BLASTX nr result

ID: Coptis25_contig00022440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022440
         (1852 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256...   572   e-160
emb|CAD98760.1| MYB transcription factor R3 type [Populus tremul...   505   e-140
ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|2...   504   e-140
ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|22352...   498   e-138
ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081...   496   e-137

>ref|XP_002270472.1| PREDICTED: uncharacterized protein LOC100256181 [Vitis vinifera]
          Length = 558

 Score =  572 bits (1473), Expect = e-160
 Identities = 302/517 (58%), Positives = 358/517 (69%), Gaps = 3/517 (0%)
 Frame = +1

Query: 295  TTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVQVFKGKSWKKIAEFFPDRSEVQCLHRWQ 474
            TTSPSHRRT+GPIRRAKGGWTPQED+TLR AV  FKGKSWKKIAEFFPDRSEVQCLHRWQ
Sbjct: 45   TTSPSHRRTTGPIRRAKGGWTPQEDDTLRTAVAYFKGKSWKKIAEFFPDRSEVQCLHRWQ 104

Query: 475  KVLNPELIKGPWTQEEDDKIIGLVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMIK 654
            KVLNPEL+KGPWTQEEDDKI  LVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNP IK
Sbjct: 105  KVLNPELVKGPWTQEEDDKITELVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIK 164

Query: 655  KDAWTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLP 834
            KDAWTL+EEL+LMNA   +GNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATG+LP
Sbjct: 165  KDAWTLDEELALMNAHSKHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLP 224

Query: 835  PVPKTGI-TGTKDTSRLMATGQISGCSNRGSDSTDQQVLETEGLCKLDEDFEDEFNFASQ 1011
            PV K+G   G KDT+R  A G++ GCSN+GS+ST Q    T  LCKL+ED +D+   ++ 
Sbjct: 225  PVVKSGFQNGAKDTNRTNAPGKLLGCSNKGSESTAQTSSGTTDLCKLEEDSKDQLESSAP 284

Query: 1012 TIDTDSSAGTMLASPSKSDDVECKLQASNSEFGCSSSACATNPMIFGSKGKTDVNDLNGT 1191
              D   S        + S+D +CK   S  +  C +S            G  D + + GT
Sbjct: 285  LQDAGVSLSVPPNESADSEDAQCKPYLSKIDCSCGNSESILRFEKCRINGNIDESKVVGT 344

Query: 1192 PLQSRIPAFGSLYYEPPQLENCDIPLSSTLSDTYYSFQKMYSTNLDMSPSSFATPPRVEE 1371
            PLQ  IP + SLYYEPP+LE+C +PL S L    +  Q    T+  MSP SF TPP V+ 
Sbjct: 345  PLQLGIPTYDSLYYEPPRLESC-VPLDSDLISKCW-MQYECDTSPFMSPISFFTPPCVKG 402

Query: 1372 PGFGTLNAESVLRNAAKSFTNTPSILRKRKAESLGVLPLNRVGKTKVIEVLDSSHTPEEK 1551
                  + +S+L+NAA++F NTPSILRKRK E+   L   ++GK     V DS H  +E+
Sbjct: 403  SSLSMQSPQSILKNAARTFPNTPSILRKRKTEAQTPLLPTKIGKADQEAVNDSFHASDEQ 462

Query: 1552 ERTENNQDKIGYEKARLCQSPAFCGNRTTELYDEKDFNASPPYRLWSKRTAVFKSLDR-- 1725
            ERT N+ +K        C SPA  G+ +  L + K FNASPPYRL SKRTAVFKS+++  
Sbjct: 463  ERTGNSLEKSVSRDGSSCDSPACHGDNSIGLCNGKAFNASPPYRLRSKRTAVFKSVEKQL 522

Query: 1726 DFTLDRGKFESQAQSSLVVKSNQSFTESYSQTAKMGV 1836
            +F  DR K +   +S+   K N    E   +  KMGV
Sbjct: 523  EFAFDREKCDGNTKST--EKGNSPVAEDCLRATKMGV 557


