BLASTX nr result

ID: Coptis25_contig00022471 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022471
         (663 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydro...   344   8e-93
ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   343   1e-92
ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|2...   340   1e-91
ref|XP_003545531.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   339   2e-91
ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydro...   338   5e-91

>ref|XP_002263912.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Vitis
            vinifera] gi|296084432|emb|CBI24991.3| unnamed protein
            product [Vitis vinifera]
          Length = 1115

 Score =  344 bits (883), Expect = 8e-93
 Identities = 166/221 (75%), Positives = 192/221 (86%)
 Frame = +1

Query: 1    QPEPIPIRYRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVV 180
            QP+P PI+YRG +HLSDML+  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK+EVV
Sbjct: 855  QPKPQPIKYRGVEHLSDMLLHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKEEVV 914

Query: 181  KHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIYKIFQTSETIENINDQNW 360
             H I LP+ STV D+I+DLK KVELSHPN ELRLLEVFYHKIYKIF  +E IENINDQ W
Sbjct: 915  IHTIRLPKQSTVGDVINDLKSKVELSHPNAELRLLEVFYHKIYKIFPLNEKIENINDQYW 974

Query: 361  TLRAEEIPEEEKNCGTHDHIIHVYHFTKDTSQNQMLVQNFCKPFLLVIHDGETLADVKVR 540
            TLRAEEIPEEEKN G HD +IHVYHF KDT+QNQ+ VQNF +PF LVIH+GETLA+VKVR
Sbjct: 975  TLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFGEPFFLVIHEGETLAEVKVR 1034

Query: 541  IQKKLRVPVPDFCKWKFVYISLGRAEYLQDTDIVSTRFQRR 663
            IQKKL+VP  +F KWKF ++SLGR EYLQD+DIVS+RFQRR
Sbjct: 1035 IQKKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSSRFQRR 1075


>ref|XP_004142174.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus] gi|449503435|ref|XP_004162001.1| PREDICTED:
            ubiquitin carboxyl-terminal hydrolase 13-like [Cucumis
            sativus]
          Length = 1118

 Score =  343 bits (881), Expect = 1e-92
 Identities = 165/221 (74%), Positives = 192/221 (86%)
 Frame = +1

Query: 1    QPEPIPIRYRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVV 180
            QP+P PI+YRG +HLSDMLV  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK EVV
Sbjct: 858  QPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVV 917

Query: 181  KHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIYKIFQTSETIENINDQNW 360
             H I LP+ STVAD+I+DLK KVELSHP+ ELRLLEVFYHKIYK+F  +E IENINDQ W
Sbjct: 918  IHTIRLPKQSTVADVINDLKTKVELSHPDAELRLLEVFYHKIYKVFPPNEKIENINDQYW 977

Query: 361  TLRAEEIPEEEKNCGTHDHIIHVYHFTKDTSQNQMLVQNFCKPFLLVIHDGETLADVKVR 540
            TLRAEEIPEEEKN G +D +IHVYHFTKDT+QNQM +QNF +PF LVI++GETLAD+K+R
Sbjct: 978  TLRAEEIPEEEKNLGPNDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVINEGETLADIKLR 1037

Query: 541  IQKKLRVPVPDFCKWKFVYISLGRAEYLQDTDIVSTRFQRR 663
            IQKKL+VP  +F KWKF ++SLGR EYLQDTDIVS RFQRR
Sbjct: 1038 IQKKLQVPDEEFAKWKFAFLSLGRPEYLQDTDIVSNRFQRR 1078


>ref|XP_002316470.1| predicted protein [Populus trichocarpa] gi|222865510|gb|EEF02641.1|
            predicted protein [Populus trichocarpa]
          Length = 1116

 Score =  340 bits (873), Expect = 1e-91
 Identities = 164/221 (74%), Positives = 189/221 (85%)
 Frame = +1

Query: 1    QPEPIPIRYRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVV 180
            QP+P PI+YRG DHLSDMLV  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK EVV
Sbjct: 856  QPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVV 915

Query: 181  KHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIYKIFQTSETIENINDQNW 360
             H I LP+ STV D+I+DLK KVELSHP+ ELRLLEVFYHKIYKIF  +E IENINDQ W
Sbjct: 916  IHTIRLPKQSTVGDVINDLKTKVELSHPSAELRLLEVFYHKIYKIFPHNEKIENINDQYW 975

