BLASTX nr result

ID: Coptis25_contig00022432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis25_contig00022432
         (1009 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30297.3| unnamed protein product [Vitis vinifera]              222   1e-55
emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]   219   8e-55
ref|XP_002528749.1| conserved hypothetical protein [Ricinus comm...   193   6e-47
ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|2...   177   4e-42
ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|2...   176   1e-41

>emb|CBI30297.3| unnamed protein product [Vitis vinifera]
          Length = 461

 Score =  222 bits (565), Expect = 1e-55
 Identities = 127/281 (45%), Positives = 175/281 (62%), Gaps = 21/281 (7%)
 Frame = +2

Query: 2   TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 169
           TS++YHRRDLAT L T KWQLEDFERAV+LSA    S +REDV+SRH+ FIRAI++Q+  
Sbjct: 52  TSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAIREQIVH 111

Query: 170 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 313
           V           S RNT  INLNE+D+DGLALFLS  +P + +  Y+  DS+++RRFLD 
Sbjct: 112 VEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTILRRFLDP 171

Query: 314 TKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETV 484
              S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +  FE  
Sbjct: 172 VTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAP 231

Query: 485 ISIEDSSKNTQG--GSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMA 658
            +++D++    G  GSW+LE   +  K+ F K+  RG  +R+ +F FL N+W AYG +++
Sbjct: 232 EALQDTAGGKHGGDGSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVS 290

Query: 659 KSFAKRRKDGEVIGDFDQNPSSSYADILQAEQGTYSWMGFA 781
           ++F KR KDGE     +Q+ S S  D+     G  + M  A
Sbjct: 291 RNFTKRLKDGE-----EQSHSPSQMDVSHGAPGHQARMRLA 326


>emb|CAN62761.1| hypothetical protein VITISV_021811 [Vitis vinifera]
          Length = 346

 Score =  219 bits (558), Expect = 8e-55
 Identities = 124/267 (46%), Positives = 170/267 (63%), Gaps = 21/267 (7%)
 Frame = +2

Query: 2   TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 169
           TS++YHRRDLAT L T KWQLEDFERAV+LSA    S +REDV+SRH+ FIRAI++Q+  
Sbjct: 52  TSIEYHRRDLATTLETAKWQLEDFERAVSLSAATDKSRMREDVISRHKQFIRAIREQIVH 111

Query: 170 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 313
           V           S RNT  INLNE+D+DGLALFLS  +P + +  Y+  DS+++RRFLD 
Sbjct: 112 VEKSLLDSSMGNSVRNTEWINLNEQDRDGLALFLSGQDPTEQVPRYEKEDSTILRRFLDP 171

Query: 314 TKPSGFN---DEIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETV 484
              S +N   DEI+E +T E E+      MH+DH F + KE KLR V S+Y  +  FE  
Sbjct: 172 VTTSSYNDSTDEIVEQKTRESENLNMARAMHVDHDFKSSKEGKLRNVGSHYPAQLSFEAP 231

Query: 485 ISIEDSSKNTQGG--SWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMA 658
            ++ D++    GG  SW+LE   +  K+ F K+  RG  +R+ +F FL N+W AYG +++
Sbjct: 232 EALXDTAGGKHGGDXSWDLEADGAKDKSFFHKDG-RGYHNRMGIFCFLANLWPAYGSRVS 290

Query: 659 KSFAKRRKDGEVIGDFDQNPSSSYADI 739
           ++F KR KDGE     +Q+ S S  D+
Sbjct: 291 RNFTKRLKDGE-----EQSHSPSQMDV 312


>ref|XP_002528749.1| conserved hypothetical protein [Ricinus communis]
           gi|223531843|gb|EEF33661.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 380

 Score =  193 bits (490), Expect = 6e-47
 Identities = 122/272 (44%), Positives = 161/272 (59%), Gaps = 19/272 (6%)
 Frame = +2

Query: 5   SLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQV 172
           S++YHRRDLAT L T KWQLEDFERAV  SA    S  REDV+SRHR FIRAI++QV  V
Sbjct: 53  SIEYHRRDLATILETAKWQLEDFERAVHFSAVQDKSRSREDVISRHRQFIRAIREQVNHV 112

Query: 173 -----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDST 316
                      S RNT   NLNE+D+DGLALFL  GN       Y+  DSS++RRFLD T
Sbjct: 113 ENSVAGPALGDSMRNTEWGNLNEQDRDGLALFLIGGNTAGHSNHYEMEDSSILRRFLDPT 172

Query: 317 KPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVISI 493
             S   D EI+E  + E E  + +G +  D S    K++  +K+ S+Y TR G +    +
Sbjct: 173 SASSLTDNEIVEHGSVEFEKLKLSGNVQADDSAS--KDDYFKKLGSHYTTRLGSD----L 226