>emb|CAD98760.1| MYB transcription factor R3 type [Populus tremula x Populus
            tremuloides]
          Length = 530

 Score =  505 bits (1301), Expect = e-140
 Identities = 280/517 (54%), Positives = 339/517 (65%), Gaps = 3/517 (0%)
 Frame = +1

Query: 295  TTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVQVFKGKSWKKIAEFFPDRSEVQCLHRWQ 474
            T SP++RRT+GPIRRAKGGWTP+EDETLR AV  ++GKSWKKIAEFFPDRSEVQCLHRWQ
Sbjct: 44   TVSPTNRRTTGPIRRAKGGWTPEEDETLRTAVATYRGKSWKKIAEFFPDRSEVQCLHRWQ 103

Query: 475  KVLNPELIKGPWTQEEDDKIIGLVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMIK 654
            KVL+PEL+KGPWTQEEDDKI+ LV+KYGPTKWSVIAK+LPGRIGKQCRERWHNHLNP IK
Sbjct: 104  KVLDPELVKGPWTQEEDDKIVELVAKYGPTKWSVIAKALPGRIGKQCRERWHNHLNPDIK 163

Query: 655  KDAWTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLP 834
            KDAWTLEEEL+LMNA R YGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYL+TG+LP
Sbjct: 164  KDAWTLEEELALMNAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLP 223

Query: 835  PVPKTGI-TGTKDTSRLMATGQISGCSNRGSDSTDQQVLETEGLCKLDEDFEDEFNFASQ 1011
            P+ K G   GTKDT++      +     + SDS  Q    T  +CKLDED +D+   ++ 
Sbjct: 224  PISKNGFQNGTKDTNKSAVMKTM-----KESDSAAQTSSGTTDICKLDEDGKDQLE-STL 277

Query: 1012 TIDTDSSAGTMLASPSKSDDVECKLQASNSEFGCSSSACATNPMIFGSKGKTDVNDLNGT 1191
             +D  +S+  +    + S D+ C          C S            K +   +   G+
Sbjct: 278  VLDVAASSSALPNEYADSVDLRC----------CDSE--------LQQKFEDHQDKGIGS 319

Query: 1192 PLQSRIPAFGSLYYEPPQLENCDIPLSSTLSDTYYSFQKMYSTNLDMSPSSFATPPRVEE 1371
             LQ     +GSLYYEPP +E  D   S+T      S Q   ++    SP  F TPP V+ 
Sbjct: 320  GLQFDRSTYGSLYYEPPLVEQLDSYPSNT-----GSVQHENNSCPVSSPIIFFTPPCVKS 374

Query: 1372 PGFGTLNAESVLRNAAKSFTNTPSILRKRKAESLGVLPLNRVGKTKVIEVLDSSHTPEEK 1551
                  + ES+LR AA SF NTPSI RKRK   + +LP +++GK     V D      E 
Sbjct: 375  RDLSAQSPESILRIAAMSFPNTPSIFRKRKTAQVDLLP-SKIGKAGEETVKDRLDMSVEH 433

Query: 1552 ERTENNQDKIGYEKARLCQSPAFCGNRTTELYDEKDFNASPPYRLWSKRTAVFKSLDR-- 1725
            E+ EN  +K   +   LC+SPA  GN T    D K FNASPPYRL SKRTAVFKS++R  
Sbjct: 434  EKIENTLEKTAAQDGSLCESPASLGNGTIRPND-KPFNASPPYRLRSKRTAVFKSVERQL 492

Query: 1726 DFTLDRGKFESQAQSSLVVKSNQSFTESYSQTAKMGV 1836
            +FT ++G+ +    + L VK     TE  S+  KMGV
Sbjct: 493  EFTFEKGRSDGTKPTRLSVKGGSPVTEDCSRATKMGV 529