Query: 361  TLRAEEIPEEEKNCGTHDHIIHVYHFTKDTSQNQMLVQNFCKPFLLVIHDGETLADVKVR 540
            TLRAEEIPEEEKN G HD +IHVYHF KDT+QNQ+ VQNF +PF LVIH+GE LADVK+R
Sbjct: 976  TLRAEEIPEEEKNLGPHDRLIHVYHFMKDTTQNQVQVQNFGEPFFLVIHEGEALADVKMR 1035

Query: 541  IQKKLRVPVPDFCKWKFVYISLGRAEYLQDTDIVSTRFQRR 663
            +Q+KL+VP  +F KWKF ++SLGR EYLQD+DIVS RFQRR
Sbjct: 1036 VQRKLQVPDEEFSKWKFAFLSLGRPEYLQDSDIVSNRFQRR 1076


>ref|XP_003545531.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
            max]
          Length = 1126

 Score =  339 bits (870), Expect = 2e-91
 Identities = 163/221 (73%), Positives = 188/221 (85%)
 Frame = +1

Query: 1    QPEPIPIRYRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVV 180
            QP+P PI+YRG DHLSDMLV  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK EVV
Sbjct: 866  QPKPQPIKYRGVDHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVV 925

Query: 181  KHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIYKIFQTSETIENINDQNW 360
             H I LP+ STV D++ DLK KVELS P  ELRLLEVFYHKIYK+F  +E IE+INDQ W
Sbjct: 926  IHTIRLPKQSTVGDVLDDLKTKVELSDPEAELRLLEVFYHKIYKVFPPNEKIESINDQYW 985

Query: 361  TLRAEEIPEEEKNCGTHDHIIHVYHFTKDTSQNQMLVQNFCKPFLLVIHDGETLADVKVR 540
            TLRAEEIPEEEKN G HD +IHVYHFTKDT+QNQM +QNF +PF LVIH+GETLA++KVR
Sbjct: 986  TLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVIHEGETLAEIKVR 1045

Query: 541  IQKKLRVPVPDFCKWKFVYISLGRAEYLQDTDIVSTRFQRR 663
            IQKKL+VP  +F KWKF + SLGR EYLQD+DIVS+RFQRR
Sbjct: 1046 IQKKLQVPDDEFVKWKFAFFSLGRPEYLQDSDIVSSRFQRR 1086


>ref|XP_003519464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Glycine
            max]
          Length = 1118

 Score =  338 bits (867), Expect = 5e-91
 Identities = 162/221 (73%), Positives = 189/221 (85%)
 Frame = +1

Query: 1    QPEPIPIRYRGADHLSDMLVQNNQTAHLLYYEVLDIPLPELECLKTLEVSFHHATKKEVV 180
            QP+P PI+YRG +HLSDMLV  NQT+ +LYYEVLDIPLPEL+ LKTL+V+FHHATK EVV
Sbjct: 858  QPKPQPIKYRGVEHLSDMLVHYNQTSDILYYEVLDIPLPELQGLKTLKVAFHHATKDEVV 917

Query: 181  KHCITLPEHSTVADLISDLKRKVELSHPNVELRLLEVFYHKIYKIFQTSETIENINDQNW 360
             H I LP+ STV D+++DLK KVELS P  ELRLLEVFYHKIYK+F  +E IE+INDQ W
Sbjct: 918  IHTIRLPKQSTVGDVLNDLKTKVELSDPEAELRLLEVFYHKIYKVFPPNEKIESINDQYW 977

Query: 361  TLRAEEIPEEEKNCGTHDHIIHVYHFTKDTSQNQMLVQNFCKPFLLVIHDGETLADVKVR 540
            TLRAEEIPEEEKN G HD +IHVYHFTKDT+QNQM +QNF +PF LVIH+GETLA++KVR
Sbjct: 978  TLRAEEIPEEEKNLGPHDRLIHVYHFTKDTAQNQMQIQNFGEPFFLVIHEGETLAEIKVR 1037

Query: 541  IQKKLRVPVPDFCKWKFVYISLGRAEYLQDTDIVSTRFQRR 663
            IQKKL+VP  +F KWKF + SLGR EYLQD+DIVS+RFQRR
Sbjct: 1038 IQKKLQVPDDEFVKWKFAFFSLGRPEYLQDSDIVSSRFQRR 1078


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