BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022461
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|2...    80   1e-18
ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|2...    70   3e-15
ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus ...    72   3e-15
ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|2...    67   6e-15
ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g...    72   2e-14

>ref|XP_002326902.1| predicted protein [Populus trichocarpa] gi|222835217|gb|EEE73652.1|
           predicted protein [Populus trichocarpa]
          Length = 416

 Score = 80.5 bits (197), Expect(2) = 1e-18
 Identities = 49/120 (40%), Positives = 67/120 (55%), Gaps = 3/120 (2%)
 Frame = -1

Query: 356 QI*HLMLE---ASINSKKGIIEDTELVTIVNNVLLLHEGMLSNFKISNFLNRGCSDYDRW 186
           QI HL+ +   ASI S+   I    LV I++NVLLLH G +  FK+S+    G SD DRW
Sbjct: 44  QIPHLVFDTQCASITSQDQTIAKNNLVNIIDNVLLLHNGPIYKFKLSHRDLLGVSDIDRW 103

Query: 185 IAFVSLKNTLTHLVLVLKRSDSYQVPTCLFCCQNLQELKLGRCELKLSSQFNGFNRLTFL 6
           I  +S + +    VL + +   Y++P+CLF  +NL  L+L  C LK    F GF  L  L
Sbjct: 104 ILHLS-RGSTKEFVLEIWKGQRYKLPSCLFSFENLTHLELFNCLLKPPPAFKGFRNLKSL 162



 Score = 37.7 bits (86), Expect(2) = 1e-18
 Identities = 19/40 (47%), Positives = 23/40 (57%)
 Frame = -2

Query: 487 LDRFSDLHDXXXXXXXXXXXIRDAVKTSLLSRSWKHRWSQ 368
           LDR S L             IRDAV+TS LSR W+++WSQ
Sbjct: 5   LDRISSLPGHVLDQILSVLPIRDAVRTSALSRKWRYQWSQ 44


>ref|XP_002302466.1| predicted protein [Populus trichocarpa] gi|222844192|gb|EEE81739.1|
           predicted protein [Populus trichocarpa]
          Length = 505

 Score = 70.5 bits (171), Expect(2) = 3e-15
 Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
 Frame = -1

Query: 356 QI*HLMLEA---SINSKKGIIEDTELVTIVNNVLLLHEGMLSNFKISNFLNRGCSDYDRW 186
           QI H++ ++   SI+S+       +LV I++++LLLH G +  FK+S+      SD DRW
Sbjct: 133 QIPHIVFDSQGISISSQDQTTIKNKLVNIIDHILLLHNGPIYKFKLSHCDLLAVSDIDRW 192

Query: 185 IAFVSLKNTLTHLVLVLKRSDSYQVPTCLFCCQNLQELKLGRCELKLSSQFNGFNRL 15
           I  +S + +    VL + +   Y++P+CLF  +NL  L+L  C LK    F GF  L
Sbjct: 193 ILHLS-RGSTKEFVLEIWKGQQYKLPSCLFSFKNLVYLELFNCLLKPPLAFKGFRNL 248



 Score = 36.6 bits (83), Expect(2) = 3e-15
 Identities = 18/40 (45%), Positives = 22/40 (55%)
 Frame = -2

Query: 487 LDRFSDLHDXXXXXXXXXXXIRDAVKTSLLSRSWKHRWSQ 368
           LDR S L             IRDAV+TS L R W+++WSQ
Sbjct: 94  LDRISSLPGHVLGQILSLLPIRDAVRTSALKRKWRYKWSQ 133


>ref|XP_002514537.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223546141|gb|EEF47643.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 421

 Score = 72.0 bits (175), Expect(2) = 3e-15
 Identities = 36/97 (37%), Positives = 57/97 (58%)
 Frame = -1

