BLASTX nr result

ID: Coptis25_contig00022469 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022469
         (1142 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 ...   437   e-120
ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 ...   428   e-117
ref|XP_003521916.1| PREDICTED: LOW QUALITY PROTEIN: methionine a...   422   e-116
ref|XP_003627624.1| Methionine adenosyltransferase 2 subunit bet...   419   e-115
ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [S...   416   e-114

>ref|XP_003528874.1| PREDICTED: methionine adenosyltransferase 2 subunit beta-like
           [Glycine max]
          Length = 324

 Score =  437 bits (1125), Expect = e-120
 Identities = 225/318 (70%), Positives = 262/318 (82%), Gaps = 5/318 (1%)
 Frame = +3

Query: 6   KILLVGGTGYLGQHLLQEFSQSHSNT----QYNIAFTHHSSPPPQLLLNSISPTFLAFQV 173
           KIL+VGGTGYLGQHLLQ +  +++N      +++AFTHHSSPPPQ LL++I P  L FQV
Sbjct: 5   KILVVGGTGYLGQHLLQAYVHANANNGTPFAFDLAFTHHSSPPPQPLLDAI-PFSLPFQV 63

Query: 174 DLQTGHGLDTISNTFGQPDLIVNCAAQSVPRVCEMDPSTAMATNVPCSLVKWLASFQEPA 353
           DL+TG G + ISNTFGQPD++VNCAA SVPR CE+DP+TA A NVP SLVKWL SF++ +
Sbjct: 64  DLKTGFGFEAISNTFGQPDVVVNCAAISVPRACEIDPATAHAINVPSSLVKWLQSFEKRS 123

Query: 354 -LLIHLSTDQVYEGLKSFYKEDDETVPVNVYGKSKVAAEQFIVSNCTNFAILRSSIIYGP 530
            LLIHLSTDQVYEG KSFYKE+D  VPVNVYGK+KVAAEQFI  N  NFAILRSSIIYGP
Sbjct: 124 TLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENYPNFAILRSSIIYGP 183

Query: 531 QTVSPVTKSLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVVAIILALIKMWILDGKQMQ 710
           QTVSPV KSLPIQWIDG L+KG KV+FF+DEFRCP+YVKD+V IIL L   WI +GKQMQ
Sbjct: 184 QTVSPVPKSLPIQWIDGALAKGEKVEFFHDEFRCPIYVKDLVTIILTLTSQWISEGKQMQ 243

Query: 711 LLYNVCGPDRLSRAQMAEAVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQL 890
           LL NV G DR+SR QMAEAVA  RGY+ SLI  VSASSV+RGV+SP+DISMDI+RLVQ L
Sbjct: 244 LLLNVGGADRVSRLQMAEAVAEFRGYDASLIKSVSASSVDRGVKSPADISMDITRLVQTL 303

Query: 891 GVAPISYKGGVKLTLEIE 944
            + P+S+K GV+LTL  E
Sbjct: 304 RIHPVSFKDGVRLTLTTE 321


>ref|XP_002266457.1| PREDICTED: methionine adenosyltransferase 2 subunit beta isoform 1
           [Vitis vinifera] gi|297745208|emb|CBI40288.3| unnamed
           protein product [Vitis vinifera]
          Length = 318

 Score =  428 bits (1101), Expect = e-117
 Identities = 220/313 (70%), Positives = 263/313 (84%), Gaps = 1/313 (0%)
 Frame = +3

Query: 3   KKILLVGGTGYLGQHLLQEFSQSHSNTQYNIAFTHHSSPPPQLLLNSISPTFLAFQVDLQ 182
           K++L+VGGTGYLGQHLLQ FS+   +  +++AFTHHS+PP Q L+++I P   AF V+LQ
Sbjct: 4   KRVLVVGGTGYLGQHLLQGFSEIQGHP-FDLAFTHHSTPP-QPLVHAI-PHSRAFHVNLQ 60

Query: 183 TGHGLDTISNTFGQPDLIVNCAAQSVPRVCEMDPSTAMATNVPCSLVKWLASFQEP-ALL 359
           +G G + IS +FGQP ++VNCAA SVPR CEMDP+ AM+ NVP SLVKWL SF+E   LL
Sbjct: 61  SGEGFEAISRSFGQPHVVVNCAAISVPRSCEMDPAAAMSINVPSSLVKWLLSFEESNTLL 120

Query: 360 IHLSTDQVYEGLKSFYKEDDETVPVNVYGKSKVAAEQFIVSNCTNFAILRSSIIYGPQTV 539
           IHLSTDQVYEG+KSFYKE+DETVPVNVYGKSKVAAEQFI +N +N+AILRSSII GPQ +
Sbjct: 121 IHLSTDQVYEGVKSFYKEEDETVPVNVYGKSKVAAEQFISTNFSNYAILRSSIIIGPQAI 180