>ref|XP_002308158.1| predicted protein [Populus trichocarpa] gi|222854134|gb|EEE91681.1|
            predicted protein [Populus trichocarpa]
          Length = 530

 Score =  504 bits (1299), Expect = e-140
 Identities = 279/518 (53%), Positives = 337/518 (65%), Gaps = 4/518 (0%)
 Frame = +1

Query: 295  TTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVQVFKGKSWKKIAEFFPDRSEVQCLHRWQ 474
            T SP++RRT+GPIRRAKGGWTP+EDETLR AV  +KGKSWKKIAEFFPDRSEVQCLHRWQ
Sbjct: 44   TVSPTNRRTTGPIRRAKGGWTPEEDETLRTAVATYKGKSWKKIAEFFPDRSEVQCLHRWQ 103

Query: 475  KVLNPELIKGPWTQEEDDKIIGLVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMIK 654
            KVL+PEL+KGPWTQEEDDKI+ LV+KYGPTKWSVIAK+LPGRIGKQCRERWHNHLNP IK
Sbjct: 104  KVLDPELVKGPWTQEEDDKIVELVAKYGPTKWSVIAKALPGRIGKQCRERWHNHLNPDIK 163

Query: 655  KDAWTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLP 834
            KDAWTLEEEL+LMNA R YGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYL+TG+LP
Sbjct: 164  KDAWTLEEELALMNAHRIYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLSTGKLP 223

Query: 835  PVPKTGI-TGTKDTSRLMATGQISGCSNRGSDSTDQQVLETEGLCKLDEDFEDEFNFASQ 1011
            P+ K G   GTKDT++      +     + SDS  Q    T  +CKLDED +D+   ++ 
Sbjct: 224  PISKNGFQNGTKDTNKSAVMKTM-----KESDSAAQTSSGTTDICKLDEDGKDQLE-STL 277

Query: 1012 TIDTDSSAGTMLASPSKSDDVECKLQASNSEFGCSSSACATNPMIFGSKGKTDVNDLN-G 1188
             +D  +S+  +    + S D+ C    S  +F                    D  D   G
Sbjct: 278  VLDVAASSSVLPNEYADSVDLSCCDSESQQKF-------------------EDHQDKGIG 318

Query: 1189 TPLQSRIPAFGSLYYEPPQLENCDIPLSSTLSDTYYSFQKMYSTNLDMSPSSFATPPRVE 1368
            + LQ     +GSLYYEPP +E  D     +      S Q   ++    SP  F TPP V+
Sbjct: 319  SGLQFDRSTYGSLYYEPPLVEQLD-----SYPSNMGSVQHENNSCPVSSPIIFFTPPCVK 373

Query: 1369 EPGFGTLNAESVLRNAAKSFTNTPSILRKRKAESLGVLPLNRVGKTKVIEVLDSSHTPEE 1548
                   + ES+LR AA SF NTPSI RKRK   + +LP +++GK     V D      E
Sbjct: 374  SRDLSAQSPESILRIAAMSFPNTPSIFRKRKTAQVDLLP-SKIGKVGEETVKDRLDMSVE 432

Query: 1549 KERTENNQDKIGYEKARLCQSPAFCGNRTTELYDEKDFNASPPYRLWSKRTAVFKSLDR- 1725
             E+ EN  +K   +   LC+SPA  GN T    D K FNASPPYRL SKRTAVFKS++R 
Sbjct: 433  HEKIENTLEKTAAQDGSLCESPASLGNGTIRPND-KPFNASPPYRLRSKRTAVFKSVERQ 491

Query: 1726 -DFTLDRGKFESQAQSSLVVKSNQSFTESYSQTAKMGV 1836
             +FT ++G+ +    + L VK     +E  S+  KMGV
Sbjct: 492  LEFTFEKGRSDGTKPTRLSVKRGSPVSEDCSRATKMGV 529


>ref|XP_002532327.1| myb3r3, putative [Ricinus communis] gi|223527970|gb|EEF30054.1|
            myb3r3, putative [Ricinus communis]
          Length = 584