Query: 314 KGIIEDTELVTIVNNVLLLHEGMLSNFKISNFLNRGCSDYDRWIAFVSLKNTLTHLVLVL 135
           KG++E + LV  ++  L LH G +  F++S    + C D D+W+ F+S ++ +  LVL L
Sbjct: 63  KGVLE-SRLVKFISRALFLHHGPIHKFQLSTSYLQCCPDIDQWLLFLS-RSDIKELVLEL 120

Query: 134 KRSDSYQVPTCLFCCQNLQELKLGRCELKLSSQFNGF 24
              + ++VP+CLF C+ L  L+L RCE      F GF
Sbjct: 121 GEGEWFRVPSCLFNCKKLTRLELTRCEFDPPPNFKGF 157



 Score = 34.7 bits (78), Expect(2) = 3e-15
 Identities = 18/44 (40%), Positives = 23/44 (52%)
 Frame = -2

Query: 502 GSVENLDRFSDLHDXXXXXXXXXXXIRDAVKTSLLSRSWKHRWS 371
           G  E  D  +DL             IRDAVKTS+LS  W++RW+
Sbjct: 2   GDYEVPDFITDLPSSIIESILTRLPIRDAVKTSILSTKWRYRWA 45


>ref|XP_002315980.1| predicted protein [Populus trichocarpa] gi|222865020|gb|EEF02151.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 67.4 bits (163), Expect(2) = 6e-15
 Identities = 35/99 (35%), Positives = 57/99 (57%)
 Frame = -1

Query: 320 SKKGIIEDTELVTIVNNVLLLHEGMLSNFKISNFLNRGCSDYDRWIAFVSLKNTLTHLVL 141
           S + ++E+  +V  +   L LH+G +  F++S    + C D D+WI F+S ++ +  LVL
Sbjct: 61  SDRPVVENC-MVNFITRALFLHQGPIHKFQLSTSYLQCCPDIDQWILFLS-RSDIKELVL 118

Query: 140 VLKRSDSYQVPTCLFCCQNLQELKLGRCELKLSSQFNGF 24
            L   + ++VP+CLF C+ L  L+L RCE      F GF
Sbjct: 119 ELGEGEWFRVPSCLFNCKKLTCLELFRCEFDPPPTFKGF 157



 Score = 38.5 bits (88), Expect(2) = 6e-15
 Identities = 19/44 (43%), Positives = 25/44 (56%)
 Frame = -2

Query: 502 GSVENLDRFSDLHDXXXXXXXXXXXIRDAVKTSLLSRSWKHRWS 371
           G VE+ D  SDL             IRDAV+TS+LS  W++RW+
Sbjct: 2   GDVEDPDLISDLPQSILESILTRLPIRDAVRTSILSSKWRYRWT 45


>ref|XP_002270150.2| PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Vitis
           vinifera]
          Length = 414

 Score = 72.4 bits (176), Expect(2) = 2e-14
 Identities = 39/96 (40%), Positives = 54/96 (56%)
 Frame = -1

Query: 293 ELVTIVNNVLLLHEGMLSNFKISNFLNRGCSDYDRWIAFVSLKNTLTHLVLVLKRSDSYQ 114
           +L   +  VLLLH G +  F+I+    R C D D+WI F+S +N +  ++L L   + + 
Sbjct: 62  KLKKFITQVLLLHAGPIHKFQITTSNLRICPDIDQWILFLS-RNDVKEILLELGECEWFT 120

Query: 113 VPTCLFCCQNLQELKLGRCELKLSSQFNGFNRLTFL 6
           VP+CLF CQ L  L+L RCEL     F GF  L  L
Sbjct: 121 VPSCLFSCQKLTRLELVRCELHPPPTFKGFLHLKIL 156



 Score = 31.6 bits (70), Expect(2) = 2e-14
 Identities = 11/18 (61%), Positives = 16/18 (88%)
 Frame = -2

Query: 424 RDAVKTSLLSRSWKHRWS 371
           R+AV+TS+LS  W++RWS
Sbjct: 28  REAVRTSILSSKWRYRWS 45