Query: 540 SPVTKSLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVVAIILALIKMWILDGKQMQLLY 719
           SPV KSLPIQWIDGVLS+G K+DFFYDEFRCPVYVKDVVAIILAL   WI +GKQM+L+ 
Sbjct: 181 SPVPKSLPIQWIDGVLSRGDKMDFFYDEFRCPVYVKDVVAIILALTTGWIAEGKQMKLIL 240

Query: 720 NVCGPDRLSRAQMAEAVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVA 899
           N  GPDR+SRAQ+AE VA VRGY+TSLI PVSASSV+RGV+SP DISMDI+ L+Q L ++
Sbjct: 241 NAGGPDRVSRAQIAETVADVRGYDTSLIKPVSASSVDRGVKSPVDISMDITELIQTLHIS 300

Query: 900 PISYKGGVKLTLE 938
           P S + GV+LTLE
Sbjct: 301 PTSLRVGVQLTLE 313


>ref|XP_003521916.1| PREDICTED: LOW QUALITY PROTEIN: methionine adenosyltransferase 2
           subunit beta-like [Glycine max]
          Length = 325

 Score =  422 bits (1086), Expect = e-116
 Identities = 220/320 (68%), Positives = 256/320 (80%), Gaps = 10/320 (3%)
 Frame = +3

Query: 6   KILLVGGTGYLGQHLLQEFSQSHSNTQYNI---------AFTHHSSPPPQLLLNSISPTF 158
           KIL+VGGT YLGQHLLQ ++ +++N   NI         AFTHHSSPPP  LL++I P+ 
Sbjct: 5   KILVVGGTCYLGQHLLQVYAHANANANANISGTPFVFDLAFTHHSSPPPHPLLDAI-PSS 63

Query: 159 LAFQVDLQTGHGLDTISNTFGQPDLIVNCAAQSVPRVCEMDPSTAMATNVPCSLVKWLAS 338
           L FQVDL+TG G + ISNTFGQPD++VNCAA  VPR CE+DP+TA A N+P SLVKWL S
Sbjct: 64  LPFQVDLKTGLGFEAISNTFGQPDVVVNCAAIXVPRACEIDPATAHAINLPSSLVKWLQS 123

Query: 339 FQE-PALLIHLSTDQVYEGLKSFYKEDDETVPVNVYGKSKVAAEQFIVSNCTNFAILRSS 515
           F++   LLIHLSTDQVYEG KSFYKE+D  VPVNVYGK+KVAAEQFI  NC NFAILR S
Sbjct: 124 FEKRTTLLIHLSTDQVYEGEKSFYKEEDIAVPVNVYGKTKVAAEQFISENCPNFAILRCS 183

Query: 516 IIYGPQTVSPVTKSLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVVAIILALIKMWILD 695
           IIYGPQTVSPV KSLP QWIDG L+K  KV+FF DEFRCP+YVKD+V IILAL   WI +
Sbjct: 184 IIYGPQTVSPVPKSLPNQWIDGALAKVEKVEFFQDEFRCPIYVKDLVNIILALTTQWISE 243

Query: 696 GKQMQLLYNVCGPDRLSRAQMAEAVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISR 875
           GKQMQLL NV G DR+SR QMAEAVA   GY+TSLI  +SASSV+RGV+SP+DISMDI+R
Sbjct: 244 GKQMQLLLNVGGADRVSRVQMAEAVAQFXGYDTSLIKSMSASSVDRGVKSPADISMDITR 303

Query: 876 LVQQLGVAPISYKGGVKLTL 935
           LVQ L + P+S+K GV+LTL
Sbjct: 304 LVQTLRIHPVSFKDGVRLTL 323


>ref|XP_003627624.1| Methionine adenosyltransferase 2 subunit beta [Medicago truncatula]
           gi|355521646|gb|AET02100.1| Methionine
           adenosyltransferase 2 subunit beta [Medicago truncatula]
          Length = 317

 Score =  419 bits (1078), Expect = e-115
 Identities = 217/315 (68%), Positives = 252/315 (80%), Gaps = 1/315 (0%)
 Frame = +3

Query: 3   KKILLVGGTGYLGQHLLQEFSQSHSNTQYNIAFTHHSSPPPQLLLNSISPTFLAFQVDLQ 182
           KKIL+VGGTGYLGQHLLQ +   +SN    +AFT+HSSP  Q LL++  P   +FQVDL+
Sbjct: 4   KKILIVGGTGYLGQHLLQSY---YSNQSLTVAFTYHSSPLLQPLLDAF-PDSQSFQVDLK 59