 Score =  498 bits (1283), Expect = e-138
 Identities = 275/528 (52%), Positives = 334/528 (63%), Gaps = 14/528 (2%)
 Frame = +1

Query: 295  TTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVQVFKGKSWKKIAEFFPDRSEVQCLHRWQ 474
            T SP+HRRT+GPIRRAKGGWT +EDETLRNAV  FKGKSWKKIAEFFPDRSEVQCLHRWQ
Sbjct: 60   TASPTHRRTTGPIRRAKGGWTLEEDETLRNAVAAFKGKSWKKIAEFFPDRSEVQCLHRWQ 119

Query: 475  KVLNPELIKGPWTQEEDDKIIGLVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMIK 654
            KVLNP+L+KGPWTQEEDDKI  LV+KYGPTKWSVIAKSLPGRIGKQCRERWHNHLNP IK
Sbjct: 120  KVLNPDLVKGPWTQEEDDKITELVAKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPDIK 179

Query: 655  KDAWTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLP 834
            KDAWTLEEE++LMNA R +GNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATG+LP
Sbjct: 180  KDAWTLEEEMALMNAHRIHGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGKLP 239

Query: 835  PVPKTGIT-GTKDTSRLMATGQISGCSN-----------RGSDSTDQQVLETEGLCKLDE 978
            PV K+ I   ++    +   G   G  +           + SDST Q    T  +CKL+E
Sbjct: 240  PVAKSDIVFSSRKLPSVAKNGSQDGIKDINNKHSVFKMYKESDSTAQTSSGTTDVCKLEE 299

Query: 979  DFEDEFNFASQTIDTDSSAGTMLASPSKSDDVECKLQASNSEFGCSSSACATNPMIFGSK 1158
            D +++   +    D  +S+  +    + S+ VECK  +  ++  C +S         G  
Sbjct: 300  DSKNQLESSLLVRDLATSSSFLPNESADSEGVECKPNSFTADLSCCNSEPLRKCESCGIN 359

Query: 1159 GKTDVNDLNGTPLQSRIPAFGSLYYEPPQLENCDIPLSSTLSDTYYSFQKMYSTNLDMSP 1338
             +       G+ L     ++GSLYYEPPQL  C       L    +  Q  Y ++   SP
Sbjct: 360  NEIGEGKFIGSQLHFGTSSYGSLYYEPPQLGICTPIHVDPL--IVHHVQHEYCSSPIASP 417

Query: 1339 SSFATPPRVEEPGFGTLNAESVLRNAAKSFTNTPSILRKRKAESLGVLPLNRVGKTKVIE 1518
             SF TPP V+     + + ES+LR AAKSF NTPSI RKRK  S   +  ++  K     
Sbjct: 418  ISFFTPPCVKNSDLSSQSPESILRIAAKSFPNTPSIFRKRKVGSQVHMLQSKSSKVSQEP 477

Query: 1519 VLDSSHTPEEKERTENNQDKIGYEKARLCQSPAFCGNRTTELYDEKDFNASPPYRLWSKR 1698
            V         + RTE   +K   +   L  SP  C + +T   ++K FNASPPYRL SKR
Sbjct: 478  VEGRLQVSNGQGRTEYTSEKTESQDGSLSHSP--CRDNSTIRPNDKAFNASPPYRLKSKR 535

Query: 1699 TAVFKSLDR--DFTLDRGKFESQAQSSLVVKSNQSFTESYSQTAKMGV 1836
            TAVFKS++R  +FT DR + +S     L    +   TE  S  AKMG+
Sbjct: 536  TAVFKSVERQLEFTFDRDRCDSAKSVGLSANGSSIVTEDCSHAAKMGI 583


>ref|XP_003551473.1| PREDICTED: uncharacterized protein LOC778081 [Glycine max]
          Length = 572

 Score =  496 bits (1276), Expect = e-137
 Identities = 280/510 (54%), Positives = 336/510 (65%), Gaps = 25/510 (4%)
 Frame = +1

