P LE L
Sbjct: 307  SDQTIQCLNYAKSALHLLPSFKNLTRLEVH--FDDPSCEVLADILRKSPKLEFL 358


>ref|XP_002316602.1| predicted protein [Populus trichocarpa] gi|222859667|gb|EEE97214.1|
            predicted protein [Populus trichocarpa]
          Length = 460

 Score =  104 bits (259), Expect = 4e-20
 Identities = 107/367 (29%), Positives = 153/367 (41%), Gaps = 14/367 (3%)
 Frame = +3

Query: 21   KEKKLLKRDNMSVAEDRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXXPKLDF 200
            K KKL         E  I  LPD LL +ILSFL T+  V                  L F
Sbjct: 11   KRKKLKAEKETDSGEKSIGNLPDALLEHILSFLSTEAAVRTSILSKKWLHLWKSTTNLTF 70

Query: 201  SSRGYSSESARKFMNSIDRVLLSHNLSIIKKFSLSCSNCDN-SRINAWLSAILKHKVQEL 377
               G  S   + FM+ +DRVL     S I +F LSC   D+ SR+  W+SA +   V++L
Sbjct: 71   F--GLKSPKRKLFMDFVDRVLALRGPSNIVQFYLSCEVKDDPSRVGTWISAAVNRNVKDL 128

Query: 378  NLSLCVYKKESIVLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFFDEC 557
             L L  ++  S VLP  LF+C +LT L ++   I+K PS IS   LKIL L +V F D+ 
Sbjct: 129  YLELRDFEA-SFVLPHCLFNCETLTELEINMPYILKLPSSISLSCLKILNLYEVIFTDDH 187

Query: 558  LTDSFSSFPVLEELXXXXXXXXXXXXXXXXXXPALKCLVL-----EMTDSYDGGTIDFFM 722
             T    S P L EL                  P L+ L +         S  G  +  F 
Sbjct: 188  STQQLFSLPNLVEL-EIHECNWMNLVAVSISAPKLQSLDIHEPCQSSPASLGGCHVRIFG 246

Query: 723  MNAPSLVSLSWVS-DYLPIECNLSDMPSLASAKVIFQKFRPERPKEEMALVSSKLLEGLS 899
             +      +  +S DY   E ++         +     F       + A  +SKLLEG+S
Sbjct: 247  THLADFTIIGTLSNDYCLYESSV--------VETCISIFSAADKPRQTAYRASKLLEGIS 298

Query: 900  HVKTLNISGQILSCAKDYLNDLP-------IFENLLWLEVHKDFHHFSTKSLLHLPRIAP 1058
              ++L ++  ++    D L+D P        F NL  L    +  +  +    H+   +P
Sbjct: 299  SAQSLCLTTNVV----DVLDDAPELLAFPLEFRNLTSLLFESEESNLHSDGFWHIIYNSP 354

Query: 1059 YLETLVF 1079
            +L  L F
Sbjct: 355  HLIALQF 361


>ref|XP_002866147.1| F-box family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297311982|gb|EFH42406.1| F-box family protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 423

 Score =  100 bits (248), Expect = 8e-19
 Identities = 78/257 (30%), Positives = 120/257 (46%), Gaps = 5/257 (1%)
 Frame = +3

Query: 66  DRISKLPDTLLHYILSFLPTKQVVAXXXXXXXXXXXXXXXPKLDFSSRGYSSESARKFMN 245
           DR+S+LPD  L  ILS+LPTK V+                P+L++  R + +   R F  
Sbjct: 6   DRLSQLPDDFLLQILSWLPTKDVMVTSLLSKRWRFLWTLVPRLNYDLRLHDNTYPR-FSQ 64

Query: 246 SIDRVLLSHNLSIIKKFSLS----CSNCDNSRINAWLSAILKHKVQELNLSLCVYKKESI 413
            +DR LL H    ++  ++S    C   +   +  W+   +   V+ELN+S C   +E I
Sbjct: 65  FVDRSLLLHKAPTLESLNISIGSLCYTAEKD-VGVWVRIGVDRFVRELNISYC-SGEEPI 122

Query: 414 VLPIALFSCASLTVLILSSVGIVKAPSFISFPYLKILQLRDVQFF-DECLTDSFSSFPVL 590
            LP  LF+C +L VL L ++ +V A  ++ F  +K L L DV++  D+ L    SS   L
Sbjct: 123 RLPKCLFTCTTLAVLKLENISLVDASCYVCFQSVKTLHLLDVKYLDDQSLPRIISSCSSL 182

Query: 591 EELXXXXXXXXXXXXXXXXXXPALKCLVLEMTDSYDGGTIDFFMMNAPSLVSLSWVSDYL 770
           E+L                  P LK L L  +     G  D F+++AP L  +  + DY 
Sbjct: 183 EDL-VVQRCPGDNVKVVSITAPCLKTLSLHKSSQAFEGDDDGFLIDAPRLKRVD-IEDYW 240

Query: 771 PIECNLSDMPSLASAKV 821
              C + +MP +  A V
Sbjct: 241 GGFCYIENMPEVVEANV 257