Query: 183 TGHGLDTISNTFGQPDLIVNCAAQSVPRVCEMDPSTAMATNVPCSLVKWLASF-QEPALL 359
           +G G D ISN FGQPD++VNCAA SVPR CE DP TA A NVP SLVKWL SF Q   LL
Sbjct: 60  SGIGFDAISNAFGQPDVVVNCAAISVPRACENDPDTANAINVPSSLVKWLQSFKQNSTLL 119

Query: 360 IHLSTDQVYEGLKSFYKEDDETVPVNVYGKSKVAAEQFIVSNCTNFAILRSSIIYGPQTV 539
           IHLSTDQVYEG KSFYKE+D  +PVNVYGK+KVAAE+FI  N  NFAILRSSIIYGPQTV
Sbjct: 120 IHLSTDQVYEGEKSFYKEEDIPIPVNVYGKTKVAAEKFISENFPNFAILRSSIIYGPQTV 179

Query: 540 SPVTKSLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVVAIILALIKMWILDGKQMQLLY 719
           SPV KSLPIQWID  LSK  KV+FF+DEFRCP++VKD+V IILAL   W+ +GKQMQLL 
Sbjct: 180 SPVPKSLPIQWIDSALSKREKVNFFHDEFRCPIFVKDLVTIILALTSQWLSEGKQMQLLL 239

Query: 720 NVCGPDRLSRAQMAEAVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVA 899
           N  GPDR+SR +MA+AVA  RGY+TSLI  VSAS+V+RGV+SP+DISMDI+RLVQ L + 
Sbjct: 240 NAGGPDRVSRVEMADAVAQFRGYDTSLIKAVSASTVDRGVKSPADISMDITRLVQTLNIN 299

Query: 900 PISYKGGVKLTLEIE 944
           P+S+K GVKLTL  E
Sbjct: 300 PVSFKDGVKLTLTTE 314


>ref|XP_002453079.1| hypothetical protein SORBIDRAFT_04g037940 [Sorghum bicolor]
           gi|241932910|gb|EES06055.1| hypothetical protein
           SORBIDRAFT_04g037940 [Sorghum bicolor]
          Length = 325

 Score =  416 bits (1068), Expect = e-114
 Identities = 208/315 (66%), Positives = 259/315 (82%), Gaps = 1/315 (0%)
 Frame = +3

Query: 3   KKILLVGGTGYLGQHLLQEFSQSHSNTQYNIAFTHHSSPPPQLLLNSISPTFLAFQVDLQ 182
           K++L+VGG+GYLGQHLL   + S +  + ++AFTHHS  PPQ LL+++ P+  AF+ DL+
Sbjct: 12  KRVLVVGGSGYLGQHLL---AASSAADRLDVAFTHHSPAPPQPLLDAL-PSVRAFRADLR 67

Query: 183 TGHGLDTISNTFGQPDLIVNCAAQSVPRVCEMDPSTAMATNVPCSLVKWLASF-QEPALL 359
           +G GL+ IS +FGQP ++VNCAA SVPR CEMDP  AMATNVP SLV WL SF  E +LL
Sbjct: 68  SGDGLEAISASFGQPHVVVNCAAMSVPRACEMDPPAAMATNVPSSLVNWLLSFGNEDSLL 127

Query: 360 IHLSTDQVYEGLKSFYKEDDETVPVNVYGKSKVAAEQFIVSNCTNFAILRSSIIYGPQTV 539
           IHLSTDQVYEG+KSFYKE+DET PVN+YGKSKVAAE+ IV  C+N+AILRSSIIYGPQT+
Sbjct: 128 IHLSTDQVYEGVKSFYKEEDETKPVNMYGKSKVAAEKLIVERCSNYAILRSSIIYGPQTI 187

Query: 540 SPVTKSLPIQWIDGVLSKGVKVDFFYDEFRCPVYVKDVVAIILALIKMWILDGKQMQLLY 719
           SPV KSLPIQWIDGVLS+G +V+FF DEFRCPVYVKD+V +IL+L K W+ +G+++Q+L 
Sbjct: 188 SPVAKSLPIQWIDGVLSQGQQVEFFNDEFRCPVYVKDMVDVILSLTKTWLSNGEKVQVLL 247

Query: 720 NVCGPDRLSRAQMAEAVASVRGYNTSLINPVSASSVNRGVQSPSDISMDISRLVQQLGVA 899
           NV GPDR+SR QMAE+VA VRGY+  +I  VSASSVNRGV SP DISMDI++L Q LG+ 
Sbjct: 248 NVGGPDRVSRLQMAESVAVVRGYDPRIIKSVSASSVNRGVASPPDISMDITKLTQILGIK 307

Query: 900 PISYKGGVKLTLEIE 944
           PIS++ GV+ TL+ E
Sbjct: 308 PISFRDGVRSTLDAE 322


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