Query: 295  TTSPSHRRTSGPIRRAKGGWTPQEDETLRNAVQVFKGKSWKKIAEFFPDRSEVQCLHRWQ 474
            +TSPSHRRT+GPIRRAKGGWT QEDETLRNAV VFKGKSWKKIAEFFPDRSEVQCLHRWQ
Sbjct: 57   STSPSHRRTTGPIRRAKGGWTAQEDETLRNAVAVFKGKSWKKIAEFFPDRSEVQCLHRWQ 116

Query: 475  KVLNPELIKGPWTQEEDDKIIGLVSKYGPTKWSVIAKSLPGRIGKQCRERWHNHLNPMIK 654
            KVLNPEL+KGPWTQEEDDKI+ LVSKYGPTKWS+IAKSLPGRIGKQCRERWHNHLNP IK
Sbjct: 117  KVLNPELVKGPWTQEEDDKIVELVSKYGPTKWSLIAKSLPGRIGKQCRERWHNHLNPDIK 176

Query: 655  KDAWTLEEELSLMNAQRTYGNKWAEIAKVLPGRTDNSIKNHWNSSLKKKLDFYLATGRLP 834
            KDAWTLEEELSLMNA R +GNKWAEIAKVL GRTDN+IKNHWNSSLKKKLDFYLATGRLP
Sbjct: 177  KDAWTLEEELSLMNAHRIHGNKWAEIAKVLHGRTDNAIKNHWNSSLKKKLDFYLATGRLP 236

Query: 835  PVPKTG-ITGTKDTSRLMATGQISGCSNRGSDSTDQQVLETEGLCKLDEDFEDEFNFASQ 1011
            P+PK       KDT R  A+  I GCSN+  ++  +   ET  + KLD+   ++F  +  
Sbjct: 237  PIPKNSPQVPVKDTIRRSASKSILGCSNKELNAAVETSSETTSISKLDDRGRNQFESSGT 296

Query: 1012 TIDTDSSAGTMLASPSKSDDVECKLQASNSEFGCSSS-------------ACATNPMIFG 1152
              +    +       + SD VECK  +SN +  CS+S               + N  I G
Sbjct: 297  VREVGDCSSVPANESADSDCVECKPGSSNIDLSCSNSEQLSRANFGTTFGLISENSGING 356

Query: 1153 SKG---KTDVNDLNGTPL----QSRIPAFGSLYYEPPQLENCDIPLSSTLSDTYYSFQKM 1311
            +      T+  D++ T L        P  GSL YEPPQL+   +P+ S L   Y   Q  
Sbjct: 357  NSNFEHCTNNGDMSSTRLIGTSSQESPTCGSLCYEPPQLDG-SVPIDS-LYLNYICQQNE 414

Query: 1312 YSTNLDMSPSSFATPPRVEEPGFGTLNAESVLRNAAKSFTNTPSILRKRK--AESLGVLP 1485
            Y  +  MSP  F TPPRV+     T   ES+L+ AA +F NTPSILR+RK  A++L    
Sbjct: 415  YCPSPTMSPIGFFTPPRVKGSQLCTETPESILKKAANTFPNTPSILRRRKTGAQTL---- 470

Query: 1486 LNRVGKTKVIEVLDSSHTPEEKERTENNQDKIGYEKARLCQSPAFCGNRTTELYDEKDFN 1665
                  +KV++V ++ HT     +TE   D  G       +SPA  GN   ++ + K FN
Sbjct: 471  ---TSPSKVLKVDNNPHT----SKTERTDDDSG--SGHFSRSPASHGN-GIDIPNNKAFN 520

Query: 1666 ASPPYRLWSKRTAVFKSLDR--DFTLDRGK 1749
            ASPPYRL SKRTA+ KS+++  +F  D+ K
Sbjct: 521  ASPPYRLRSKRTAIVKSVEKQLEFAFDKEK 550


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