BLASTX nr result

ID: Coptis25_contig00022464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022464
         (854 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539881.1| PREDICTED: uncharacterized protein LOC100787...   114   3e-23
gb|ACU19245.1| unknown [Glycine max]                                  114   3e-23
ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|2...   108   1e-21
ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246...   108   2e-21
gb|ABK92874.1| unknown [Populus trichocarpa]                          107   4e-21

>ref|XP_003539881.1| PREDICTED: uncharacterized protein LOC100787042 [Glycine max]
          Length = 160

 Score =  114 bits (285), Expect = 3e-23
 Identities = 54/102 (52%), Positives = 70/102 (68%)
 Frame = -2

Query: 730 MSKAVGALVCLLIVIMDVXXXXXXXXXXXAQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 551
           M++  G  +CLLI++MDV           AQNKVKHLRL IFEC EPSH AFM       
Sbjct: 1   MARVAGIFLCLLILVMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAV 60

Query: 550 XXXXAHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSW 425
               AH  ANLLGGC C+CS++EF+++S+N+QL+TACL+L+W
Sbjct: 61  LLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTACLILTW 102


>gb|ACU19245.1| unknown [Glycine max]
          Length = 160

 Score =  114 bits (285), Expect = 3e-23
 Identities = 54/102 (52%), Positives = 70/102 (68%)
 Frame = -2

Query: 730 MSKAVGALVCLLIVIMDVXXXXXXXXXXXAQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 551
           M++  G  +CLLI++MDV           AQNKVKHLRL IFEC EPSH AFM       
Sbjct: 1   MARVAGIFLCLLILVMDVAAGILGFEAEIAQNKVKHLRLWIFECREPSHQAFMLGLGAAV 60

Query: 550 XXXXAHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSW 425
               AH  ANLLGGC C+CS++EF+++S+N+QL+TACL+L+W
Sbjct: 61  LLGLAHAIANLLGGCNCICSQQEFEKASSNRQLSTACLILTW 102


>ref|XP_002316703.1| predicted protein [Populus trichocarpa] gi|222859768|gb|EEE97315.1|
           predicted protein [Populus trichocarpa]
          Length = 163

 Score =  108 bits (271), Expect = 1e-21
 Identities = 55/102 (53%), Positives = 66/102 (64%)
 Frame = -2

Query: 730 MSKAVGALVCLLIVIMDVXXXXXXXXXXXAQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 551
           M+K +G LVCLLI+ +DV           AQNKVKHL++ IF+C +PSH AF        
Sbjct: 1   MAKNIGFLVCLLIMALDVVAGILGIEAEMAQNKVKHLKMWIFDCRDPSHQAFKLGLAAVI 60

Query: 550 XXXXAHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSW 425
               AHV A LLGGC CMCSKEEF+++SANKQLA A L  SW
Sbjct: 61  LLSLAHVVATLLGGCTCMCSKEEFNKASANKQLAVASLFFSW 102


>ref|XP_002281185.1| PREDICTED: uncharacterized protein LOC100246598 [Vitis vinifera]
           gi|297739331|emb|CBI28982.3| unnamed protein product
           [Vitis vinifera]
          Length = 168

 Score =  108 bits (269), Expect = 2e-21
 Identities = 53/102 (51%), Positives = 65/102 (63%)
 Frame = -2

Query: 730 MSKAVGALVCLLIVIMDVXXXXXXXXXXXAQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 551
           M+K  G  VC+LIV MDV           AQNKVKHLRL IFEC EPS DAF        
Sbjct: 1   MAKLCGLFVCMLIVAMDVGAGILGIEAEVAQNKVKHLRLWIFECREPSEDAFKLGLAAAA 60

Query: 550 XXXXAHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSW 425
               AH+ +NLLGGC+C+CS+E+F ++S N+QL+  CLV SW
Sbjct: 61  LLAFAHILSNLLGGCMCICSQEDFQKASPNRQLSVVCLVFSW 102


>gb|ABK92874.1| unknown [Populus trichocarpa]
          Length = 168

 Score =  107 bits (266), Expect = 4e-21
 Identities = 55/102 (53%), Positives = 64/102 (62%)
 Frame = -2

Query: 730 MSKAVGALVCLLIVIMDVXXXXXXXXXXXAQNKVKHLRLLIFECTEPSHDAFMXXXXXXX 551
           M K  G LVCLLIV MDV           AQNKVKHLRL IFEC +PS DAF        
Sbjct: 1   MVKIGGVLVCLLIVAMDVVAGILGIQADIAQNKVKHLRLWIFECRDPSQDAFKLGLAAAG 60

Query: 550 XXXXAHVTANLLGGCICMCSKEEFDRSSANKQLATACLVLSW 425
               AHV ANLLGGC+C+CS+EE  R+S N+QL+ AC + +W
Sbjct: 61  VLGLAHVIANLLGGCMCICSQEELQRASPNRQLSVACFLFTW 102


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