BLASTX nr result

ID: Coptis25_contig00022462 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022462
         (859 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADE77121.1| unknown [Picea sitchensis]                              57   4e-06
ref|XP_003591234.1| ABC transporter family protein [Medicago tru...    57   7e-06
ref|NP_001190205.1| ABC transporter I family member 20 [Arabidop...    57   7e-06
ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyr...    57   7e-06
ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis...    57   7e-06

>gb|ADE77121.1| unknown [Picea sitchensis]
          Length = 329

 Score = 57.4 bits (137), Expect = 4e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  QWRRDVAFAGFDIPIQMDIAAEKMIFGV 3
           +WRRDVAFAGFD+P+QMDI+AEKMIFGV
Sbjct: 101 EWRRDVAFAGFDVPLQMDISAEKMIFGV 128


>ref|XP_003591234.1| ABC transporter family protein [Medicago truncatula]
           gi|355480282|gb|AES61485.1| ABC transporter family
           protein [Medicago truncatula]
          Length = 333

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  QWRRDVAFAGFDIPIQMDIAAEKMIFGV 3
           +WRRDVAFAGF++PIQMDI+AEKMIFGV
Sbjct: 104 EWRRDVAFAGFEVPIQMDISAEKMIFGV 131


>ref|NP_001190205.1| ABC transporter I family member 20 [Arabidopsis thaliana]
           gi|332003070|gb|AED90453.1| ABC transporter I family
           member 20 [Arabidopsis thaliana]
          Length = 354

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  QWRRDVAFAGFDIPIQMDIAAEKMIFGV 3
           +WRRDVAFAGF++PIQMDI+AEKMIFGV
Sbjct: 104 EWRRDVAFAGFEVPIQMDISAEKMIFGV 131


>ref|XP_002873045.1| non-intrinsic abc protein 9 [Arabidopsis lyrata subsp. lyrata]
           gi|297318882|gb|EFH49304.1| non-intrinsic abc protein 9
           [Arabidopsis lyrata subsp. lyrata]
          Length = 328

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  QWRRDVAFAGFDIPIQMDIAAEKMIFGV 3
           +WRRDVAFAGF++PIQMDI+AEKMIFGV
Sbjct: 104 EWRRDVAFAGFEVPIQMDISAEKMIFGV 131


>ref|NP_195847.1| ABC transporter I family member 20 [Arabidopsis thaliana]
           gi|75335697|sp|Q9LZ98.1|AB20I_ARATH RecName: Full=ABC
           transporter I family member 20; Short=ABC transporter
           ABCI.20; Short=AtABCI20; AltName: Full=GCN-related
           protein 3; AltName: Full=Non-intrinsic ABC protein 9
           gi|13899119|gb|AAK48981.1|AF370554_1 ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|7406423|emb|CAB85532.1| ABC transporter-like protein
           [Arabidopsis thaliana] gi|21554262|gb|AAM63337.1| ABC
           transporter-like protein [Arabidopsis thaliana]
           gi|30984550|gb|AAP42738.1| At5g02270 [Arabidopsis
           thaliana] gi|332003069|gb|AED90452.1| ABC transporter I
           family member 20 [Arabidopsis thaliana]
          Length = 328

 Score = 56.6 bits (135), Expect = 7e-06
 Identities = 24/28 (85%), Positives = 28/28 (100%)
 Frame = -3

Query: 86  QWRRDVAFAGFDIPIQMDIAAEKMIFGV 3
           +WRRDVAFAGF++PIQMDI+AEKMIFGV
Sbjct: 104 EWRRDVAFAGFEVPIQMDISAEKMIFGV 131


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