Query: 494 EDSSKNT--QGGSWELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKSF 667
           +D S N    GG W+LE  ++  KN+F +N  R   SR++ F FL N+W  +G K+ KS+
Sbjct: 227 QDISCNRPGDGGHWDLEADEATPKNVFHENSSR--YSRMNFFGFLNNLWKMWGTKVTKSY 284

Query: 668 AKRRKDGEVIGDFDQNPSSSYADILQAEQGTY 763
            KR KDGE     +Q  S +Y D+  + QG +
Sbjct: 285 IKRLKDGE-----EQRHSPTYIDVSYSAQGQH 311


>ref|XP_002305863.1| predicted protein [Populus trichocarpa] gi|222848827|gb|EEE86374.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  177 bits (449), Expect = 4e-42
 Identities = 102/249 (40%), Positives = 153/249 (61%), Gaps = 19/249 (7%)
 Frame = +2

Query: 2   TSLDYHRRDLATALGTTKWQLEDFERA----VTLSASNVREDVLSRHRHFIRAIQDQVFQ 169
           +S++YH+RDLAT LGT KWQLEDFERA    +  + S  REDV+SRHR FI AI++ + +
Sbjct: 52  SSIEYHKRDLATILGTAKWQLEDFERAANSSIIANKSQTREDVISRHRQFIMAIREHINE 111

Query: 170 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 313
           V           S RN+  +NLN+ ++D LA FL+ GNP + L  Y+  +S  +RRFLD 
Sbjct: 112 VEKGVKGPSMGDSMRNSEWVNLNDHERDLLASFLTGGNPKEHLNHYEMEESGYLRRFLDP 171

Query: 314 TKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVIS 490
              S   D EI+E  + E E  R NGV H +H  D+  E+K R + S+Y TR G + + S
Sbjct: 172 NLGSSLTDNEIVEHDSREFERVRINGVGHAEHYLDSANEDK-RNIGSHYTTRLGSDMMNS 230

Query: 491 IEDSSKNTQGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKS 664
           + ++S    GG   W+L+  ++ +++ F + K RG+ S +  F FL N+W  + +++A++
Sbjct: 231 LPENSHERHGGGDHWDLKANEAKSRSFFHEIKSRGTYS-IMFFGFLINLWSTHRNRIARN 289

Query: 665 FAKRRKDGE 691
           + KR KDGE
Sbjct: 290 YTKRLKDGE 298


>ref|XP_002301703.1| predicted protein [Populus trichocarpa] gi|222843429|gb|EEE80976.1|
           predicted protein [Populus trichocarpa]
          Length = 387

 Score =  176 bits (445), Expect = 1e-41
 Identities = 106/271 (39%), Positives = 159/271 (58%), Gaps = 19/271 (7%)
 Frame = +2

Query: 2   TSLDYHRRDLATALGTTKWQLEDFERAVTLSA----SNVREDVLSRHRHFIRAIQDQVFQ 169
           +S++YH+RDLAT LGT KWQLEDFERAV  S+    S  REDV+SRHR FI AI++ + +
Sbjct: 52  SSIEYHKRDLATILGTAKWQLEDFERAVNSSSIANKSQAREDVISRHRQFIIAIREHINE 111

Query: 170 V-----------SQRNTHLINLNEKDQDGLALFLSAGNPVDPLTEYD-SDSSVMRRFLDS 313
           V           S RN+  +NLN++D+D LA FL+ GNP + +  Y+  +SS++RRFLD 
Sbjct: 112 VEKSVKGRSMDDSMRNSEWVNLNDQDRDVLASFLTGGNPTENMHPYEMEESSILRRFLDP 171

Query: 314 TKPSGFND-EIIELRTEEIEDPRENGVMHIDHSFDNIKENKLRKVASNYFTRPGFETVIS 490
                  D EI+E  + E E  +  GV H DH  D+  E+K R VAS+  T  G + + S
Sbjct: 172 NSGVSLKDNEIVEHDSREFERVKMTGVGHADHYLDSANEDK-RNVASHNSTGLGSDMMNS 230

Query: 491 IEDSSKNTQGGS--WELENPDSNAKNIFSKNKLRGSRSRLDVFSFLGNMWYAYGDKMAKS 664
            ++   +   G   W+LE  ++ +++ F + K RG  S +  F FL N+W A+ +++ ++
Sbjct: 231 RQEIHHDRHVGDDHWDLEANEAKSRSFFHEIKSRGIYSIMIFFGFLSNLWTAHRNRVGRN 290

Query: 665 FAKRRKDGEVIGDFDQNPSSSYADILQAEQG 757
           + KR KDGE     +   S +Y +   + QG
Sbjct: 291 YTKRLKDGE-----EYRHSPTYTESSHSAQG 316


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